data_5DJT # _model_server_result.job_id b0KWLaX2jM-a_iKbJPauIg _model_server_result.datetime_utc '2024-11-24 23:10:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5djt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 5DJT # _exptl.entry_id 5DJT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 63.546 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COPPER (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5DJT _cell.length_a 110.14 _cell.length_b 110.14 _cell.length_c 37.51 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5DJT _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id NE2 _struct_conn.ptnr1_label_comp_id HIS _struct_conn.ptnr1_label_seq_id 118 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id HIS _struct_conn.ptnr1_auth_seq_id 519 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_atom_id CU _struct_conn.ptnr2_label_comp_id CU _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CU _struct_conn.ptnr2_auth_seq_id 601 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.966 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'Cu 2' _chem_comp.formula_weight 63.546 _chem_comp.id CU _chem_comp.mon_nstd_flag . _chem_comp.name 'COPPER (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5DJT _atom_sites.fract_transf_matrix[1][1] 0.009079 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009079 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02666 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CU A 1 601 1 CU CU . D 4 FMN A 1 602 1 FMN FMN . E 5 CL A 1 603 1 CL CL . F 6 HOH A 1 701 293 HOH HOH . F 6 HOH A 2 702 264 HOH HOH . F 6 HOH A 3 703 240 HOH HOH . F 6 HOH A 4 704 282 HOH HOH . F 6 HOH A 5 705 21 HOH HOH . F 6 HOH A 6 706 182 HOH HOH . F 6 HOH A 7 707 299 HOH HOH . F 6 HOH A 8 708 147 HOH HOH . F 6 HOH A 9 709 268 HOH HOH . F 6 HOH A 10 710 178 HOH HOH . F 6 HOH A 11 711 135 HOH HOH . F 6 HOH A 12 712 171 HOH HOH . F 6 HOH A 13 713 126 HOH HOH . F 6 HOH A 14 714 66 HOH HOH . F 6 HOH A 15 715 224 HOH HOH . F 6 HOH A 16 716 263 HOH HOH . F 6 HOH A 17 717 140 HOH HOH . F 6 HOH A 18 718 247 HOH HOH . F 6 HOH A 19 719 165 HOH HOH . F 6 HOH A 20 720 28 HOH HOH . F 6 HOH A 21 721 90 HOH HOH . F 6 HOH A 22 722 73 HOH HOH . F 6 HOH A 23 723 234 HOH HOH . F 6 HOH A 24 724 248 HOH HOH . F 6 HOH A 25 725 129 HOH HOH . F 6 HOH A 26 726 271 HOH HOH . F 6 HOH A 27 727 43 HOH HOH . F 6 HOH A 28 728 82 HOH HOH . F 6 HOH A 29 729 108 HOH HOH . F 6 HOH A 30 730 225 HOH HOH . F 6 HOH A 31 731 149 HOH HOH . F 6 HOH A 32 732 106 HOH HOH . F 6 HOH A 33 733 16 HOH HOH . F 6 HOH A 34 734 157 HOH HOH . F 6 HOH A 35 735 133 HOH HOH . F 6 HOH A 36 736 33 HOH HOH . F 6 HOH A 37 737 31 HOH HOH . F 6 HOH A 38 738 55 HOH HOH . F 6 HOH A 39 739 6 HOH HOH . F 6 HOH A 40 740 139 HOH HOH . F 6 HOH A 41 741 119 HOH HOH . F 6 HOH A 42 742 144 HOH HOH . F 6 HOH A 43 743 34 HOH HOH . F 6 HOH A 44 744 12 HOH HOH . F 6 HOH A 45 745 13 HOH HOH . F 6 HOH A 46 746 190 HOH HOH . F 6 HOH A 47 747 89 HOH HOH . F 6 HOH A 48 748 30 HOH HOH . F 6 HOH A 49 749 99 HOH HOH . F 6 HOH A 50 750 7 HOH HOH . F 6 HOH A 51 751 216 HOH HOH . F 6 HOH A 52 752 38 HOH HOH . F 6 HOH A 53 753 187 HOH HOH . F 6 HOH A 54 754 2 HOH HOH . F 6 HOH A 55 755 1 HOH HOH . F 6 HOH A 56 756 25 HOH HOH . F 6 HOH A 57 757 18 HOH HOH . F 6 HOH A 58 758 83 HOH HOH . F 6 HOH A 59 759 252 HOH HOH . F 6 HOH A 60 760 78 HOH HOH . F 6 HOH A 61 761 213 HOH HOH . F 6 HOH A 62 762 68 HOH HOH . F 6 HOH A 63 763 5 HOH HOH . F 6 HOH A 64 764 103 HOH HOH . F 6 HOH A 65 765 76 HOH HOH . F 6 HOH A 66 766 277 HOH HOH . F 6 HOH A 67 767 274 HOH HOH . F 6 HOH A 68 768 272 HOH HOH . F 6 HOH A 69 769 17 HOH HOH . F 6 HOH A 70 770 71 HOH HOH . F 6 HOH A 71 771 19 HOH HOH . F 6 HOH A 72 772 113 HOH HOH . F 6 HOH A 73 773 32 HOH HOH . F 6 HOH A 74 774 27 HOH HOH . F 6 HOH A 75 775 169 HOH HOH . F 6 HOH A 76 776 295 HOH HOH . F 6 HOH A 77 777 96 HOH HOH . F 6 HOH A 78 778 59 HOH HOH . F 6 HOH A 79 779 110 HOH HOH . F 6 HOH A 80 780 51 HOH HOH . F 6 HOH A 81 781 122 HOH HOH . F 6 HOH A 82 782 10 HOH HOH . F 6 HOH A 83 783 142 HOH HOH . F 6 HOH A 84 784 15 HOH HOH . F 6 HOH A 85 785 160 HOH HOH . F 6 HOH A 86 786 63 HOH HOH . F 6 HOH A 87 787 85 HOH HOH . F 6 HOH A 88 788 67 HOH HOH . F 6 HOH A 89 789 20 HOH HOH . F 6 HOH A 90 790 57 HOH HOH . F 6 HOH A 91 791 79 HOH HOH . F 6 HOH A 92 792 209 HOH HOH . F 6 HOH A 93 793 92 HOH HOH . F 6 HOH A 94 794 9 HOH HOH . F 6 HOH A 95 795 107 HOH HOH . F 6 HOH A 96 796 46 HOH HOH . F 6 HOH A 97 797 202 HOH HOH . F 6 HOH A 98 798 54 HOH HOH . F 6 HOH A 99 799 259 HOH HOH . F 6 HOH A 100 800 279 HOH HOH . F 6 HOH A 101 801 40 HOH HOH . F 6 HOH A 102 802 210 HOH HOH . F 6 HOH A 103 803 11 HOH HOH . F 6 HOH A 104 804 8 HOH HOH . F 6 HOH A 105 805 45 HOH HOH . F 6 HOH A 106 806 125 HOH HOH . F 6 HOH A 107 807 22 HOH HOH . F 6 HOH A 108 808 241 HOH HOH . F 6 HOH A 109 809 42 HOH HOH . F 6 HOH A 110 810 62 HOH HOH . F 6 HOH A 111 811 88 HOH HOH . F 6 HOH A 112 812 91 HOH HOH . F 6 HOH A 113 813 275 HOH HOH . F 6 HOH A 114 814 26 HOH HOH . F 6 HOH A 115 815 58 HOH HOH . F 6 HOH A 116 816 72 HOH HOH . F 6 HOH A 117 817 308 HOH HOH . F 6 HOH A 118 818 123 HOH HOH . F 6 HOH A 119 819 284 HOH HOH . F 6 HOH A 120 820 61 HOH HOH . F 6 HOH A 121 821 35 HOH HOH . F 6 HOH A 122 822 211 HOH HOH . F 6 HOH A 123 823 242 HOH HOH . F 6 HOH A 124 824 161 HOH HOH . F 6 HOH A 125 825 243 HOH HOH . F 6 HOH A 126 826 124 HOH HOH . F 6 HOH A 127 827 172 HOH HOH . F 6 HOH A 128 828 251 HOH HOH . F 6 HOH A 129 829 218 HOH HOH . F 6 HOH A 130 830 175 HOH HOH . F 6 HOH A 131 831 290 HOH HOH . F 6 HOH A 132 832 267 HOH HOH . F 6 HOH A 133 833 167 HOH HOH . F 6 HOH A 134 834 227 HOH HOH . F 6 HOH A 135 835 98 HOH HOH . F 6 HOH A 136 836 191 HOH HOH . F 6 HOH A 137 837 176 HOH HOH . F 6 HOH A 138 838 291 HOH HOH . F 6 HOH A 139 839 261 HOH HOH . F 6 HOH A 140 840 198 HOH HOH . F 6 HOH A 141 841 244 HOH HOH . F 6 HOH A 142 842 238 HOH HOH . F 6 HOH A 143 843 232 HOH HOH . F 6 HOH A 144 844 81 HOH HOH . F 6 HOH A 145 845 64 HOH HOH . F 6 HOH A 146 846 315 HOH HOH . F 6 HOH A 147 847 276 HOH HOH . F 6 HOH A 148 848 181 HOH HOH . F 6 HOH A 149 849 168 HOH HOH . F 6 HOH A 150 850 183 HOH HOH . F 6 HOH A 151 851 155 HOH HOH . F 6 HOH A 152 852 120 HOH HOH . F 6 HOH A 153 853 65 HOH HOH . F 6 HOH A 154 854 112 HOH HOH . F 6 HOH A 155 855 174 HOH HOH . F 6 HOH A 156 856 114 HOH HOH . F 6 HOH A 157 857 255 HOH HOH . F 6 HOH A 158 858 146 HOH HOH . F 6 HOH A 159 859 153 HOH HOH . F 6 HOH A 160 860 44 HOH HOH . F 6 HOH A 161 861 121 HOH HOH . F 6 HOH A 162 862 258 HOH HOH . F 6 HOH A 163 863 226 HOH HOH . F 6 HOH A 164 864 128 HOH HOH . F 6 HOH A 165 865 80 HOH HOH . F 6 HOH A 166 866 101 HOH HOH . F 6 HOH A 167 867 48 HOH HOH . F 6 HOH A 168 868 49 HOH HOH . F 6 HOH A 169 869 309 HOH HOH . F 6 HOH A 170 870 260 HOH HOH . F 6 HOH A 171 871 159 HOH HOH . F 6 HOH A 172 872 302 HOH HOH . F 6 HOH A 173 873 163 HOH HOH . F 6 HOH A 174 874 217 HOH HOH . F 6 HOH A 175 875 219 HOH HOH . F 6 HOH A 176 876 193 HOH HOH . F 6 HOH A 177 877 316 HOH HOH . F 6 HOH A 178 878 285 HOH HOH . F 6 HOH A 179 879 154 HOH HOH . F 6 HOH A 180 880 148 HOH HOH . F 6 HOH A 181 881 300 HOH HOH . F 6 HOH A 182 882 170 HOH HOH . F 6 HOH A 183 883 102 HOH HOH . F 6 HOH A 184 884 200 HOH HOH . F 6 HOH A 185 885 233 HOH HOH . F 6 HOH A 186 886 297 HOH HOH . G 6 HOH B 1 101 204 HOH HOH . G 6 HOH B 2 102 37 HOH HOH . G 6 HOH B 3 103 116 HOH HOH . G 6 HOH B 4 104 265 HOH HOH . G 6 HOH B 5 105 292 HOH HOH . G 6 HOH B 6 106 14 HOH HOH . G 6 HOH B 7 107 207 HOH HOH . G 6 HOH B 8 108 109 HOH HOH . G 6 HOH B 9 109 97 HOH HOH . G 6 HOH B 10 110 24 HOH HOH . G 6 HOH B 11 111 192 HOH HOH . G 6 HOH B 12 112 318 HOH HOH . G 6 HOH B 13 113 254 HOH HOH . G 6 HOH B 14 114 36 HOH HOH . G 6 HOH B 15 115 118 HOH HOH . G 6 HOH B 16 116 117 HOH HOH . G 6 HOH B 17 117 50 HOH HOH . G 6 HOH B 18 118 214 HOH HOH . G 6 HOH B 19 119 104 HOH HOH . G 6 HOH B 20 120 3 HOH HOH . G 6 HOH B 21 121 196 HOH HOH . G 6 HOH B 22 122 111 HOH HOH . G 6 HOH B 23 123 39 HOH HOH . G 6 HOH B 24 124 29 HOH HOH . G 6 HOH B 25 125 115 HOH HOH . G 6 HOH B 26 126 131 HOH HOH . G 6 HOH B 27 127 69 HOH HOH . G 6 HOH B 28 128 132 HOH HOH . G 6 HOH B 29 129 60 HOH HOH . G 6 HOH B 30 130 127 HOH HOH . G 6 HOH B 31 131 70 HOH HOH . G 6 HOH B 32 132 164 HOH HOH . G 6 HOH B 33 133 47 HOH HOH . G 6 HOH B 34 134 195 HOH HOH . G 6 HOH B 35 135 84 HOH HOH . G 6 HOH B 36 136 158 HOH HOH . G 6 HOH B 37 137 188 HOH HOH . G 6 HOH B 38 138 266 HOH HOH . G 6 HOH B 39 139 205 HOH HOH . G 6 HOH B 40 140 52 HOH HOH . G 6 HOH B 41 141 53 HOH HOH . G 6 HOH B 42 142 208 HOH HOH . G 6 HOH B 43 143 4 HOH HOH . G 6 HOH B 44 144 95 HOH HOH . G 6 HOH B 45 145 100 HOH HOH . G 6 HOH B 46 146 150 HOH HOH . G 6 HOH B 47 147 314 HOH HOH . G 6 HOH B 48 148 287 HOH HOH . G 6 HOH B 49 149 74 HOH HOH . G 6 HOH B 50 150 256 HOH HOH . G 6 HOH B 51 151 23 HOH HOH . G 6 HOH B 52 152 189 HOH HOH . G 6 HOH B 53 153 156 HOH HOH . G 6 HOH B 54 154 237 HOH HOH . G 6 HOH B 55 155 77 HOH HOH . G 6 HOH B 56 156 186 HOH HOH . G 6 HOH B 57 157 177 HOH HOH . G 6 HOH B 58 158 311 HOH HOH . G 6 HOH B 59 159 289 HOH HOH . G 6 HOH B 60 160 229 HOH HOH . G 6 HOH B 61 161 87 HOH HOH . G 6 HOH B 62 162 105 HOH HOH . G 6 HOH B 63 163 317 HOH HOH . G 6 HOH B 64 164 184 HOH HOH . G 6 HOH B 65 165 93 HOH HOH . G 6 HOH B 66 166 56 HOH HOH . G 6 HOH B 67 167 203 HOH HOH . G 6 HOH B 68 168 134 HOH HOH . G 6 HOH B 69 169 75 HOH HOH . G 6 HOH B 70 170 288 HOH HOH . G 6 HOH B 71 171 304 HOH HOH . G 6 HOH B 72 172 273 HOH HOH . G 6 HOH B 73 173 137 HOH HOH . G 6 HOH B 74 174 86 HOH HOH . G 6 HOH B 75 175 136 HOH HOH . G 6 HOH B 76 176 310 HOH HOH . G 6 HOH B 77 177 162 HOH HOH . G 6 HOH B 78 178 173 HOH HOH . G 6 HOH B 79 179 215 HOH HOH . G 6 HOH B 80 180 141 HOH HOH . G 6 HOH B 81 181 197 HOH HOH . G 6 HOH B 82 182 41 HOH HOH . G 6 HOH B 83 183 138 HOH HOH . G 6 HOH B 84 184 269 HOH HOH . G 6 HOH B 85 185 221 HOH HOH . G 6 HOH B 86 186 166 HOH HOH . G 6 HOH B 87 187 145 HOH HOH . G 6 HOH B 88 188 206 HOH HOH . G 6 HOH B 89 189 143 HOH HOH . G 6 HOH B 90 190 249 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CU _atom_site.label_atom_id CU _atom_site.label_comp_id CU _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -43.099 _atom_site.Cartn_y -25.764 _atom_site.Cartn_z 4.122 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 61.36 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CU _atom_site.auth_comp_id CU _atom_site.auth_seq_id 601 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 681 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #