data_5DL4 # _model_server_result.job_id PQdpajXCnblzS40lABDEew _model_server_result.datetime_utc '2024-11-25 13:40:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5dl4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":601}' # _entry.id 5DL4 # _exptl.entry_id 5DL4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 393.477 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "4,4'-{2-[3-(phenylamino)phenyl]prop-1-ene-1,1-diyl}diphenol" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.88 _cell.angle_gamma 90 _cell.entry_id 5DL4 _cell.length_a 56.41 _cell.length_b 82.046 _cell.length_c 58.377 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5DL4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C27 H23 N O2' _chem_comp.formula_weight 393.477 _chem_comp.id 5C4 _chem_comp.mon_nstd_flag . _chem_comp.name "4,4'-{2-[3-(phenylamino)phenyl]prop-1-ene-1,1-diyl}diphenol" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O01 C02 5C4 sing 1 n n C03 C02 5C4 doub 2 n y C03 C04 5C4 sing 3 n y C02 C30 5C4 sing 4 n y C04 C05 5C4 doub 5 n y C30 C29 5C4 doub 6 n y C05 C29 5C4 sing 7 n y C05 C06 5C4 sing 8 n n C06 C07 5C4 sing 9 n n C06 C14 5C4 doub 10 n n C07 C13 5C4 doub 11 n y C07 C08 5C4 sing 12 n y C13 C12 5C4 sing 13 n y C08 C09 5C4 doub 14 n y C12 C10 5C4 doub 15 n y C09 C10 5C4 sing 16 n y C10 O11 5C4 sing 17 n n C28 C14 5C4 sing 18 n n C14 C15 5C4 sing 19 n n C15 C27 5C4 doub 20 n y C15 C16 5C4 sing 21 n y C27 C19 5C4 sing 22 n y C16 C17 5C4 doub 23 n y C19 N20 5C4 sing 24 n n C19 C18 5C4 doub 25 n y C17 C18 5C4 sing 26 n y N20 C21 5C4 sing 27 n n C26 C21 5C4 doub 28 n y C26 C25 5C4 sing 29 n y C21 C22 5C4 sing 30 n y C25 C24 5C4 doub 31 n y C22 C23 5C4 doub 32 n y C24 C23 5C4 sing 33 n y O01 H1 5C4 sing 34 n n C03 H2 5C4 sing 35 n n C04 H3 5C4 sing 36 n n C08 H5 5C4 sing 37 n n C09 H6 5C4 sing 38 n n O11 H7 5C4 sing 39 n n C12 H8 5C4 sing 40 n n C13 H9 5C4 sing 41 n n C16 H11 5C4 sing 42 n n C17 H12 5C4 sing 43 n n C18 H13 5C4 sing 44 n n N20 H14 5C4 sing 45 n n C22 H15 5C4 sing 46 n n C23 H16 5C4 sing 47 n n C24 H17 5C4 sing 48 n n C25 H18 5C4 sing 49 n n C26 H19 5C4 sing 50 n n C27 H20 5C4 sing 51 n n C28 H21 5C4 sing 52 n n C28 H22 5C4 sing 53 n n C28 H23 5C4 sing 54 n n C29 H24 5C4 sing 55 n n C30 H25 5C4 sing 56 n n # _atom_sites.entry_id 5DL4 _atom_sites.fract_transf_matrix[1][1] 0.017727 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006762 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012188 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018334 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 5C4 A 1 601 1 5C4 UNK . F 3 5C4 B 1 601 2 5C4 UNK . G 4 HOH A 1 701 129 HOH HOH . G 4 HOH A 2 702 112 HOH HOH . G 4 HOH A 3 703 38 HOH HOH . G 4 HOH A 4 704 136 HOH HOH . G 4 HOH A 5 705 32 HOH HOH . G 4 HOH A 6 706 127 HOH HOH . G 4 HOH A 7 707 3 HOH HOH . G 4 HOH A 8 708 63 HOH HOH . G 4 HOH A 9 709 26 HOH HOH . G 4 HOH A 10 710 65 HOH HOH . G 4 HOH A 11 711 29 HOH HOH . G 4 HOH A 12 712 92 HOH HOH . G 4 HOH A 13 713 91 HOH HOH . G 4 HOH A 14 714 42 HOH HOH . G 4 HOH A 15 715 40 HOH HOH . G 4 HOH A 16 716 24 HOH HOH . G 4 HOH A 17 717 14 HOH HOH . G 4 HOH A 18 718 37 HOH HOH . G 4 HOH A 19 719 22 HOH HOH . G 4 HOH A 20 720 103 HOH HOH . G 4 HOH A 21 721 10 HOH HOH . G 4 HOH A 22 722 7 HOH HOH . G 4 HOH A 23 723 140 HOH HOH . G 4 HOH A 24 724 104 HOH HOH . G 4 HOH A 25 725 117 HOH HOH . G 4 HOH A 26 726 44 HOH HOH . G 4 HOH A 27 727 43 HOH HOH . G 4 HOH A 28 728 97 HOH HOH . G 4 HOH A 29 729 12 HOH HOH . G 4 HOH A 30 730 1 HOH HOH . G 4 HOH A 31 731 48 HOH HOH . G 4 HOH A 32 732 57 HOH HOH . G 4 HOH A 33 733 45 HOH HOH . G 4 HOH A 34 734 85 HOH HOH . G 4 HOH A 35 735 113 HOH HOH . G 4 HOH A 36 736 83 HOH HOH . G 4 HOH A 37 737 60 HOH HOH . G 4 HOH A 38 738 49 HOH HOH . G 4 HOH A 39 739 27 HOH HOH . G 4 HOH A 40 740 59 HOH HOH . G 4 HOH A 41 741 73 HOH HOH . G 4 HOH A 42 742 23 HOH HOH . G 4 HOH A 43 743 131 HOH HOH . G 4 HOH A 44 744 30 HOH HOH . G 4 HOH A 45 745 139 HOH HOH . G 4 HOH A 46 746 86 HOH HOH . G 4 HOH A 47 747 66 HOH HOH . G 4 HOH A 48 748 9 HOH HOH . G 4 HOH A 49 749 64 HOH HOH . G 4 HOH A 50 750 138 HOH HOH . G 4 HOH A 51 751 106 HOH HOH . G 4 HOH A 52 752 90 HOH HOH . G 4 HOH A 53 753 75 HOH HOH . G 4 HOH A 54 754 120 HOH HOH . G 4 HOH A 55 755 74 HOH HOH . G 4 HOH A 56 756 34 HOH HOH . G 4 HOH A 57 757 56 HOH HOH . G 4 HOH A 58 758 115 HOH HOH . G 4 HOH A 59 759 50 HOH HOH . G 4 HOH A 60 760 20 HOH HOH . G 4 HOH A 61 761 111 HOH HOH . G 4 HOH A 62 762 118 HOH HOH . G 4 HOH A 63 763 70 HOH HOH . G 4 HOH A 64 764 125 HOH HOH . G 4 HOH A 65 765 126 HOH HOH . G 4 HOH A 66 766 55 HOH HOH . G 4 HOH A 67 767 122 HOH HOH . G 4 HOH A 68 768 134 HOH HOH . G 4 HOH A 69 769 101 HOH HOH . G 4 HOH A 70 770 109 HOH HOH . G 4 HOH A 71 771 51 HOH HOH . G 4 HOH A 72 772 99 HOH HOH . H 4 HOH B 1 701 52 HOH HOH . H 4 HOH B 2 702 100 HOH HOH . H 4 HOH B 3 703 107 HOH HOH . H 4 HOH B 4 704 4 HOH HOH . H 4 HOH B 5 705 116 HOH HOH . H 4 HOH B 6 706 46 HOH HOH . H 4 HOH B 7 707 41 HOH HOH . H 4 HOH B 8 708 68 HOH HOH . H 4 HOH B 9 709 19 HOH HOH . H 4 HOH B 10 710 25 HOH HOH . H 4 HOH B 11 711 124 HOH HOH . H 4 HOH B 12 712 33 HOH HOH . H 4 HOH B 13 713 96 HOH HOH . H 4 HOH B 14 714 53 HOH HOH . H 4 HOH B 15 715 61 HOH HOH . H 4 HOH B 16 716 102 HOH HOH . H 4 HOH B 17 717 11 HOH HOH . H 4 HOH B 18 718 87 HOH HOH . H 4 HOH B 19 719 18 HOH HOH . H 4 HOH B 20 720 72 HOH HOH . H 4 HOH B 21 721 88 HOH HOH . H 4 HOH B 22 722 31 HOH HOH . H 4 HOH B 23 723 54 HOH HOH . H 4 HOH B 24 724 28 HOH HOH . H 4 HOH B 25 725 35 HOH HOH . H 4 HOH B 26 726 16 HOH HOH . H 4 HOH B 27 727 5 HOH HOH . H 4 HOH B 28 728 71 HOH HOH . H 4 HOH B 29 729 6 HOH HOH . H 4 HOH B 30 730 82 HOH HOH . H 4 HOH B 31 731 69 HOH HOH . H 4 HOH B 32 732 67 HOH HOH . H 4 HOH B 33 733 62 HOH HOH . H 4 HOH B 34 734 84 HOH HOH . H 4 HOH B 35 735 76 HOH HOH . H 4 HOH B 36 736 77 HOH HOH . H 4 HOH B 37 737 108 HOH HOH . H 4 HOH B 38 738 47 HOH HOH . H 4 HOH B 39 739 36 HOH HOH . H 4 HOH B 40 740 133 HOH HOH . H 4 HOH B 41 741 114 HOH HOH . H 4 HOH B 42 742 123 HOH HOH . H 4 HOH B 43 743 8 HOH HOH . H 4 HOH B 44 744 21 HOH HOH . H 4 HOH B 45 745 13 HOH HOH . H 4 HOH B 46 746 130 HOH HOH . H 4 HOH B 47 747 80 HOH HOH . H 4 HOH B 48 748 17 HOH HOH . H 4 HOH B 49 749 128 HOH HOH . H 4 HOH B 50 750 58 HOH HOH . H 4 HOH B 51 751 94 HOH HOH . H 4 HOH B 52 752 2 HOH HOH . H 4 HOH B 53 753 110 HOH HOH . H 4 HOH B 54 754 98 HOH HOH . H 4 HOH B 55 755 81 HOH HOH . H 4 HOH B 56 756 119 HOH HOH . H 4 HOH B 57 757 135 HOH HOH . H 4 HOH B 58 758 39 HOH HOH . H 4 HOH B 59 759 132 HOH HOH . H 4 HOH B 60 760 137 HOH HOH . H 4 HOH B 61 761 78 HOH HOH . H 4 HOH B 62 762 79 HOH HOH . H 4 HOH B 63 763 105 HOH HOH . H 4 HOH B 64 764 95 HOH HOH . H 4 HOH B 65 765 121 HOH HOH . H 4 HOH B 66 766 15 HOH HOH . I 4 HOH C 1 701 89 HOH HOH . I 4 HOH C 2 702 93 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O01 5C4 . . . F 3 6.31 6.789 34.467 1 35.84 ? O01 5C4 601 B 1 HETATM 2 C C02 5C4 . . . F 3 7.605 6.516 33.992 1 33.75 ? C02 5C4 601 B 1 HETATM 3 C C03 5C4 . . . F 3 8.552 5.98 34.847 1 34.88 ? C03 5C4 601 B 1 HETATM 4 C C04 5C4 . . . F 3 9.828 5.709 34.381 1 31.51 ? C04 5C4 601 B 1 HETATM 5 C C05 5C4 . . . F 3 10.166 5.978 33.063 1 32.64 ? C05 5C4 601 B 1 HETATM 6 C C06 5C4 . . . F 3 11.576 5.655 32.602 1 32.44 ? C06 5C4 601 B 1 HETATM 7 C C07 5C4 . . . F 3 12.218 4.429 33.203 1 35.61 ? C07 5C4 601 B 1 HETATM 8 C C08 5C4 . . . F 3 13.426 4.521 33.875 1 34.2 ? C08 5C4 601 B 1 HETATM 9 C C09 5C4 . . . F 3 13.996 3.384 34.422 1 29.62 ? C09 5C4 601 B 1 HETATM 10 C C10 5C4 . . . F 3 13.354 2.161 34.303 1 33.17 ? C10 5C4 601 B 1 HETATM 11 O O11 5C4 . . . F 3 13.929 1.005 34.858 1 36.66 ? O11 5C4 601 B 1 HETATM 12 C C12 5C4 . . . F 3 12.144 2.071 33.636 1 37.09 ? C12 5C4 601 B 1 HETATM 13 C C13 5C4 . . . F 3 11.576 3.206 33.088 1 36.94 ? C13 5C4 601 B 1 HETATM 14 C C14 5C4 . . . F 3 12.259 6.418 31.71 1 31.64 ? C14 5C4 601 B 1 HETATM 15 C C15 5C4 . . . F 3 13.486 5.858 31.016 1 35.72 ? C15 5C4 601 B 1 HETATM 16 C C16 5C4 . . . F 3 13.423 4.623 30.389 1 34.47 ? C16 5C4 601 B 1 HETATM 17 C C17 5C4 . . . F 3 14.543 4.107 29.752 1 38.9 ? C17 5C4 601 B 1 HETATM 18 C C18 5C4 . . . F 3 15.726 4.828 29.738 1 40.27 ? C18 5C4 601 B 1 HETATM 19 C C19 5C4 . . . F 3 15.795 6.062 30.364 1 41.13 ? C19 5C4 601 B 1 HETATM 20 N N20 5C4 . . . F 3 17.008 6.807 30.349 1 45.6 ? N20 5C4 601 B 1 HETATM 21 C C21 5C4 . . . F 3 18.262 6.207 30.66 1 50.32 ? C21 5C4 601 B 1 HETATM 22 C C22 5C4 . . . F 3 19.437 6.814 30.238 1 54.74 ? C22 5C4 601 B 1 HETATM 23 C C23 5C4 . . . F 3 20.663 6.241 30.538 1 54.15 ? C23 5C4 601 B 1 HETATM 24 C C24 5C4 . . . F 3 20.718 5.06 31.262 1 52.44 ? C24 5C4 601 B 1 HETATM 25 C C25 5C4 . . . F 3 19.545 4.452 31.686 1 52.47 ? C25 5C4 601 B 1 HETATM 26 C C26 5C4 . . . F 3 18.32 5.027 31.386 1 51.89 ? C26 5C4 601 B 1 HETATM 27 C C27 5C4 . . . F 3 14.672 6.578 31.001 1 36.48 ? C27 5C4 601 B 1 HETATM 28 C C28 5C4 . . . F 3 11.881 7.862 31.467 1 32.17 ? C28 5C4 601 B 1 HETATM 29 C C29 5C4 . . . F 3 9.214 6.508 32.205 1 31.09 ? C29 5C4 601 B 1 HETATM 30 C C30 5C4 . . . F 3 7.936 6.781 32.672 1 34.23 ? C30 5C4 601 B 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 30 #