data_5DLB
#
_model_server_result.job_id            A2fTgq7FHbNqzXWLGglpqQ 
_model_server_result.datetime_utc      '2024-11-05 00:16:27' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5dlb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":308}' 
#
_entry.id    5DLB 
#
_exptl.entry_id    5DLB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              58.082 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'THIOCYANATE ION' 
_entity.pdbx_number_of_molecules    32 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          92.24 
_cell.angle_gamma         90 
_cell.entry_id            5DLB 
_cell.length_a            112.206 
_cell.length_b            46.019 
_cell.length_c            58.006 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5DLB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 H N N 
? 6 I N N 
? 6 J N N 
? 6 K N N 
? 6 L N N 
? 6 M N N 
? 6 O N N 
? 6 P N N 
? 6 Q N N 
? 6 R N N 
? 6 S N N 
? 6 T N N 
? 6 V N N 
? 6 W N N 
? 6 Y N N 
? 6 Z N N 
? 6 AA N N 
? 6 BA N N 
? 6 CA N N 
? 6 EA N N 
? 6 FA N N 
? 6 GA N N 
? 6 HA N N 
? 6 JA N N 
? 6 KA N N 
? 6 LA N N 
? 6 MA N N 
? 6 OA N N 
? 6 PA N N 
? 6 QA N N 
? 6 RA N N 
? 6 SA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SD MET 187 A MET 170 1_555 U PT PT . A PT 320 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? 
metalc ? metalc2 G PT PT . A PT 306 1_555 H S SCN . A SCN 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.272 ? 
metalc ? metalc3 G PT PT . A PT 306 1_555 I S SCN . A SCN 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.865 ? 
metalc ? metalc4 G PT PT . A PT 306 1_555 K S SCN . A SCN 310 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.641 ? 
metalc ? metalc5 G PT PT . A PT 306 1_555 L S SCN . A SCN 311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.531 ? 
metalc ? metalc6 G PT PT . A PT 306 1_555 M S SCN . A SCN 312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.714 ? 
metalc ? metalc7 N PT PT . A PT 313 1_555 O S SCN . A SCN 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? 
metalc ? metalc8 N PT PT . A PT 313 1_555 P S SCN . A SCN 315 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.779 ? 
metalc ? metalc9 N PT PT . A PT 313 1_555 Q S SCN . A SCN 316 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? 
metalc ? metalc10 N PT PT . A PT 313 1_555 R S SCN . A SCN 317 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.653 ? 
metalc ? metalc11 N PT PT . A PT 313 1_555 S S SCN . A SCN 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? 
metalc ? metalc12 N PT PT . A PT 313 1_555 T S SCN . A SCN 319 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.827 ? 
metalc ? metalc13 U PT PT . A PT 320 1_555 V S SCN . A SCN 321 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? 
metalc ? metalc14 U PT PT . A PT 320 1_555 W S SCN . A SCN 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.567 ? 
metalc ? metalc15 X PT PT . A PT 323 1_555 Y S SCN . A SCN 324 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? 
metalc ? metalc16 X PT PT . A PT 323 1_555 AA S SCN . A SCN 326 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.833 ? 
metalc ? metalc17 DA PT PT . A PT 329 1_555 FA S SCN . A SCN 331 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.877 ? 
metalc ? metalc18 IA PT PT . A PT 334 1_555 MA S SCN . A SCN 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.796 ? 
metalc ? metalc19 NA PT PT . A PT 339 1_555 OA S SCN . A SCN 340 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.779 ? 
#
_chem_comp.formula           'C N S -1' 
_chem_comp.formula_weight    58.082 
_chem_comp.id                SCN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'THIOCYANATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S C SCN sing 323 n n 
C N SCN trip 324 n n 
#
_atom_sites.entry_id                     5DLB 
_atom_sites.fract_transf_matrix[1][1]    0.008912 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000348 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.02173 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017253 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CXS A 1 301 1 CXS CXS . 
C 3 GOL A 1 302 2 GOL GOL . 
D 3 GOL A 1 303 3 GOL GOL . 
E 4 SO4 A 1 304 4 SO4 SO4 . 
F 3 GOL A 1 305 5 GOL GOL . 
G 5 PT A 1 306 1 PT PT . 
H 6 SCN A 1 307 2 SCN SCN . 
I 6 SCN A 1 308 3 SCN SCN . 
J 6 SCN A 1 309 4 SCN SCN . 
K 6 SCN A 1 310 5 SCN SCN . 
L 6 SCN A 1 311 6 SCN SCN . 
M 6 SCN A 1 312 7 SCN SCN . 
N 5 PT A 1 313 1 PT PT . 
O 6 SCN A 1 314 2 SCN SCN . 
P 6 SCN A 1 315 3 SCN SCN . 
Q 6 SCN A 1 316 4 SCN SCN . 
R 6 SCN A 1 317 5 SCN SCN . 
S 6 SCN A 1 318 6 SCN SCN . 
T 6 SCN A 1 319 7 SCN SCN . 
U 5 PT A 1 320 1 PT PT . 
V 6 SCN A 1 321 2 SCN SCN . 
W 6 SCN A 1 322 3 SCN SCN . 
X 5 PT A 1 323 1 PT PT . 
Y 6 SCN A 1 324 2 SCN SCN . 
Z 6 SCN A 1 325 3 SCN SCN . 
AA 6 SCN A 1 326 4 SCN SCN . 
BA 6 SCN A 1 327 5 SCN SCN . 
CA 6 SCN A 1 328 6 SCN SCN . 
DA 5 PT A 1 329 1 PT PT . 
EA 6 SCN A 1 330 2 SCN SCN . 
FA 6 SCN A 1 331 3 SCN SCN . 
GA 6 SCN A 1 332 4 SCN SCN . 
HA 6 SCN A 1 333 5 SCN SCN . 
IA 5 PT A 1 334 1 PT PT . 
JA 6 SCN A 1 335 2 SCN SCN . 
KA 6 SCN A 1 336 3 SCN SCN . 
LA 6 SCN A 1 337 4 SCN SCN . 
MA 6 SCN A 1 338 5 SCN SCN . 
NA 5 PT A 1 339 1 PT PT . 
OA 6 SCN A 1 340 2 SCN SCN . 
PA 6 SCN A 1 341 3 SCN SCN . 
QA 6 SCN A 1 342 4 SCN SCN . 
RA 6 SCN A 1 343 5 SCN SCN . 
SA 6 SCN A 1 344 6 SCN SCN . 
TA 7 HOH A 1 401 30 HOH HOH . 
TA 7 HOH A 2 402 25 HOH HOH . 
TA 7 HOH A 3 403 49 HOH HOH . 
TA 7 HOH A 4 404 36 HOH HOH . 
TA 7 HOH A 5 405 9 HOH HOH . 
TA 7 HOH A 6 406 45 HOH HOH . 
TA 7 HOH A 7 407 48 HOH HOH . 
TA 7 HOH A 8 408 43 HOH HOH . 
TA 7 HOH A 9 409 41 HOH HOH . 
TA 7 HOH A 10 410 7 HOH HOH . 
TA 7 HOH A 11 411 31 HOH HOH . 
TA 7 HOH A 12 412 16 HOH HOH . 
TA 7 HOH A 13 413 4 HOH HOH . 
TA 7 HOH A 14 414 51 HOH HOH . 
TA 7 HOH A 15 415 6 HOH HOH . 
TA 7 HOH A 16 416 8 HOH HOH . 
TA 7 HOH A 17 417 22 HOH HOH . 
TA 7 HOH A 18 418 12 HOH HOH . 
TA 7 HOH A 19 419 54 HOH HOH . 
TA 7 HOH A 20 420 15 HOH HOH . 
TA 7 HOH A 21 421 40 HOH HOH . 
TA 7 HOH A 22 422 23 HOH HOH . 
TA 7 HOH A 23 423 5 HOH HOH . 
TA 7 HOH A 24 424 66 HOH HOH . 
TA 7 HOH A 25 425 50 HOH HOH . 
TA 7 HOH A 26 426 27 HOH HOH . 
TA 7 HOH A 27 427 63 HOH HOH . 
TA 7 HOH A 28 428 56 HOH HOH . 
TA 7 HOH A 29 429 10 HOH HOH . 
TA 7 HOH A 30 430 18 HOH HOH . 
TA 7 HOH A 31 431 62 HOH HOH . 
TA 7 HOH A 32 432 3 HOH HOH . 
TA 7 HOH A 33 433 29 HOH HOH . 
TA 7 HOH A 34 434 17 HOH HOH . 
TA 7 HOH A 35 435 44 HOH HOH . 
TA 7 HOH A 36 436 20 HOH HOH . 
TA 7 HOH A 37 437 37 HOH HOH . 
TA 7 HOH A 38 438 34 HOH HOH . 
TA 7 HOH A 39 439 52 HOH HOH . 
TA 7 HOH A 40 440 32 HOH HOH . 
TA 7 HOH A 41 441 13 HOH HOH . 
TA 7 HOH A 42 442 38 HOH HOH . 
TA 7 HOH A 43 443 57 HOH HOH . 
TA 7 HOH A 44 444 35 HOH HOH . 
TA 7 HOH A 45 445 19 HOH HOH . 
TA 7 HOH A 46 446 58 HOH HOH . 
TA 7 HOH A 47 447 60 HOH HOH . 
TA 7 HOH A 48 448 39 HOH HOH . 
TA 7 HOH A 49 449 28 HOH HOH . 
TA 7 HOH A 50 450 55 HOH HOH . 
TA 7 HOH A 51 451 11 HOH HOH . 
TA 7 HOH A 52 452 14 HOH HOH . 
TA 7 HOH A 53 453 64 HOH HOH . 
TA 7 HOH A 54 454 1 HOH HOH . 
TA 7 HOH A 55 455 65 HOH HOH . 
TA 7 HOH A 56 456 53 HOH HOH . 
TA 7 HOH A 57 457 42 HOH HOH . 
TA 7 HOH A 58 458 47 HOH HOH . 
TA 7 HOH A 59 459 26 HOH HOH . 
TA 7 HOH A 60 460 2 HOH HOH . 
TA 7 HOH A 61 461 33 HOH HOH . 
TA 7 HOH A 62 462 59 HOH HOH . 
TA 7 HOH A 63 463 24 HOH HOH . 
TA 7 HOH A 64 464 21 HOH HOH . 
TA 7 HOH A 65 465 46 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S SCN . . . I 6 22.158 30.341 -6.164 1 63.17 ? S SCN 308 A 1 
HETATM 2 C C SCN . . . I 6 23.464 30.972 -5.763 1 62.26 ? C SCN 308 A 1 
HETATM 3 N N SCN . . . I 6 24.455 31.492 -5.415 1 55.58 ? N SCN 308 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           313 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           3 
#