data_5DIS
#
_model_server_result.job_id            kYlXxNjqGTzX-jxp7qcclw 
_model_server_result.datetime_utc      '2025-02-05 18:05:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5dis 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":301}' 
#
_entry.id    5DIS 
#
_exptl.entry_id    5DIS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              115.13 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            PROLINE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5DIS 
_cell.length_a            112.33 
_cell.length_b            248.97 
_cell.length_c            210.57 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5DIS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 F N N 
? 6 I N N 
#
_pdbx_entity_branch.entity_id    5 
_pdbx_entity_branch.type         oligosaccharide 
#
_pdbx_entity_branch_link.link_id                     1 
_pdbx_entity_branch_link.details                     ? 
_pdbx_entity_branch_link.entity_id                   5 
_pdbx_entity_branch_link.entity_branch_list_num_1    2 
_pdbx_entity_branch_link.entity_branch_list_num_2    1 
_pdbx_entity_branch_link.comp_id_1                   GLC 
_pdbx_entity_branch_link.comp_id_2                   GLC 
_pdbx_entity_branch_link.atom_id_1                   C1 
_pdbx_entity_branch_link.leaving_atom_id_1           O1 
_pdbx_entity_branch_link.atom_stereo_config_1        . 
_pdbx_entity_branch_link.atom_id_2                   O4 
_pdbx_entity_branch_link.leaving_atom_id_2           HO4 
_pdbx_entity_branch_link.atom_stereo_config_2        . 
_pdbx_entity_branch_link.value_order                 sing 
#
loop_
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.hetero
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.auth_mon_id
5 n E GLC 1 E 1 GLC E 2 MAL 
5 n E GLC 2 E 2 GLC E 2 MAL 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 E O4 GLC . E GLC 1 1_555 E C1 GLC . E GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 sing 
metalc ? metalc1 B OG1 THR 17 B THR 24 1_555 H MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? 
metalc ? metalc2 B OG1 THR 35 B THR 42 1_555 H MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? 
metalc ? metalc3 G O1G GTP . B GTP 201 1_555 H MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
metalc ? metalc4 G O1B GTP . B GTP 201 1_555 H MG MG . B MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.953 ? 
metalc ? metalc5 H MG MG . B MG 202 1_555 K O HOH . B HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? 
metalc ? metalc6 H MG MG . B MG 202 1_555 K O HOH . B HOH 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? 
#
_chem_comp.formula           'C5 H9 N O2' 
_chem_comp.formula_weight    115.13 
_chem_comp.id                PRO 
_chem_comp.mon_nstd_flag     y 
_chem_comp.name              PROLINE 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA PRO sing 334 n n 
N CD PRO sing 335 n n 
N H PRO sing 336 n n 
CA C PRO sing 337 n n 
CA CB PRO sing 338 n n 
CA HA PRO sing 339 n n 
C O PRO doub 340 n n 
C OXT PRO sing 341 n n 
CB CG PRO sing 342 n n 
CB HB2 PRO sing 343 n n 
CB HB3 PRO sing 344 n n 
CG CD PRO sing 345 n n 
CG HG2 PRO sing 346 n n 
CG HG3 PRO sing 347 n n 
CD HD2 PRO sing 348 n n 
CD HD3 PRO sing 349 n n 
OXT HXT PRO sing 350 n n 
#
_atom_sites.entry_id                     5DIS 
_atom_sites.fract_transf_matrix[1][1]    0.008902 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.004017 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004749 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 6 PRO A 1 1101 1 PRO PRO . 
G 7 GTP B 1 201 217 GTP GTP . 
H 8 MG B 1 202 218 MG MG . 
I 6 PRO C 1 301 3 PRO PRO . 
J 9 HOH A 1 1201 8 HOH HOH . 
J 9 HOH A 2 1202 4 HOH HOH . 
J 9 HOH A 3 1203 13 HOH HOH . 
K 9 HOH B 1 301 1 HOH HOH . 
K 9 HOH B 2 302 11 HOH HOH . 
K 9 HOH B 3 303 12 HOH HOH . 
K 9 HOH B 4 304 5 HOH HOH . 
K 9 HOH B 5 305 3 HOH HOH . 
K 9 HOH B 6 306 2 HOH HOH . 
K 9 HOH B 7 307 6 HOH HOH . 
K 9 HOH B 8 308 7 HOH HOH . 
K 9 HOH B 9 309 9 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N PRO . . . I 6 -21.412 -33.02 -35.855 1 185.87 ? N PRO 301 C 1 
HETATM 2 C CA PRO . . . I 6 -20.175 -33.523 -36.461 1 210.11 ? CA PRO 301 C 1 
HETATM 3 C C PRO . . . I 6 -18.987 -33.375 -35.517 1 266.86 ? C PRO 301 C 1 
HETATM 4 O O PRO . . . I 6 -17.904 -33.959 -35.837 1 329.12 ? O PRO 301 C 1 
HETATM 5 C CB PRO . . . I 6 -19.991 -32.616 -37.681 1 188.13 ? CB PRO 301 C 1 
HETATM 6 C CG PRO . . . I 6 -21.368 -32.158 -38.019 1 167.84 ? CG PRO 301 C 1 
HETATM 7 C CD PRO . . . I 6 -22.081 -32.021 -36.706 1 166.88 ? CD PRO 301 C 1 
HETATM 8 O OXT PRO . . . I 6 -19.156 -32.676 -34.47 1 275.99 ? OXT PRO 301 C 1 
#
_model_server_stats.io_time_ms              34 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    34 
_model_server_stats.query_time_ms           298 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           8 
#