data_5DHH
#
_model_server_result.job_id            J9v6Cm9Pgouf3y_DlNXsfA 
_model_server_result.datetime_utc      '2024-11-26 02:28:02' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5dhh 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":1206}' 
#
_entry.id    5DHH 
#
_exptl.entry_id    5DHH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              418.399 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (5S,7S)-7-{[4-(2,6-dichlorophenyl)piperidin-1-yl]methyl}-1-methyl-6,7,8,9-tetrahydro-5H-benzo[7]annulen-5-ol 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          103.5 
_cell.angle_gamma         90 
_cell.entry_id            5DHH 
_cell.length_a            42.3 
_cell.length_b            168.941 
_cell.length_c            65.472 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5DHH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
PISA dimeric 2 software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H 1 1 
B,I,J,K,L 2 1 
A,C,D,E,F,G,H 3 1 
B,I,J,K,L 3 2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 1_556 x,y,z+1 1 0 0 0 1 0 0 0 1 -15.284135 0 63.663003 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 H N N 
? 3 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 197 A CYS 123 1_555 A SG CYS 274 A CYS 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf2 B SG CYS 197 B CYS 1187 1_555 B SG CYS 274 B CYS 1264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
#
_chem_comp.formula           'C24 H29 Cl2 N O' 
_chem_comp.formula_weight    418.399 
_chem_comp.id                DGW 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (5S,7S)-7-{[4-(2,6-dichlorophenyl)piperidin-1-yl]methyl}-1-methyl-6,7,8,9-tetrahydro-5H-benzo[7]annulen-5-ol 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAA CAS DGW sing 83 n n 
CAG CAS DGW doub 84 n y 
CAG CAF DGW sing 85 n y 
CAS CAW DGW sing 86 n y 
CAF CAJ DGW doub 87 n y 
CAW CAK DGW sing 88 n n 
CAW CAV DGW doub 89 n y 
CAJ CAV DGW sing 90 n y 
CAK CAL DGW sing 91 n n 
CAV CAY DGW sing 92 n n 
CAL CAZ DGW sing 93 n n 
CAY OAB DGW sing 94 n n 
CAY CAQ DGW sing 95 n n 
CAQ CAZ DGW sing 96 n n 
CAZ CAR DGW sing 97 n n 
CAR NBB DGW sing 98 n n 
NBB CAO DGW sing 99 n n 
NBB CAP DGW sing 100 n n 
CAO CAM DGW sing 101 n n 
CAP CAN DGW sing 102 n n 
CAM CBA DGW sing 103 n n 
CAN CBA DGW sing 104 n n 
CBA CAX DGW sing 105 n n 
CLAD CAU DGW sing 106 n n 
CAX CAU DGW doub 107 n y 
CAX CAT DGW sing 108 n y 
CAU CAI DGW sing 109 n y 
CLAC CAT DGW sing 110 n n 
CAT CAH DGW doub 111 n y 
CAI CAE DGW doub 112 n y 
CAH CAE DGW sing 113 n y 
CAH H1 DGW sing 114 n n 
CAE H2 DGW sing 115 n n 
CAI H3 DGW sing 116 n n 
CBA H4 DGW sing 117 n n 
CAM H5 DGW sing 118 n n 
CAM H6 DGW sing 119 n n 
CAO H7 DGW sing 120 n n 
CAO H8 DGW sing 121 n n 
CAN H9 DGW sing 122 n n 
CAN H10 DGW sing 123 n n 
CAP H11 DGW sing 124 n n 
CAP H12 DGW sing 125 n n 
CAR H14 DGW sing 126 n n 
CAR H15 DGW sing 127 n n 
CAZ H16 DGW sing 128 n n 
CAQ H17 DGW sing 129 n n 
CAQ H18 DGW sing 130 n n 
CAY H19 DGW sing 131 n n 
OAB H20 DGW sing 132 n n 
CAJ H21 DGW sing 133 n n 
CAF H22 DGW sing 134 n n 
CAG H23 DGW sing 135 n n 
CAA H24 DGW sing 136 n n 
CAA H25 DGW sing 137 n n 
CAA H26 DGW sing 138 n n 
CAK H27 DGW sing 139 n n 
CAK H28 DGW sing 140 n n 
CAL H29 DGW sing 141 n n 
CAL H30 DGW sing 142 n n 
#
_atom_sites.entry_id                     5DHH 
_atom_sites.fract_transf_matrix[1][1]    0.023641 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.005675 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005919 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015708 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 OLA A 1 1201 4 OLA OLA . 
D 2 OLA A 1 1202 5 OLA OLA . 
E 2 OLA A 1 1203 6 OLA OLA . 
F 2 OLA A 1 1204 9 OLA OLA . 
G 2 OLA A 1 1205 10 OLA OLA . 
H 3 DGW A 1 1206 2 DGW DGW . 
I 2 OLA B 1 1501 8 OLA OLA . 
J 2 OLA B 1 1502 11 OLA OLA . 
K 3 DGW B 1 1503 1 DGW DGW . 
L 4 OLC B 1 1504 1 OLC OLC . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 CL CLAC DGW . . . H 3 -12.118 31.211 2.501 1 104.4 ? CLAC DGW 1206 A 1 
HETATM 2 C CAT DGW . . . H 3 -10.435 31.404 2.702 1 95.04 ? CAT DGW 1206 A 1 
HETATM 3 C CAH DGW . . . H 3 -9.974 31.808 3.947 1 86.79 ? CAH DGW 1206 A 1 
HETATM 4 C CAE DGW . . . H 3 -8.617 31.986 4.158 1 80.18 ? CAE DGW 1206 A 1 
HETATM 5 C CAI DGW . . . H 3 -7.727 31.752 3.124 1 79.33 ? CAI DGW 1206 A 1 
HETATM 6 C CAU DGW . . . H 3 -8.168 31.347 1.872 1 91.37 ? CAU DGW 1206 A 1 
HETATM 7 CL CLAD DGW . . . H 3 -6.892 31.099 0.672 1 104.9 ? CLAD DGW 1206 A 1 
HETATM 8 C CAX DGW . . . H 3 -9.55 31.163 1.649 1 81.54 ? CAX DGW 1206 A 1 
HETATM 9 C CBA DGW . . . H 3 -10.074 30.76 0.4 1 63.53 ? CBA DGW 1206 A 1 
HETATM 10 C CAM DGW . . . H 3 -9.652 31.664 -0.715 1 53.43 ? CAM DGW 1206 A 1 
HETATM 11 C CAO DGW . . . H 3 -10.223 31.218 -2.044 1 43.69 ? CAO DGW 1206 A 1 
HETATM 12 C CAN DGW . . . H 3 -9.709 29.303 0.055 1 55.89 ? CAN DGW 1206 A 1 
HETATM 13 C CAP DGW . . . H 3 -10.311 28.959 -1.313 1 51.61 ? CAP DGW 1206 A 1 
HETATM 14 N NBB DGW . . . H 3 -9.77 29.859 -2.361 1 42.48 ? NBB DGW 1206 A 1 
HETATM 15 C CAR DGW . . . H 3 -10.354 29.543 -3.676 1 42.86 ? CAR DGW 1206 A 1 
HETATM 16 C CAZ DGW . . . H 3 -10.066 28.199 -4.36 1 45.53 ? CAZ DGW 1206 A 1 
HETATM 17 C CAQ DGW . . . H 3 -8.552 28.063 -4.385 1 52.44 ? CAQ DGW 1206 A 1 
HETATM 18 C CAY DGW . . . H 3 -7.948 26.793 -5.024 1 59.47 ? CAY DGW 1206 A 1 
HETATM 19 O OAB DGW . . . H 3 -6.527 26.726 -4.81 1 69.16 ? OAB DGW 1206 A 1 
HETATM 20 C CAV DGW . . . H 3 -8.266 26.602 -6.376 1 55.81 ? CAV DGW 1206 A 1 
HETATM 21 C CAJ DGW . . . H 3 -7.115 26.179 -7.03 1 52.19 ? CAJ DGW 1206 A 1 
HETATM 22 C CAF DGW . . . H 3 -7.112 25.92 -8.393 1 46.21 ? CAF DGW 1206 A 1 
HETATM 23 C CAG DGW . . . H 3 -8.276 26.092 -9.131 1 45.5 ? CAG DGW 1206 A 1 
HETATM 24 C CAS DGW . . . H 3 -9.437 26.524 -8.496 1 54.23 ? CAS DGW 1206 A 1 
HETATM 25 C CAA DGW . . . H 3 -10.605 26.692 -9.255 1 52.48 ? CAA DGW 1206 A 1 
HETATM 26 C CAW DGW . . . H 3 -9.43 26.784 -7.117 1 58.64 ? CAW DGW 1206 A 1 
HETATM 27 C CAK DGW . . . H 3 -10.686 27.198 -6.706 1 57.31 ? CAK DGW 1206 A 1 
HETATM 28 C CAL DGW . . . H 3 -10.747 28.353 -5.721 1 49.04 ? CAL DGW 1206 A 1 
#
_model_server_stats.io_time_ms              63 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           336 
_model_server_stats.encode_time_ms          16 
_model_server_stats.element_count           28 
#