data_5DLC # _model_server_result.job_id xLbehhoM8EZG7AydqLlQCw _model_server_result.datetime_utc '2024-12-27 02:55:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5dlc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":301}' # _entry.id 5DLC # _exptl.entry_id 5DLC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5DLC _cell.length_a 150.46 _cell.length_b 150.46 _cell.length_c 86.57 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5DLC _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G 1 1 C,D,H,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 260 n n P O2 PO4 sing 261 n n P O3 PO4 sing 262 n n P O4 PO4 sing 263 n n # _atom_sites.entry_id 5DLC _atom_sites.fract_transf_matrix[1][1] 0.006646 _atom_sites.fract_transf_matrix[1][2] 0.003837 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007674 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011551 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 PO4 A 1 301 1 PO4 PO4 . F 3 HOH A 1 401 110 HOH HOH . F 3 HOH A 2 402 124 HOH HOH . F 3 HOH A 3 403 36 HOH HOH . F 3 HOH A 4 404 121 HOH HOH . F 3 HOH A 5 405 165 HOH HOH . F 3 HOH A 6 406 164 HOH HOH . F 3 HOH A 7 407 35 HOH HOH . F 3 HOH A 8 408 90 HOH HOH . F 3 HOH A 9 409 120 HOH HOH . F 3 HOH A 10 410 108 HOH HOH . F 3 HOH A 11 411 93 HOH HOH . F 3 HOH A 12 412 123 HOH HOH . F 3 HOH A 13 413 118 HOH HOH . F 3 HOH A 14 414 12 HOH HOH . F 3 HOH A 15 415 125 HOH HOH . F 3 HOH A 16 416 153 HOH HOH . F 3 HOH A 17 417 92 HOH HOH . F 3 HOH A 18 418 163 HOH HOH . F 3 HOH A 19 419 102 HOH HOH . F 3 HOH A 20 420 115 HOH HOH . F 3 HOH A 21 421 87 HOH HOH . F 3 HOH A 22 422 13 HOH HOH . F 3 HOH A 23 423 127 HOH HOH . F 3 HOH A 24 424 161 HOH HOH . F 3 HOH A 25 425 162 HOH HOH . F 3 HOH A 26 426 117 HOH HOH . F 3 HOH A 27 427 105 HOH HOH . F 3 HOH A 28 428 155 HOH HOH . F 3 HOH A 29 429 86 HOH HOH . F 3 HOH A 30 430 154 HOH HOH . F 3 HOH A 31 431 109 HOH HOH . F 3 HOH A 32 432 91 HOH HOH . F 3 HOH A 33 433 17 HOH HOH . F 3 HOH A 34 434 98 HOH HOH . F 3 HOH A 35 435 88 HOH HOH . F 3 HOH A 36 436 119 HOH HOH . F 3 HOH A 37 437 106 HOH HOH . F 3 HOH A 38 438 99 HOH HOH . F 3 HOH A 39 439 15 HOH HOH . F 3 HOH A 40 440 112 HOH HOH . F 3 HOH A 41 441 89 HOH HOH . F 3 HOH A 42 442 126 HOH HOH . F 3 HOH A 43 443 113 HOH HOH . F 3 HOH A 44 444 96 HOH HOH . F 3 HOH A 45 445 95 HOH HOH . F 3 HOH A 46 446 94 HOH HOH . F 3 HOH A 47 447 101 HOH HOH . F 3 HOH A 48 448 157 HOH HOH . F 3 HOH A 49 449 122 HOH HOH . F 3 HOH A 50 450 158 HOH HOH . F 3 HOH A 51 451 18 HOH HOH . F 3 HOH A 52 452 160 HOH HOH . F 3 HOH A 53 453 85 HOH HOH . F 3 HOH A 54 454 116 HOH HOH . F 3 HOH A 55 455 156 HOH HOH . F 3 HOH A 56 456 107 HOH HOH . F 3 HOH A 57 457 152 HOH HOH . F 3 HOH A 58 458 103 HOH HOH . F 3 HOH A 59 459 114 HOH HOH . F 3 HOH A 60 460 128 HOH HOH . F 3 HOH A 61 461 97 HOH HOH . F 3 HOH A 62 462 191 HOH HOH . F 3 HOH A 63 463 194 HOH HOH . G 3 HOH B 1 301 20 HOH HOH . G 3 HOH B 2 302 131 HOH HOH . G 3 HOH B 3 303 39 HOH HOH . G 3 HOH B 4 304 33 HOH HOH . G 3 HOH B 5 305 26 HOH HOH . G 3 HOH B 6 306 30 HOH HOH . G 3 HOH B 7 307 166 HOH HOH . G 3 HOH B 8 308 31 HOH HOH . G 3 HOH B 9 309 9 HOH HOH . G 3 HOH B 10 310 2 HOH HOH . G 3 HOH B 11 311 19 HOH HOH . G 3 HOH B 12 312 130 HOH HOH . G 3 HOH B 13 313 29 HOH HOH . G 3 HOH B 14 314 5 HOH HOH . G 3 HOH B 15 315 32 HOH HOH . G 3 HOH B 16 316 104 HOH HOH . G 3 HOH B 17 317 28 HOH HOH . G 3 HOH B 18 318 10 HOH HOH . G 3 HOH B 19 319 22 HOH HOH . G 3 HOH B 20 320 4 HOH HOH . G 3 HOH B 21 321 132 HOH HOH . G 3 HOH B 22 322 27 HOH HOH . G 3 HOH B 23 323 14 HOH HOH . G 3 HOH B 24 324 16 HOH HOH . G 3 HOH B 25 325 38 HOH HOH . G 3 HOH B 26 326 170 HOH HOH . G 3 HOH B 27 327 11 HOH HOH . G 3 HOH B 28 328 25 HOH HOH . G 3 HOH B 29 329 21 HOH HOH . G 3 HOH B 30 330 37 HOH HOH . G 3 HOH B 31 331 168 HOH HOH . G 3 HOH B 32 332 7 HOH HOH . G 3 HOH B 33 333 8 HOH HOH . G 3 HOH B 34 334 167 HOH HOH . G 3 HOH B 35 335 34 HOH HOH . G 3 HOH B 36 336 100 HOH HOH . G 3 HOH B 37 337 171 HOH HOH . G 3 HOH B 38 338 24 HOH HOH . G 3 HOH B 39 339 6 HOH HOH . G 3 HOH B 40 340 169 HOH HOH . G 3 HOH B 41 341 133 HOH HOH . G 3 HOH B 42 342 40 HOH HOH . G 3 HOH B 43 343 172 HOH HOH . G 3 HOH B 44 344 3 HOH HOH . G 3 HOH B 45 345 129 HOH HOH . G 3 HOH B 46 346 23 HOH HOH . G 3 HOH B 47 347 1 HOH HOH . G 3 HOH B 48 348 186 HOH HOH . G 3 HOH B 49 349 187 HOH HOH . H 3 HOH C 1 301 79 HOH HOH . H 3 HOH C 2 302 174 HOH HOH . H 3 HOH C 3 303 73 HOH HOH . H 3 HOH C 4 304 159 HOH HOH . H 3 HOH C 5 305 143 HOH HOH . H 3 HOH C 6 306 58 HOH HOH . H 3 HOH C 7 307 69 HOH HOH . H 3 HOH C 8 308 80 HOH HOH . H 3 HOH C 9 309 150 HOH HOH . H 3 HOH C 10 310 177 HOH HOH . H 3 HOH C 11 311 61 HOH HOH . H 3 HOH C 12 312 84 HOH HOH . H 3 HOH C 13 313 142 HOH HOH . H 3 HOH C 14 314 67 HOH HOH . H 3 HOH C 15 315 74 HOH HOH . H 3 HOH C 16 316 173 HOH HOH . H 3 HOH C 17 317 72 HOH HOH . H 3 HOH C 18 318 138 HOH HOH . H 3 HOH C 19 319 75 HOH HOH . H 3 HOH C 20 320 77 HOH HOH . H 3 HOH C 21 321 68 HOH HOH . H 3 HOH C 22 322 66 HOH HOH . H 3 HOH C 23 323 81 HOH HOH . H 3 HOH C 24 324 82 HOH HOH . H 3 HOH C 25 325 78 HOH HOH . H 3 HOH C 26 326 140 HOH HOH . H 3 HOH C 27 327 70 HOH HOH . H 3 HOH C 28 328 175 HOH HOH . H 3 HOH C 29 329 83 HOH HOH . H 3 HOH C 30 330 71 HOH HOH . H 3 HOH C 31 331 141 HOH HOH . H 3 HOH C 32 332 76 HOH HOH . H 3 HOH C 33 333 139 HOH HOH . H 3 HOH C 34 334 192 HOH HOH . H 3 HOH C 35 335 176 HOH HOH . H 3 HOH C 36 336 149 HOH HOH . H 3 HOH C 37 337 144 HOH HOH . H 3 HOH C 38 338 146 HOH HOH . H 3 HOH C 39 339 195 HOH HOH . H 3 HOH C 40 340 147 HOH HOH . H 3 HOH C 41 341 145 HOH HOH . H 3 HOH C 42 342 193 HOH HOH . H 3 HOH C 43 343 148 HOH HOH . I 3 HOH D 1 301 47 HOH HOH . I 3 HOH D 2 302 44 HOH HOH . I 3 HOH D 3 303 183 HOH HOH . I 3 HOH D 4 304 49 HOH HOH . I 3 HOH D 5 305 41 HOH HOH . I 3 HOH D 6 306 56 HOH HOH . I 3 HOH D 7 307 59 HOH HOH . I 3 HOH D 8 308 181 HOH HOH . I 3 HOH D 9 309 42 HOH HOH . I 3 HOH D 10 310 55 HOH HOH . I 3 HOH D 11 311 179 HOH HOH . I 3 HOH D 12 312 65 HOH HOH . I 3 HOH D 13 313 111 HOH HOH . I 3 HOH D 14 314 134 HOH HOH . I 3 HOH D 15 315 180 HOH HOH . I 3 HOH D 16 316 52 HOH HOH . I 3 HOH D 17 317 46 HOH HOH . I 3 HOH D 18 318 182 HOH HOH . I 3 HOH D 19 319 185 HOH HOH . I 3 HOH D 20 320 43 HOH HOH . I 3 HOH D 21 321 60 HOH HOH . I 3 HOH D 22 322 178 HOH HOH . I 3 HOH D 23 323 62 HOH HOH . I 3 HOH D 24 324 63 HOH HOH . I 3 HOH D 25 325 45 HOH HOH . I 3 HOH D 26 326 135 HOH HOH . I 3 HOH D 27 327 51 HOH HOH . I 3 HOH D 28 328 137 HOH HOH . I 3 HOH D 29 329 57 HOH HOH . I 3 HOH D 30 330 53 HOH HOH . I 3 HOH D 31 331 48 HOH HOH . I 3 HOH D 32 332 136 HOH HOH . I 3 HOH D 33 333 54 HOH HOH . I 3 HOH D 34 334 50 HOH HOH . I 3 HOH D 35 335 184 HOH HOH . I 3 HOH D 36 336 64 HOH HOH . I 3 HOH D 37 337 189 HOH HOH . I 3 HOH D 38 338 188 HOH HOH . I 3 HOH D 39 339 190 HOH HOH . I 3 HOH D 40 340 151 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . E 2 -55.334 53.658 38.628 1 85.26 ? P PO4 301 A 1 HETATM 2 O O1 PO4 . . . E 2 -55.305 53.338 37.152 1 84.97 ? O1 PO4 301 A 1 HETATM 3 O O2 PO4 . . . E 2 -53.923 53.742 39.161 1 82.75 ? O2 PO4 301 A 1 HETATM 4 O O3 PO4 . . . E 2 -56.076 52.566 39.363 1 90.24 ? O3 PO4 301 A 1 HETATM 5 O O4 PO4 . . . E 2 -56.034 54.98 38.843 1 82.8 ? O4 PO4 301 A 1 # _model_server_stats.io_time_ms 83 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 5 #