data_5DJP
#
_model_server_result.job_id            Bm0zQHlDiHi638HraK_A4w 
_model_server_result.datetime_utc      '2024-12-21 16:23:02' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5djp 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":401}' 
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_entry.id    5DJP 
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_exptl.entry_id    5DJP 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              287.312 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '4-(naphthalen-1-yl)-1H-indole-2-carboxylic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5DJP 
_cell.length_a            111.43 
_cell.length_b            111.43 
_cell.length_c            71.764 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 5DJP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
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_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
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_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
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loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z+1/2 0 -1 0 -1 0 0 0 0 -1 111.43 111.43 35.882 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C19 H13 N O2' 
_chem_comp.formula_weight    287.312 
_chem_comp.id                5BJ 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '4-(naphthalen-1-yl)-1H-indole-2-carboxylic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O18 C13 5BJ doub 1 n n 
C13 O17 5BJ sing 2 n n 
C13 C9 5BJ sing 3 n n 
C9 C4 5BJ doub 4 n y 
C9 N7 5BJ sing 5 n y 
C4 C1 5BJ sing 6 n y 
C16 C19 5BJ doub 7 n y 
C16 C11 5BJ sing 8 n y 
C19 C14 5BJ sing 9 n y 
N7 C3 5BJ sing 10 n y 
C11 C5 5BJ doub 11 n y 
C1 C3 5BJ doub 12 n y 
C1 C2 5BJ sing 13 n y 
C14 C20 5BJ doub 14 n y 
C14 C10 5BJ sing 15 n y 
C5 C10 5BJ sing 16 n y 
C5 C2 5BJ sing 17 n n 
C20 C22 5BJ sing 18 n y 
C3 C8 5BJ sing 19 n y 
C10 C15 5BJ doub 20 n y 
C2 C6 5BJ doub 21 n y 
C22 C21 5BJ doub 22 n y 
C15 C21 5BJ sing 23 n y 
C8 C12 5BJ doub 24 n y 
C6 C12 5BJ sing 25 n y 
C11 H1 5BJ sing 26 n n 
C12 H2 5BJ sing 27 n n 
C15 H3 5BJ sing 28 n n 
C16 H4 5BJ sing 29 n n 
C19 H5 5BJ sing 30 n n 
C20 H6 5BJ sing 31 n n 
C21 H7 5BJ sing 32 n n 
C22 H8 5BJ sing 33 n n 
C4 H9 5BJ sing 34 n n 
C6 H10 5BJ sing 35 n n 
N7 H11 5BJ sing 36 n n 
C8 H12 5BJ sing 37 n n 
O17 H13 5BJ sing 38 n n 
#
_atom_sites.entry_id                     5DJP 
_atom_sites.fract_transf_matrix[1][1]    0.008974 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008974 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013935 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 5BJ F 1 401 1 5BJ LI1 . 
C 3 PO4 F 1 402 1 PO4 PO4 . 
D 4 HOH F 1 501 5 HOH HOH . 
D 4 HOH F 2 502 7 HOH HOH . 
D 4 HOH F 3 503 1 HOH HOH . 
D 4 HOH F 4 504 14 HOH HOH . 
D 4 HOH F 5 505 45 HOH HOH . 
D 4 HOH F 6 506 29 HOH HOH . 
D 4 HOH F 7 507 43 HOH HOH . 
D 4 HOH F 8 508 24 HOH HOH . 
D 4 HOH F 9 509 38 HOH HOH . 
D 4 HOH F 10 510 55 HOH HOH . 
D 4 HOH F 11 511 2 HOH HOH . 
D 4 HOH F 12 512 4 HOH HOH . 
D 4 HOH F 13 513 39 HOH HOH . 
D 4 HOH F 14 514 12 HOH HOH . 
D 4 HOH F 15 515 37 HOH HOH . 
D 4 HOH F 16 516 20 HOH HOH . 
D 4 HOH F 17 517 33 HOH HOH . 
D 4 HOH F 18 518 36 HOH HOH . 
D 4 HOH F 19 519 22 HOH HOH . 
D 4 HOH F 20 520 18 HOH HOH . 
D 4 HOH F 21 521 11 HOH HOH . 
D 4 HOH F 22 522 42 HOH HOH . 
D 4 HOH F 23 523 27 HOH HOH . 
D 4 HOH F 24 524 54 HOH HOH . 
D 4 HOH F 25 525 10 HOH HOH . 
D 4 HOH F 26 526 53 HOH HOH . 
D 4 HOH F 27 527 50 HOH HOH . 
D 4 HOH F 28 528 32 HOH HOH . 
D 4 HOH F 29 529 28 HOH HOH . 
D 4 HOH F 30 530 16 HOH HOH . 
D 4 HOH F 31 531 51 HOH HOH . 
D 4 HOH F 32 532 35 HOH HOH . 
D 4 HOH F 33 533 40 HOH HOH . 
D 4 HOH F 34 534 48 HOH HOH . 
D 4 HOH F 35 535 25 HOH HOH . 
D 4 HOH F 36 536 46 HOH HOH . 
D 4 HOH F 37 537 52 HOH HOH . 
D 4 HOH F 38 538 26 HOH HOH . 
D 4 HOH F 39 539 17 HOH HOH . 
D 4 HOH F 40 540 6 HOH HOH . 
D 4 HOH F 41 541 9 HOH HOH . 
D 4 HOH F 42 542 34 HOH HOH . 
D 4 HOH F 43 543 3 HOH HOH . 
D 4 HOH F 44 544 41 HOH HOH . 
D 4 HOH F 45 545 15 HOH HOH . 
D 4 HOH F 46 546 21 HOH HOH . 
D 4 HOH F 47 547 19 HOH HOH . 
D 4 HOH F 48 548 8 HOH HOH . 
D 4 HOH F 49 549 13 HOH HOH . 
D 4 HOH F 50 550 44 HOH HOH . 
D 4 HOH F 51 551 31 HOH HOH . 
D 4 HOH F 52 552 49 HOH HOH . 
D 4 HOH F 53 553 23 HOH HOH . 
D 4 HOH F 54 554 30 HOH HOH . 
D 4 HOH F 55 555 47 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 5BJ . . . B 2 3.862 73.856 25.483 1 86.1 ? C1 5BJ 401 F 1 
HETATM 2 C C2 5BJ . . . B 2 2.643 74.277 26.053 1 84.12 ? C2 5BJ 401 F 1 
HETATM 3 C C3 5BJ . . . B 2 4.443 72.631 25.804 1 86.52 ? C3 5BJ 401 F 1 
HETATM 4 C C11 5BJ . . . B 2 0.733 75.586 25.215 1 79 ? C11 5BJ 401 F 1 
HETATM 5 C C12 5BJ . . . B 2 2.591 72.107 27.241 1 84.69 ? C12 5BJ 401 F 1 
HETATM 6 C C13 5BJ . . . B 2 7.091 73.742 23.63 1 93 ? C13 5BJ 401 F 1 
HETATM 7 C C14 5BJ . . . B 2 2.003 78.066 25.598 1 78.06 ? C14 5BJ 401 F 1 
HETATM 8 C C15 5BJ . . . B 2 4.012 76.993 26.459 1 72.67 ? C15 5BJ 401 F 1 
HETATM 9 C C16 5BJ . . . B 2 0.052 76.766 24.887 1 78.83 ? C16 5BJ 401 F 1 
HETATM 10 C C19 5BJ . . . B 2 0.695 78.001 25.066 1 79.38 ? C19 5BJ 401 F 1 
HETATM 11 C C20 5BJ . . . B 2 2.615 79.328 25.784 1 74.66 ? C20 5BJ 401 F 1 
HETATM 12 C C21 5BJ . . . B 2 4.622 78.241 26.623 1 71.72 ? C21 5BJ 401 F 1 
HETATM 13 C C22 5BJ . . . B 2 3.91 79.413 26.319 1 72.6 ? C22 5BJ 401 F 1 
HETATM 14 C C4 5BJ . . . B 2 4.865 74.475 24.538 1 87.71 ? C4 5BJ 401 F 1 
HETATM 15 C C5 5BJ . . . B 2 2.045 75.612 25.729 1 80.45 ? C5 5BJ 401 F 1 
HETATM 16 C C6 5BJ . . . B 2 2.015 73.364 26.937 1 84.82 ? C6 5BJ 401 F 1 
HETATM 17 N N7 5BJ . . . B 2 5.609 72.516 25.142 1 88.84 ? N7 5BJ 401 F 1 
HETATM 18 C C8 5BJ . . . B 2 3.828 71.723 26.681 1 84.52 ? C8 5BJ 401 F 1 
HETATM 19 C C9 5BJ . . . B 2 5.853 73.573 24.407 1 90.41 ? C9 5BJ 401 F 1 
HETATM 20 C C10 5BJ . . . B 2 2.699 76.868 25.939 1 77.19 ? C10 5BJ 401 F 1 
HETATM 21 O O17 5BJ . . . B 2 7.848 74.823 23.85 1 94.49 ? O17 5BJ 401 F 1 
HETATM 22 O O18 5BJ . . . B 2 7.426 72.882 22.836 1 93.67 ? O18 5BJ 401 F 1 
#
_model_server_stats.io_time_ms              71 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    20 
_model_server_stats.query_time_ms           265 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           22 
#