data_5DHS
#
_model_server_result.job_id            Z1s61_TUqippdKU3kZaurA 
_model_server_result.datetime_utc      '2024-11-12 21:13:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5dhs 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":301}' 
#
_entry.id    5DHS 
#
_exptl.entry_id    5DHS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              192.124 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CITRIC ACID' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          100.14 
_cell.angle_gamma         90 
_cell.entry_id            5DHS 
_cell.length_a            66.77 
_cell.length_b            118.95 
_cell.length_c            66.9 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5DHS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 H N N 
#
_chem_comp.formula           'C6 H8 O7' 
_chem_comp.formula_weight    192.124 
_chem_comp.id                CIT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CITRIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 CIT doub 132 n n 
C1 O2 CIT sing 133 n n 
C1 C2 CIT sing 134 n n 
O2 HO2 CIT sing 135 n n 
C2 C3 CIT sing 136 n n 
C2 H21 CIT sing 137 n n 
C2 H22 CIT sing 138 n n 
C3 O7 CIT sing 139 n n 
C3 C4 CIT sing 140 n n 
C3 C6 CIT sing 141 n n 
O7 HO7 CIT sing 142 n n 
C4 C5 CIT sing 143 n n 
C4 H41 CIT sing 144 n n 
C4 H42 CIT sing 145 n n 
C5 O3 CIT doub 146 n n 
C5 O4 CIT sing 147 n n 
O4 HO4 CIT sing 148 n n 
C6 O5 CIT doub 149 n n 
C6 O6 CIT sing 150 n n 
O6 HO6 CIT sing 151 n n 
#
_atom_sites.entry_id                     5DHS 
_atom_sites.fract_transf_matrix[1][1]    0.014977 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002679 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008407 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015185 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 CIT A 1 301 3 CIT CIT . 
F 3 GOL A 1 302 1 GOL GOL . 
G 4 5AG A 1 303 1 5AG PDB . 
H 2 CIT B 1 301 2 CIT CIT . 
I 4 5AG B 1 302 1 5AG PDB . 
J 4 5AG C 1 301 1 5AG PDB . 
K 4 5AG D 1 301 1 5AG PDB . 
L 5 HOH A 1 401 154 HOH HOH . 
L 5 HOH A 2 402 133 HOH HOH . 
L 5 HOH A 3 403 62 HOH HOH . 
L 5 HOH A 4 404 7 HOH HOH . 
L 5 HOH A 5 405 6 HOH HOH . 
L 5 HOH A 6 406 34 HOH HOH . 
L 5 HOH A 7 407 82 HOH HOH . 
L 5 HOH A 8 408 172 HOH HOH . 
L 5 HOH A 9 409 30 HOH HOH . 
L 5 HOH A 10 410 56 HOH HOH . 
L 5 HOH A 11 411 75 HOH HOH . 
L 5 HOH A 12 412 13 HOH HOH . 
L 5 HOH A 13 413 92 HOH HOH . 
L 5 HOH A 14 414 38 HOH HOH . 
L 5 HOH A 15 415 182 HOH HOH . 
L 5 HOH A 16 416 10 HOH HOH . 
L 5 HOH A 17 417 121 HOH HOH . 
L 5 HOH A 18 418 150 HOH HOH . 
L 5 HOH A 19 419 41 HOH HOH . 
L 5 HOH A 20 420 55 HOH HOH . 
L 5 HOH A 21 421 5 HOH HOH . 
L 5 HOH A 22 422 72 HOH HOH . 
L 5 HOH A 23 423 28 HOH HOH . 
L 5 HOH A 24 424 65 HOH HOH . 
L 5 HOH A 25 425 44 HOH HOH . 
L 5 HOH A 26 426 84 HOH HOH . 
L 5 HOH A 27 427 194 HOH HOH . 
L 5 HOH A 28 428 1 HOH HOH . 
L 5 HOH A 29 429 14 HOH HOH . 
L 5 HOH A 30 430 89 HOH HOH . 
L 5 HOH A 31 431 183 HOH HOH . 
L 5 HOH A 32 432 12 HOH HOH . 
L 5 HOH A 33 433 40 HOH HOH . 
L 5 HOH A 34 434 152 HOH HOH . 
L 5 HOH A 35 435 135 HOH HOH . 
L 5 HOH A 36 436 109 HOH HOH . 
L 5 HOH A 37 437 106 HOH HOH . 
L 5 HOH A 38 438 53 HOH HOH . 
L 5 HOH A 39 439 169 HOH HOH . 
L 5 HOH A 40 440 21 HOH HOH . 
L 5 HOH A 41 441 95 HOH HOH . 
L 5 HOH A 42 442 63 HOH HOH . 
L 5 HOH A 43 443 79 HOH HOH . 
L 5 HOH A 44 444 107 HOH HOH . 
L 5 HOH A 45 445 186 HOH HOH . 
L 5 HOH A 46 446 145 HOH HOH . 
L 5 HOH A 47 447 159 HOH HOH . 
L 5 HOH A 48 448 93 HOH HOH . 
L 5 HOH A 49 449 149 HOH HOH . 
L 5 HOH A 50 450 196 HOH HOH . 
L 5 HOH A 51 451 122 HOH HOH . 
L 5 HOH A 52 452 111 HOH HOH . 
L 5 HOH A 53 453 164 HOH HOH . 
L 5 HOH A 54 454 48 HOH HOH . 
M 5 HOH B 1 401 189 HOH HOH . 
M 5 HOH B 2 402 54 HOH HOH . 
M 5 HOH B 3 403 131 HOH HOH . 
M 5 HOH B 4 404 4 HOH HOH . 
M 5 HOH B 5 405 17 HOH HOH . 
M 5 HOH B 6 406 195 HOH HOH . 
M 5 HOH B 7 407 3 HOH HOH . 
M 5 HOH B 8 408 148 HOH HOH . 
M 5 HOH B 9 409 71 HOH HOH . 
M 5 HOH B 10 410 103 HOH HOH . 
M 5 HOH B 11 411 15 HOH HOH . 
M 5 HOH B 12 412 176 HOH HOH . 
M 5 HOH B 13 413 114 HOH HOH . 
M 5 HOH B 14 414 52 HOH HOH . 
M 5 HOH B 15 415 25 HOH HOH . 
M 5 HOH B 16 416 68 HOH HOH . 
M 5 HOH B 17 417 124 HOH HOH . 
M 5 HOH B 18 418 23 HOH HOH . 
M 5 HOH B 19 419 146 HOH HOH . 
M 5 HOH B 20 420 87 HOH HOH . 
M 5 HOH B 21 421 174 HOH HOH . 
M 5 HOH B 22 422 86 HOH HOH . 
M 5 HOH B 23 423 188 HOH HOH . 
M 5 HOH B 24 424 108 HOH HOH . 
M 5 HOH B 25 425 42 HOH HOH . 
M 5 HOH B 26 426 115 HOH HOH . 
M 5 HOH B 27 427 125 HOH HOH . 
M 5 HOH B 28 428 165 HOH HOH . 
M 5 HOH B 29 429 201 HOH HOH . 
M 5 HOH B 30 430 175 HOH HOH . 
M 5 HOH B 31 431 173 HOH HOH . 
M 5 HOH B 32 432 170 HOH HOH . 
N 5 HOH C 1 401 20 HOH HOH . 
N 5 HOH C 2 402 16 HOH HOH . 
N 5 HOH C 3 403 120 HOH HOH . 
N 5 HOH C 4 404 99 HOH HOH . 
N 5 HOH C 5 405 91 HOH HOH . 
N 5 HOH C 6 406 46 HOH HOH . 
N 5 HOH C 7 407 9 HOH HOH . 
N 5 HOH C 8 408 57 HOH HOH . 
N 5 HOH C 9 409 26 HOH HOH . 
N 5 HOH C 10 410 50 HOH HOH . 
N 5 HOH C 11 411 19 HOH HOH . 
N 5 HOH C 12 412 2 HOH HOH . 
N 5 HOH C 13 413 18 HOH HOH . 
N 5 HOH C 14 414 49 HOH HOH . 
N 5 HOH C 15 415 78 HOH HOH . 
N 5 HOH C 16 416 37 HOH HOH . 
N 5 HOH C 17 417 187 HOH HOH . 
N 5 HOH C 18 418 102 HOH HOH . 
N 5 HOH C 19 419 181 HOH HOH . 
N 5 HOH C 20 420 163 HOH HOH . 
N 5 HOH C 21 421 83 HOH HOH . 
N 5 HOH C 22 422 129 HOH HOH . 
N 5 HOH C 23 423 123 HOH HOH . 
N 5 HOH C 24 424 70 HOH HOH . 
N 5 HOH C 25 425 119 HOH HOH . 
N 5 HOH C 26 426 171 HOH HOH . 
N 5 HOH C 27 427 47 HOH HOH . 
N 5 HOH C 28 428 77 HOH HOH . 
N 5 HOH C 29 429 179 HOH HOH . 
N 5 HOH C 30 430 51 HOH HOH . 
N 5 HOH C 31 431 105 HOH HOH . 
N 5 HOH C 32 432 64 HOH HOH . 
N 5 HOH C 33 433 200 HOH HOH . 
N 5 HOH C 34 434 180 HOH HOH . 
N 5 HOH C 35 435 177 HOH HOH . 
N 5 HOH C 36 436 198 HOH HOH . 
N 5 HOH C 37 437 199 HOH HOH . 
O 5 HOH D 1 401 8 HOH HOH . 
O 5 HOH D 2 402 147 HOH HOH . 
O 5 HOH D 3 403 197 HOH HOH . 
O 5 HOH D 4 404 191 HOH HOH . 
O 5 HOH D 5 405 127 HOH HOH . 
O 5 HOH D 6 406 88 HOH HOH . 
O 5 HOH D 7 407 112 HOH HOH . 
O 5 HOH D 8 408 90 HOH HOH . 
O 5 HOH D 9 409 60 HOH HOH . 
O 5 HOH D 10 410 80 HOH HOH . 
O 5 HOH D 11 411 74 HOH HOH . 
O 5 HOH D 12 412 141 HOH HOH . 
O 5 HOH D 13 413 58 HOH HOH . 
O 5 HOH D 14 414 61 HOH HOH . 
O 5 HOH D 15 415 24 HOH HOH . 
O 5 HOH D 16 416 11 HOH HOH . 
O 5 HOH D 17 417 35 HOH HOH . 
O 5 HOH D 18 418 156 HOH HOH . 
O 5 HOH D 19 419 136 HOH HOH . 
O 5 HOH D 20 420 27 HOH HOH . 
O 5 HOH D 21 421 140 HOH HOH . 
O 5 HOH D 22 422 128 HOH HOH . 
O 5 HOH D 23 423 117 HOH HOH . 
O 5 HOH D 24 424 113 HOH HOH . 
O 5 HOH D 25 425 66 HOH HOH . 
O 5 HOH D 26 426 116 HOH HOH . 
O 5 HOH D 27 427 104 HOH HOH . 
O 5 HOH D 28 428 110 HOH HOH . 
O 5 HOH D 29 429 134 HOH HOH . 
O 5 HOH D 30 430 160 HOH HOH . 
O 5 HOH D 31 431 190 HOH HOH . 
O 5 HOH D 32 432 192 HOH HOH . 
O 5 HOH D 33 433 157 HOH HOH . 
O 5 HOH D 34 434 130 HOH HOH . 
O 5 HOH D 35 435 193 HOH HOH . 
O 5 HOH D 36 436 155 HOH HOH . 
O 5 HOH D 37 437 137 HOH HOH . 
O 5 HOH D 38 438 144 HOH HOH . 
O 5 HOH D 39 439 158 HOH HOH . 
O 5 HOH D 40 440 178 HOH HOH . 
O 5 HOH D 41 441 166 HOH HOH . 
O 5 HOH D 42 442 85 HOH HOH . 
O 5 HOH D 43 443 126 HOH HOH . 
O 5 HOH D 44 444 139 HOH HOH . 
O 5 HOH D 45 445 184 HOH HOH . 
O 5 HOH D 46 446 32 HOH HOH . 
O 5 HOH D 47 447 142 HOH HOH . 
O 5 HOH D 48 448 39 HOH HOH . 
O 5 HOH D 49 449 143 HOH HOH . 
O 5 HOH D 50 450 138 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 CIT . . . H 2 18.912 7.896 -27.279 0.8 64.66 ? C1 CIT 301 B 1 
HETATM 2 O O1 CIT . . . H 2 19.65 8.053 -28.276 0.8 65.59 ? O1 CIT 301 B 1 
HETATM 3 O O2 CIT . . . H 2 17.747 8.349 -27.311 0.8 66.88 ? O2 CIT 301 B 1 
HETATM 4 C C2 CIT . . . H 2 19.423 7.169 -26.059 0.8 62.67 ? C2 CIT 301 B 1 
HETATM 5 C C3 CIT . . . H 2 20.834 7.65 -25.73 0.8 63.6 ? C3 CIT 301 B 1 
HETATM 6 O O7 CIT . . . H 2 21.387 8.265 -26.922 0.8 55.76 ? O7 CIT 301 B 1 
HETATM 7 C C4 CIT . . . H 2 21.776 6.521 -25.318 0.8 65.8 ? C4 CIT 301 B 1 
HETATM 8 C C5 CIT . . . H 2 21.188 5.558 -24.308 0.8 66.06 ? C5 CIT 301 B 1 
HETATM 9 O O3 CIT . . . H 2 21.542 4.359 -24.318 0.8 66.36 ? O3 CIT 301 B 1 
HETATM 10 O O4 CIT . . . H 2 20.364 5.927 -23.442 0.8 66.73 ? O4 CIT 301 B 1 
HETATM 11 C C6 CIT . . . H 2 20.805 8.714 -24.645 0.8 66.27 ? C6 CIT 301 B 1 
HETATM 12 O O5 CIT . . . H 2 21.687 9.6 -24.599 0.8 68.24 ? O5 CIT 301 B 1 
HETATM 13 O O6 CIT . . . H 2 19.899 8.714 -23.784 0.8 63.03 ? O6 CIT 301 B 1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           318 
_model_server_stats.encode_time_ms          20 
_model_server_stats.element_count           13 
#