data_5DIE # _model_server_result.job_id OfQnTpWVCviS-i6jJbkd9A _model_server_result.datetime_utc '2024-10-12 16:36:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5die # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":601}' # _entry.id 5DIE # _exptl.entry_id 5DIE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 300.316 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (1S,3aR,5S,7aS)-7a-methyl-5-(2,3,5-trifluoro-4-hydroxyphenyl)octahydro-1H-inden-1-ol _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.35 _cell.angle_gamma 90 _cell.entry_id 5DIE _cell.length_a 56.137 _cell.length_b 84.053 _cell.length_c 58.536 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5DIE _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C16 H19 F3 O2' _chem_comp.formula_weight 300.316 _chem_comp.id 5CJ _chem_comp.mon_nstd_flag . _chem_comp.name (1S,3aR,5S,7aS)-7a-methyl-5-(2,3,5-trifluoro-4-hydroxyphenyl)octahydro-1H-inden-1-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C08 C15 5CJ sing 1 n n C08 C06 5CJ sing 2 n n O C15 5CJ sing 3 n n C15 C07 5CJ sing 4 n n C06 C13 5CJ sing 5 n n C13 C07 5CJ sing 6 n n C13 C05 5CJ sing 7 n n C07 C 5CJ sing 8 n n C07 C11 5CJ sing 9 n n C11 C14 5CJ sing 10 n n C05 C04 5CJ sing 11 n n C14 C04 5CJ sing 12 n n C04 C12 5CJ sing 13 n n F02 C10 5CJ sing 14 n n C12 C10 5CJ doub 15 n y C12 C03 5CJ sing 16 n y C10 C09 5CJ sing 17 n y C03 C01 5CJ doub 18 n y C09 F01 5CJ sing 19 n n C09 C02 5CJ doub 20 n y C01 C02 5CJ sing 21 n y C01 F 5CJ sing 22 n n C02 O01 5CJ sing 23 n n C H1 5CJ sing 24 n n C H2 5CJ sing 25 n n C H3 5CJ sing 26 n n O H4 5CJ sing 27 n n C03 H5 5CJ sing 28 n n C04 H6 5CJ sing 29 n n C05 H7 5CJ sing 30 n n C05 H8 5CJ sing 31 n n C06 H9 5CJ sing 32 n n C06 H10 5CJ sing 33 n n C08 H11 5CJ sing 34 n n C08 H12 5CJ sing 35 n n O01 H13 5CJ sing 36 n n C11 H14 5CJ sing 37 n n C11 H15 5CJ sing 38 n n C13 H16 5CJ sing 39 n n C14 H17 5CJ sing 40 n n C14 H18 5CJ sing 41 n n C15 H19 5CJ sing 42 n n # _atom_sites.entry_id 5DIE _atom_sites.fract_transf_matrix[1][1] 0.017814 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005908 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011897 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017999 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 5CJ A 1 601 1 5CJ UNK . F 3 5CJ B 1 601 1 5CJ UNK . G 4 HOH A 1 701 4 HOH HOH . G 4 HOH A 2 702 94 HOH HOH . G 4 HOH A 3 703 68 HOH HOH . G 4 HOH A 4 704 25 HOH HOH . G 4 HOH A 5 705 70 HOH HOH . G 4 HOH A 6 706 60 HOH HOH . G 4 HOH A 7 707 52 HOH HOH . G 4 HOH A 8 708 66 HOH HOH . G 4 HOH A 9 709 76 HOH HOH . G 4 HOH A 10 710 32 HOH HOH . G 4 HOH A 11 711 81 HOH HOH . G 4 HOH A 12 712 9 HOH HOH . G 4 HOH A 13 713 34 HOH HOH . G 4 HOH A 14 714 31 HOH HOH . G 4 HOH A 15 715 21 HOH HOH . G 4 HOH A 16 716 83 HOH HOH . G 4 HOH A 17 717 79 HOH HOH . G 4 HOH A 18 718 13 HOH HOH . G 4 HOH A 19 719 26 HOH HOH . G 4 HOH A 20 720 8 HOH HOH . G 4 HOH A 21 721 48 HOH HOH . G 4 HOH A 22 722 29 HOH HOH . G 4 HOH A 23 723 53 HOH HOH . G 4 HOH A 24 724 1 HOH HOH . G 4 HOH A 25 725 28 HOH HOH . G 4 HOH A 26 726 74 HOH HOH . G 4 HOH A 27 727 30 HOH HOH . G 4 HOH A 28 728 23 HOH HOH . G 4 HOH A 29 729 33 HOH HOH . G 4 HOH A 30 730 69 HOH HOH . G 4 HOH A 31 731 27 HOH HOH . G 4 HOH A 32 732 85 HOH HOH . G 4 HOH A 33 733 19 HOH HOH . G 4 HOH A 34 734 17 HOH HOH . G 4 HOH A 35 735 71 HOH HOH . G 4 HOH A 36 736 36 HOH HOH . G 4 HOH A 37 737 49 HOH HOH . G 4 HOH A 38 738 43 HOH HOH . G 4 HOH A 39 739 47 HOH HOH . G 4 HOH A 40 740 24 HOH HOH . G 4 HOH A 41 741 40 HOH HOH . G 4 HOH A 42 742 73 HOH HOH . G 4 HOH A 43 743 72 HOH HOH . G 4 HOH A 44 744 78 HOH HOH . G 4 HOH A 45 745 84 HOH HOH . G 4 HOH A 46 746 62 HOH HOH . G 4 HOH A 47 747 67 HOH HOH . G 4 HOH A 48 748 51 HOH HOH . G 4 HOH A 49 749 91 HOH HOH . G 4 HOH A 50 750 77 HOH HOH . G 4 HOH A 51 751 38 HOH HOH . G 4 HOH A 52 752 80 HOH HOH . G 4 HOH A 53 753 37 HOH HOH . H 4 HOH B 1 701 56 HOH HOH . H 4 HOH B 2 702 5 HOH HOH . H 4 HOH B 3 703 61 HOH HOH . H 4 HOH B 4 704 92 HOH HOH . H 4 HOH B 5 705 75 HOH HOH . H 4 HOH B 6 706 3 HOH HOH . H 4 HOH B 7 707 6 HOH HOH . H 4 HOH B 8 708 57 HOH HOH . H 4 HOH B 9 709 59 HOH HOH . H 4 HOH B 10 710 86 HOH HOH . H 4 HOH B 11 711 87 HOH HOH . H 4 HOH B 12 712 64 HOH HOH . H 4 HOH B 13 713 55 HOH HOH . H 4 HOH B 14 714 90 HOH HOH . H 4 HOH B 15 715 7 HOH HOH . H 4 HOH B 16 716 82 HOH HOH . H 4 HOH B 17 717 18 HOH HOH . H 4 HOH B 18 718 39 HOH HOH . H 4 HOH B 19 719 15 HOH HOH . H 4 HOH B 20 720 14 HOH HOH . H 4 HOH B 21 721 16 HOH HOH . H 4 HOH B 22 722 22 HOH HOH . H 4 HOH B 23 723 20 HOH HOH . H 4 HOH B 24 724 2 HOH HOH . H 4 HOH B 25 725 11 HOH HOH . H 4 HOH B 26 726 41 HOH HOH . H 4 HOH B 27 727 45 HOH HOH . H 4 HOH B 28 728 42 HOH HOH . H 4 HOH B 29 729 35 HOH HOH . H 4 HOH B 30 730 10 HOH HOH . H 4 HOH B 31 731 46 HOH HOH . H 4 HOH B 32 732 88 HOH HOH . H 4 HOH B 33 733 65 HOH HOH . H 4 HOH B 34 734 63 HOH HOH . H 4 HOH B 35 735 93 HOH HOH . H 4 HOH B 36 736 50 HOH HOH . H 4 HOH B 37 737 54 HOH HOH . H 4 HOH B 38 738 12 HOH HOH . H 4 HOH B 39 739 58 HOH HOH . I 4 HOH C 1 701 44 HOH HOH . I 4 HOH C 2 702 95 HOH HOH . I 4 HOH C 3 703 89 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C 5CJ . . . E 3 -8.61 -3.22 19.266 1 32.76 ? C 5CJ 601 A 1 HETATM 2 O O 5CJ . . . E 3 -8.518 -3.788 16.745 1 34.35 ? O 5CJ 601 A 1 HETATM 3 C C01 5CJ . . . E 3 -4.174 -2.361 24.074 1 41.82 ? C01 5CJ 601 A 1 HETATM 4 C C02 5CJ . . . E 3 -2.838 -2.412 24.225 1 42.72 ? C02 5CJ 601 A 1 HETATM 5 C C03 5CJ . . . E 3 -4.73 -2.539 22.864 1 39.81 ? C03 5CJ 601 A 1 HETATM 6 C C04 5CJ . . . E 3 -4.586 -2.972 20.379 1 39.03 ? C04 5CJ 601 A 1 HETATM 7 C C05 5CJ . . . E 3 -5.578 -1.868 19.978 1 38.34 ? C05 5CJ 601 A 1 HETATM 8 C C06 5CJ . . . E 3 -5.573 -2.092 17.461 1 32.29 ? C06 5CJ 601 A 1 HETATM 9 C C07 5CJ . . . E 3 -7.176 -3.478 18.76 1 36.94 ? C07 5CJ 601 A 1 HETATM 10 F F01 5CJ . . . E 3 -0.768 -2.693 23.266 1 38.32 ? F01 5CJ 601 A 1 HETATM 11 C C08 5CJ . . . E 3 -6.221 -3.073 16.475 1 33.53 ? C08 5CJ 601 A 1 HETATM 12 C C09 5CJ . . . E 3 -2.087 -2.643 23.133 1 43.82 ? C09 5CJ 601 A 1 HETATM 13 C C10 5CJ . . . E 3 -2.653 -2.82 21.928 1 44.03 ? C10 5CJ 601 A 1 HETATM 14 O O01 5CJ . . . E 3 -2.245 -2.236 25.439 1 43.75 ? O01 5CJ 601 A 1 HETATM 15 C C11 5CJ . . . E 3 -6.577 -4.535 19.712 1 40.53 ? C11 5CJ 601 A 1 HETATM 16 C C12 5CJ . . . E 3 -3.989 -2.777 21.768 1 43.51 ? C12 5CJ 601 A 1 HETATM 17 F F02 5CJ . . . E 3 -1.868 -3.045 20.888 1 46.22 ? F02 5CJ 601 A 1 HETATM 18 C C13 5CJ . . . E 3 -6.446 -2.114 18.734 1 37.31 ? C13 5CJ 601 A 1 HETATM 19 C C14 5CJ . . . E 3 -5.102 -4.397 20.105 1 37.9 ? C14 5CJ 601 A 1 HETATM 20 C C15 5CJ . . . E 3 -7.221 -3.903 17.281 1 36.54 ? C15 5CJ 601 A 1 HETATM 21 F F 5CJ . . . E 3 -4.954 -2.134 25.124 1 40.49 ? F 5CJ 601 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 21 #