data_5DHJ # _model_server_result.job_id 1mQ-3n6d6qlL9RU0a5sREA _model_server_result.datetime_utc '2024-12-03 09:52:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5dhj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 5DHJ # _exptl.entry_id 5DHJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 210.235 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-methyl-5-(pyridin-3-yl)-2H-pyrazolo[3,4-c]pyridine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5DHJ _cell.length_a 97.732 _cell.length_b 97.732 _cell.length_c 80.839 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5DHJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C12 H10 N4' _chem_comp.formula_weight 210.235 _chem_comp.id 5E5 _chem_comp.mon_nstd_flag . _chem_comp.name 3-methyl-5-(pyridin-3-yl)-2H-pyrazolo[3,4-c]pyridine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C13 C12 5E5 doub 1 n y C13 C14 5E5 sing 2 n y C1 C2 5E5 sing 3 n n C12 C11 5E5 sing 4 n y C14 N15 5E5 doub 5 n y C7 C6 5E5 sing 6 n y C7 C8 5E5 doub 7 n y C2 C6 5E5 doub 8 n y C2 N3 5E5 sing 9 n y C11 C8 5E5 sing 10 n n C11 C16 5E5 doub 11 n y C6 C5 5E5 sing 12 n y N15 C16 5E5 sing 13 n y C8 N9 5E5 sing 14 n y N3 N4 5E5 sing 15 n y C5 N4 5E5 doub 16 n y C5 C10 5E5 sing 17 n y N9 C10 5E5 doub 18 n y C7 H1 5E5 sing 19 n n C10 H2 5E5 sing 20 n n N3 H3 5E5 sing 21 n n C1 H4 5E5 sing 22 n n C1 H5 5E5 sing 23 n n C1 H6 5E5 sing 24 n n C12 H7 5E5 sing 25 n n C13 H8 5E5 sing 26 n n C14 H9 5E5 sing 27 n n C16 H10 5E5 sing 28 n n # _atom_sites.entry_id 5DHJ _atom_sites.fract_transf_matrix[1][1] 0.010232 _atom_sites.fract_transf_matrix[1][2] 0.005907 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011815 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01237 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 5E5 A 1 401 1 5E5 ZZZ . C 3 PO4 A 1 402 1 PO4 PO4 . D 3 PO4 A 1 403 1 PO4 PO4 . E 4 HOH A 1 501 35 HOH HOH . E 4 HOH A 2 502 40 HOH HOH . E 4 HOH A 3 503 6 HOH HOH . E 4 HOH A 4 504 11 HOH HOH . E 4 HOH A 5 505 12 HOH HOH . E 4 HOH A 6 506 42 HOH HOH . E 4 HOH A 7 507 1 HOH HOH . E 4 HOH A 8 508 19 HOH HOH . E 4 HOH A 9 509 26 HOH HOH . E 4 HOH A 10 510 45 HOH HOH . E 4 HOH A 11 511 21 HOH HOH . E 4 HOH A 12 512 20 HOH HOH . E 4 HOH A 13 513 2 HOH HOH . E 4 HOH A 14 514 33 HOH HOH . E 4 HOH A 15 515 3 HOH HOH . E 4 HOH A 16 516 43 HOH HOH . E 4 HOH A 17 517 27 HOH HOH . E 4 HOH A 18 518 9 HOH HOH . E 4 HOH A 19 519 58 HOH HOH . E 4 HOH A 20 520 4 HOH HOH . E 4 HOH A 21 521 57 HOH HOH . E 4 HOH A 22 522 7 HOH HOH . E 4 HOH A 23 523 36 HOH HOH . E 4 HOH A 24 524 28 HOH HOH . E 4 HOH A 25 525 41 HOH HOH . E 4 HOH A 26 526 59 HOH HOH . E 4 HOH A 27 527 17 HOH HOH . E 4 HOH A 28 528 5 HOH HOH . E 4 HOH A 29 529 34 HOH HOH . E 4 HOH A 30 530 15 HOH HOH . E 4 HOH A 31 531 31 HOH HOH . E 4 HOH A 32 532 54 HOH HOH . E 4 HOH A 33 533 56 HOH HOH . E 4 HOH A 34 534 14 HOH HOH . E 4 HOH A 35 535 49 HOH HOH . E 4 HOH A 36 536 32 HOH HOH . E 4 HOH A 37 537 25 HOH HOH . E 4 HOH A 38 538 24 HOH HOH . E 4 HOH A 39 539 52 HOH HOH . E 4 HOH A 40 540 38 HOH HOH . E 4 HOH A 41 541 22 HOH HOH . E 4 HOH A 42 542 8 HOH HOH . E 4 HOH A 43 543 16 HOH HOH . E 4 HOH A 44 544 23 HOH HOH . E 4 HOH A 45 545 10 HOH HOH . E 4 HOH A 46 546 47 HOH HOH . E 4 HOH A 47 547 18 HOH HOH . E 4 HOH A 48 548 29 HOH HOH . E 4 HOH A 49 549 37 HOH HOH . E 4 HOH A 50 550 13 HOH HOH . E 4 HOH A 51 551 30 HOH HOH . E 4 HOH A 52 552 51 HOH HOH . E 4 HOH A 53 553 48 HOH HOH . E 4 HOH A 54 554 50 HOH HOH . E 4 HOH A 55 555 44 HOH HOH . E 4 HOH A 56 556 39 HOH HOH . E 4 HOH A 57 557 46 HOH HOH . E 4 HOH A 58 558 53 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C7 5E5 . . . B 2 22.575 35.448 0.375 1 33.82 ? C7 5E5 401 A 1 HETATM 2 C C2 5E5 . . . B 2 23.427 37.94 0.544 1 34.55 ? C2 5E5 401 A 1 HETATM 3 C C10 5E5 . . . B 2 22.89 35.489 3.117 1 33.58 ? C10 5E5 401 A 1 HETATM 4 N N3 5E5 . . . B 2 23.788 38.647 1.585 1 39.18 ? N3 5E5 401 A 1 HETATM 5 C C6 5E5 . . . B 2 23.033 36.64 0.986 1 33 ? C6 5E5 401 A 1 HETATM 6 C C1 5E5 . . . B 2 23.471 38.453 -0.882 1 26.81 ? C1 5E5 401 A 1 HETATM 7 N N4 5E5 . . . B 2 23.651 37.883 2.757 1 41.49 ? N4 5E5 401 A 1 HETATM 8 C C5 5E5 . . . B 2 23.193 36.639 2.397 1 34.85 ? C5 5E5 401 A 1 HETATM 9 C C8 5E5 . . . B 2 22.303 34.344 1.193 1 36.75 ? C8 5E5 401 A 1 HETATM 10 N N9 5E5 . . . B 2 22.471 34.402 2.511 1 33.39 ? N9 5E5 401 A 1 HETATM 11 C C11 5E5 . . . B 2 21.829 33.045 0.655 1 33.65 ? C11 5E5 401 A 1 HETATM 12 C C12 5E5 . . . B 2 21.914 32.744 -0.713 1 30.51 ? C12 5E5 401 A 1 HETATM 13 C C13 5E5 . . . B 2 21.463 31.495 -1.135 1 36.45 ? C13 5E5 401 A 1 HETATM 14 C C14 5E5 . . . B 2 20.95 30.606 -0.198 1 36.37 ? C14 5E5 401 A 1 HETATM 15 N N15 5E5 . . . B 2 20.895 30.917 1.091 1 37.19 ? N15 5E5 401 A 1 HETATM 16 C C16 5E5 . . . B 2 21.31 32.089 1.539 1 30.79 ? C16 5E5 401 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 239 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 16 #