data_5DHU
#
_model_server_result.job_id            AZRquW1WoxNjDWhBIaEhnA 
_model_server_result.datetime_utc      '2025-01-10 14:21:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5dhu 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":301}' 
#
_entry.id    5DHU 
#
_exptl.entry_id    5DHU 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              192.124 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CITRIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          100.37 
_cell.angle_gamma         90 
_cell.entry_id            5DHU 
_cell.length_a            66.92 
_cell.length_b            119.34 
_cell.length_c            67.75 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5DHU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C6 H8 O7' 
_chem_comp.formula_weight    192.124 
_chem_comp.id                CIT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CITRIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 CIT doub 135 n n 
C1 O2 CIT sing 136 n n 
C1 C2 CIT sing 137 n n 
O2 HO2 CIT sing 138 n n 
C2 C3 CIT sing 139 n n 
C2 H21 CIT sing 140 n n 
C2 H22 CIT sing 141 n n 
C3 O7 CIT sing 142 n n 
C3 C4 CIT sing 143 n n 
C3 C6 CIT sing 144 n n 
O7 HO7 CIT sing 145 n n 
C4 C5 CIT sing 146 n n 
C4 H41 CIT sing 147 n n 
C4 H42 CIT sing 148 n n 
C5 O3 CIT doub 149 n n 
C5 O4 CIT sing 150 n n 
O4 HO4 CIT sing 151 n n 
C6 O5 CIT doub 152 n n 
C6 O6 CIT sing 153 n n 
O6 HO6 CIT sing 154 n n 
#
_atom_sites.entry_id                     5DHU 
_atom_sites.fract_transf_matrix[1][1]    0.014943 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002735 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008379 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015005 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 GOL A 1 301 1 GOL GOL . 
F 3 5A8 A 1 302 1 5A8 PDB . 
G 4 CIT B 1 301 2 CIT CIT . 
H 3 5A8 B 1 302 1 5A8 PDB . 
I 3 5A8 C 1 301 1 5A8 PDB . 
J 3 5A8 D 1 301 1 5A8 PDB . 
K 5 HOH A 1 401 165 HOH HOH . 
K 5 HOH A 2 402 172 HOH HOH . 
K 5 HOH A 3 403 105 HOH HOH . 
K 5 HOH A 4 404 176 HOH HOH . 
K 5 HOH A 5 405 17 HOH HOH . 
K 5 HOH A 6 406 22 HOH HOH . 
K 5 HOH A 7 407 7 HOH HOH . 
K 5 HOH A 8 408 8 HOH HOH . 
K 5 HOH A 9 409 71 HOH HOH . 
K 5 HOH A 10 410 11 HOH HOH . 
K 5 HOH A 11 411 216 HOH HOH . 
K 5 HOH A 12 412 223 HOH HOH . 
K 5 HOH A 13 413 47 HOH HOH . 
K 5 HOH A 14 414 42 HOH HOH . 
K 5 HOH A 15 415 54 HOH HOH . 
K 5 HOH A 16 416 1 HOH HOH . 
K 5 HOH A 17 417 67 HOH HOH . 
K 5 HOH A 18 418 32 HOH HOH . 
K 5 HOH A 19 419 13 HOH HOH . 
K 5 HOH A 20 420 70 HOH HOH . 
K 5 HOH A 21 421 12 HOH HOH . 
K 5 HOH A 22 422 164 HOH HOH . 
K 5 HOH A 23 423 83 HOH HOH . 
K 5 HOH A 24 424 52 HOH HOH . 
K 5 HOH A 25 425 40 HOH HOH . 
K 5 HOH A 26 426 80 HOH HOH . 
K 5 HOH A 27 427 203 HOH HOH . 
K 5 HOH A 28 428 159 HOH HOH . 
K 5 HOH A 29 429 148 HOH HOH . 
K 5 HOH A 30 430 16 HOH HOH . 
K 5 HOH A 31 431 88 HOH HOH . 
K 5 HOH A 32 432 225 HOH HOH . 
K 5 HOH A 33 433 82 HOH HOH . 
K 5 HOH A 34 434 201 HOH HOH . 
K 5 HOH A 35 435 74 HOH HOH . 
K 5 HOH A 36 436 171 HOH HOH . 
K 5 HOH A 37 437 132 HOH HOH . 
K 5 HOH A 38 438 199 HOH HOH . 
K 5 HOH A 39 439 6 HOH HOH . 
K 5 HOH A 40 440 124 HOH HOH . 
K 5 HOH A 41 441 36 HOH HOH . 
K 5 HOH A 42 442 96 HOH HOH . 
K 5 HOH A 43 443 24 HOH HOH . 
K 5 HOH A 44 444 235 HOH HOH . 
K 5 HOH A 45 445 127 HOH HOH . 
K 5 HOH A 46 446 25 HOH HOH . 
K 5 HOH A 47 447 167 HOH HOH . 
K 5 HOH A 48 448 58 HOH HOH . 
K 5 HOH A 49 449 29 HOH HOH . 
K 5 HOH A 50 450 218 HOH HOH . 
K 5 HOH A 51 451 226 HOH HOH . 
K 5 HOH A 52 452 20 HOH HOH . 
K 5 HOH A 53 453 114 HOH HOH . 
K 5 HOH A 54 454 136 HOH HOH . 
K 5 HOH A 55 455 234 HOH HOH . 
K 5 HOH A 56 456 236 HOH HOH . 
K 5 HOH A 57 457 160 HOH HOH . 
K 5 HOH A 58 458 212 HOH HOH . 
K 5 HOH A 59 459 190 HOH HOH . 
K 5 HOH A 60 460 137 HOH HOH . 
K 5 HOH A 61 461 206 HOH HOH . 
K 5 HOH A 62 462 139 HOH HOH . 
K 5 HOH A 63 463 138 HOH HOH . 
K 5 HOH A 64 464 219 HOH HOH . 
K 5 HOH A 65 465 119 HOH HOH . 
K 5 HOH A 66 466 115 HOH HOH . 
K 5 HOH A 67 467 140 HOH HOH . 
K 5 HOH A 68 468 113 HOH HOH . 
K 5 HOH A 69 469 214 HOH HOH . 
K 5 HOH A 70 470 213 HOH HOH . 
K 5 HOH A 71 471 200 HOH HOH . 
K 5 HOH A 72 472 73 HOH HOH . 
K 5 HOH A 73 473 198 HOH HOH . 
K 5 HOH A 74 474 221 HOH HOH . 
L 5 HOH B 1 401 46 HOH HOH . 
L 5 HOH B 2 402 232 HOH HOH . 
L 5 HOH B 3 403 87 HOH HOH . 
L 5 HOH B 4 404 5 HOH HOH . 
L 5 HOH B 5 405 18 HOH HOH . 
L 5 HOH B 6 406 197 HOH HOH . 
L 5 HOH B 7 407 146 HOH HOH . 
L 5 HOH B 8 408 4 HOH HOH . 
L 5 HOH B 9 409 196 HOH HOH . 
L 5 HOH B 10 410 242 HOH HOH . 
L 5 HOH B 11 411 30 HOH HOH . 
L 5 HOH B 12 412 93 HOH HOH . 
L 5 HOH B 13 413 243 HOH HOH . 
L 5 HOH B 14 414 185 HOH HOH . 
L 5 HOH B 15 415 77 HOH HOH . 
L 5 HOH B 16 416 76 HOH HOH . 
L 5 HOH B 17 417 72 HOH HOH . 
L 5 HOH B 18 418 134 HOH HOH . 
L 5 HOH B 19 419 21 HOH HOH . 
L 5 HOH B 20 420 112 HOH HOH . 
L 5 HOH B 21 421 106 HOH HOH . 
L 5 HOH B 22 422 37 HOH HOH . 
L 5 HOH B 23 423 154 HOH HOH . 
L 5 HOH B 24 424 220 HOH HOH . 
L 5 HOH B 25 425 147 HOH HOH . 
L 5 HOH B 26 426 163 HOH HOH . 
L 5 HOH B 27 427 85 HOH HOH . 
L 5 HOH B 28 428 175 HOH HOH . 
L 5 HOH B 29 429 195 HOH HOH . 
L 5 HOH B 30 430 211 HOH HOH . 
L 5 HOH B 31 431 228 HOH HOH . 
L 5 HOH B 32 432 187 HOH HOH . 
L 5 HOH B 33 433 184 HOH HOH . 
L 5 HOH B 34 434 222 HOH HOH . 
M 5 HOH C 1 401 28 HOH HOH . 
M 5 HOH C 2 402 173 HOH HOH . 
M 5 HOH C 3 403 61 HOH HOH . 
M 5 HOH C 4 404 56 HOH HOH . 
M 5 HOH C 5 405 81 HOH HOH . 
M 5 HOH C 6 406 31 HOH HOH . 
M 5 HOH C 7 407 9 HOH HOH . 
M 5 HOH C 8 408 19 HOH HOH . 
M 5 HOH C 9 409 51 HOH HOH . 
M 5 HOH C 10 410 97 HOH HOH . 
M 5 HOH C 11 411 245 HOH HOH . 
M 5 HOH C 12 412 59 HOH HOH . 
M 5 HOH C 13 413 75 HOH HOH . 
M 5 HOH C 14 414 94 HOH HOH . 
M 5 HOH C 15 415 35 HOH HOH . 
M 5 HOH C 16 416 10 HOH HOH . 
M 5 HOH C 17 417 66 HOH HOH . 
M 5 HOH C 18 418 27 HOH HOH . 
M 5 HOH C 19 419 2 HOH HOH . 
M 5 HOH C 20 420 181 HOH HOH . 
M 5 HOH C 21 421 116 HOH HOH . 
M 5 HOH C 22 422 224 HOH HOH . 
M 5 HOH C 23 423 14 HOH HOH . 
M 5 HOH C 24 424 39 HOH HOH . 
M 5 HOH C 25 425 60 HOH HOH . 
M 5 HOH C 26 426 23 HOH HOH . 
M 5 HOH C 27 427 104 HOH HOH . 
M 5 HOH C 28 428 125 HOH HOH . 
M 5 HOH C 29 429 186 HOH HOH . 
M 5 HOH C 30 430 33 HOH HOH . 
M 5 HOH C 31 431 109 HOH HOH . 
M 5 HOH C 32 432 244 HOH HOH . 
M 5 HOH C 33 433 62 HOH HOH . 
M 5 HOH C 34 434 141 HOH HOH . 
M 5 HOH C 35 435 107 HOH HOH . 
M 5 HOH C 36 436 152 HOH HOH . 
M 5 HOH C 37 437 233 HOH HOH . 
M 5 HOH C 38 438 118 HOH HOH . 
M 5 HOH C 39 439 227 HOH HOH . 
M 5 HOH C 40 440 151 HOH HOH . 
M 5 HOH C 41 441 208 HOH HOH . 
M 5 HOH C 42 442 64 HOH HOH . 
M 5 HOH C 43 443 126 HOH HOH . 
M 5 HOH C 44 444 237 HOH HOH . 
M 5 HOH C 45 445 135 HOH HOH . 
M 5 HOH C 46 446 63 HOH HOH . 
M 5 HOH C 47 447 150 HOH HOH . 
M 5 HOH C 48 448 149 HOH HOH . 
M 5 HOH C 49 449 128 HOH HOH . 
M 5 HOH C 50 450 153 HOH HOH . 
M 5 HOH C 51 451 161 HOH HOH . 
M 5 HOH C 52 452 182 HOH HOH . 
M 5 HOH C 53 453 143 HOH HOH . 
N 5 HOH D 1 401 191 HOH HOH . 
N 5 HOH D 2 402 3 HOH HOH . 
N 5 HOH D 3 403 43 HOH HOH . 
N 5 HOH D 4 404 79 HOH HOH . 
N 5 HOH D 5 405 183 HOH HOH . 
N 5 HOH D 6 406 68 HOH HOH . 
N 5 HOH D 7 407 41 HOH HOH . 
N 5 HOH D 8 408 101 HOH HOH . 
N 5 HOH D 9 409 15 HOH HOH . 
N 5 HOH D 10 410 55 HOH HOH . 
N 5 HOH D 11 411 241 HOH HOH . 
N 5 HOH D 12 412 120 HOH HOH . 
N 5 HOH D 13 413 89 HOH HOH . 
N 5 HOH D 14 414 229 HOH HOH . 
N 5 HOH D 15 415 102 HOH HOH . 
N 5 HOH D 16 416 95 HOH HOH . 
N 5 HOH D 17 417 49 HOH HOH . 
N 5 HOH D 18 418 69 HOH HOH . 
N 5 HOH D 19 419 99 HOH HOH . 
N 5 HOH D 20 420 129 HOH HOH . 
N 5 HOH D 21 421 144 HOH HOH . 
N 5 HOH D 22 422 133 HOH HOH . 
N 5 HOH D 23 423 246 HOH HOH . 
N 5 HOH D 24 424 247 HOH HOH . 
N 5 HOH D 25 425 170 HOH HOH . 
N 5 HOH D 26 426 194 HOH HOH . 
N 5 HOH D 27 427 131 HOH HOH . 
N 5 HOH D 28 428 166 HOH HOH . 
N 5 HOH D 29 429 155 HOH HOH . 
N 5 HOH D 30 430 204 HOH HOH . 
N 5 HOH D 31 431 205 HOH HOH . 
N 5 HOH D 32 432 145 HOH HOH . 
N 5 HOH D 33 433 156 HOH HOH . 
N 5 HOH D 34 434 53 HOH HOH . 
N 5 HOH D 35 435 193 HOH HOH . 
N 5 HOH D 36 436 123 HOH HOH . 
N 5 HOH D 37 437 122 HOH HOH . 
N 5 HOH D 38 438 188 HOH HOH . 
N 5 HOH D 39 439 230 HOH HOH . 
N 5 HOH D 40 440 209 HOH HOH . 
N 5 HOH D 41 441 215 HOH HOH . 
N 5 HOH D 42 442 192 HOH HOH . 
N 5 HOH D 43 443 240 HOH HOH . 
N 5 HOH D 44 444 239 HOH HOH . 
N 5 HOH D 45 445 169 HOH HOH . 
N 5 HOH D 46 446 217 HOH HOH . 
N 5 HOH D 47 447 231 HOH HOH . 
N 5 HOH D 48 448 238 HOH HOH . 
N 5 HOH D 49 449 178 HOH HOH . 
N 5 HOH D 50 450 142 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 CIT . . . G 4 21.545 4.985 -25.068 0.6 60.9 ? C1 CIT 301 B 1 
HETATM 2 O O1 CIT . . . G 4 21.572 3.735 -25.038 0.6 59.74 ? O1 CIT 301 B 1 
HETATM 3 O O2 CIT . . . G 4 21.055 5.604 -24.099 0.6 62.22 ? O2 CIT 301 B 1 
HETATM 4 C C2 CIT . . . G 4 22.094 5.723 -26.264 0.6 61.24 ? C2 CIT 301 B 1 
HETATM 5 C C3 CIT . . . G 4 21.13 6.813 -26.718 0.6 61.83 ? C3 CIT 301 B 1 
HETATM 6 O O7 CIT . . . G 4 20.084 6.961 -25.726 0.6 60.53 ? O7 CIT 301 B 1 
HETATM 7 C C4 CIT . . . G 4 20.523 6.477 -28.074 0.6 59.82 ? C4 CIT 301 B 1 
HETATM 8 C C5 CIT . . . G 4 19.027 6.289 -27.981 0.6 58.52 ? C5 CIT 301 B 1 
HETATM 9 O O3 CIT . . . G 4 18.405 5.738 -28.915 0.6 59.45 ? O3 CIT 301 B 1 
HETATM 10 O O4 CIT . . . G 4 18.387 6.684 -26.983 0.6 57.05 ? O4 CIT 301 B 1 
HETATM 11 C C6 CIT . . . G 4 21.896 8.12 -26.834 0.6 64.19 ? C6 CIT 301 B 1 
HETATM 12 O O5 CIT . . . G 4 21.857 8.769 -27.902 0.6 65.27 ? O5 CIT 301 B 1 
HETATM 13 O O6 CIT . . . G 4 22.587 8.55 -25.885 0.6 65.03 ? O6 CIT 301 B 1 
#
_model_server_stats.io_time_ms              22 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    25 
_model_server_stats.query_time_ms           307 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           13 
#