data_5DHH # _model_server_result.job_id PksscQ-nooDiNZjHhr5dBg _model_server_result.datetime_utc '2024-11-29 14:57:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5dhh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1202}' # _entry.id 5DHH # _exptl.entry_id 5DHH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.461 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'OLEIC ACID' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.5 _cell.angle_gamma 90 _cell.entry_id 5DHH _cell.length_a 42.3 _cell.length_b 168.941 _cell.length_c 65.472 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5DHH _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H 1 1 B,I,J,K,L 2 1 A,C,D,E,F,G,H 3 1 B,I,J,K,L 3 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 1_556 x,y,z+1 1 0 0 0 1 0 0 0 1 -15.284135 0 63.663003 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 I N N ? 2 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 197 A CYS 123 1_555 A SG CYS 274 A CYS 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf2 B SG CYS 197 B CYS 1187 1_555 B SG CYS 274 B CYS 1264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? # _chem_comp.formula 'C18 H34 O2' _chem_comp.formula_weight 282.461 _chem_comp.id OLA _chem_comp.mon_nstd_flag . _chem_comp.name 'OLEIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 OLA doub 295 n n C1 O2 OLA sing 296 n n C1 C2 OLA sing 297 n n O2 HO2 OLA sing 298 n n C2 C3 OLA sing 299 n n C2 H21 OLA sing 300 n n C2 H22 OLA sing 301 n n C3 C4 OLA sing 302 n n C3 H31 OLA sing 303 n n C3 H32 OLA sing 304 n n C4 C5 OLA sing 305 n n C4 H41 OLA sing 306 n n C4 H42 OLA sing 307 n n C5 C6 OLA sing 308 n n C5 H51 OLA sing 309 n n C5 H52 OLA sing 310 n n C6 C7 OLA sing 311 n n C6 H61 OLA sing 312 n n C6 H62 OLA sing 313 n n C7 C8 OLA sing 314 n n C7 H71 OLA sing 315 n n C7 H72 OLA sing 316 n n C8 C9 OLA sing 317 n n C8 H81 OLA sing 318 n n C8 H82 OLA sing 319 n n C9 C10 OLA doub 320 z n C9 H9 OLA sing 321 n n C10 C11 OLA sing 322 n n C10 H10 OLA sing 323 n n C11 C12 OLA sing 324 n n C11 H111 OLA sing 325 n n C11 H112 OLA sing 326 n n C12 C13 OLA sing 327 n n C12 H121 OLA sing 328 n n C12 H122 OLA sing 329 n n C13 C14 OLA sing 330 n n C13 H131 OLA sing 331 n n C13 H132 OLA sing 332 n n C14 C15 OLA sing 333 n n C14 H141 OLA sing 334 n n C14 H142 OLA sing 335 n n C15 C16 OLA sing 336 n n C15 H151 OLA sing 337 n n C15 H152 OLA sing 338 n n C16 C17 OLA sing 339 n n C16 H161 OLA sing 340 n n C16 H162 OLA sing 341 n n C17 C18 OLA sing 342 n n C17 H171 OLA sing 343 n n C17 H172 OLA sing 344 n n C18 H181 OLA sing 345 n n C18 H182 OLA sing 346 n n C18 H183 OLA sing 347 n n # _atom_sites.entry_id 5DHH _atom_sites.fract_transf_matrix[1][1] 0.023641 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005675 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005919 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015708 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 OLA A 1 1201 4 OLA OLA . D 2 OLA A 1 1202 5 OLA OLA . E 2 OLA A 1 1203 6 OLA OLA . F 2 OLA A 1 1204 9 OLA OLA . G 2 OLA A 1 1205 10 OLA OLA . H 3 DGW A 1 1206 2 DGW DGW . I 2 OLA B 1 1501 8 OLA OLA . J 2 OLA B 1 1502 11 OLA OLA . K 3 DGW B 1 1503 1 DGW DGW . L 4 OLC B 1 1504 1 OLC OLC . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 OLA . . . D 2 8.753 23.181 -8.34 1 86.72 ? C1 OLA 1202 A 1 HETATM 2 O O1 OLA . . . D 2 8.404 22.813 -9.483 1 86.27 ? O1 OLA 1202 A 1 HETATM 3 O O2 OLA . . . D 2 9.146 22.323 -7.52 1 91.02 ? O2 OLA 1202 A 1 HETATM 4 C C2 OLA . . . D 2 8.699 24.64 -7.955 1 81.57 ? C2 OLA 1202 A 1 HETATM 5 C C3 OLA . . . D 2 7.444 25.273 -8.543 1 80.7 ? C3 OLA 1202 A 1 HETATM 6 C C4 OLA . . . D 2 7.379 26.764 -8.233 1 79.72 ? C4 OLA 1202 A 1 HETATM 7 C C5 OLA . . . D 2 6.678 27.017 -6.903 1 78.47 ? C5 OLA 1202 A 1 HETATM 8 C C6 OLA . . . D 2 6.317 28.488 -6.733 1 76.52 ? C6 OLA 1202 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 28 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 8 #