data_5DLS
#
_model_server_result.job_id            AQ4IcN52hVlQuSvOL68BBg 
_model_server_result.datetime_utc      '2024-11-22 08:12:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5dls 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":301}' 
#
_entry.id    5DLS 
#
_exptl.entry_id    5DLS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              538.64 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1-benzyl-N-(5-{5-[3-(dimethylamino)-2,2-dimethylpropoxy]-1H-indol-2-yl}-6-oxo-1,6-dihydropyridin-3-yl)-1H-pyrazole-4-carboxamide 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          95.14 
_cell.angle_gamma         90 
_cell.entry_id            5DLS 
_cell.length_a            45.032 
_cell.length_b            65.713 
_cell.length_c            58.392 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5DLS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C31 H34 N6 O3' 
_chem_comp.formula_weight    538.64 
_chem_comp.id                5CV 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1-benzyl-N-(5-{5-[3-(dimethylamino)-2,2-dimethylpropoxy]-1H-indol-2-yl}-6-oxo-1,6-dihydropyridin-3-yl)-1H-pyrazole-4-carboxamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C32 N29 5CV sing 1 n n 
C32 C33 5CV sing 2 n n 
C38 C33 5CV doub 3 n y 
C38 C37 5CV sing 4 n y 
N30 N29 5CV sing 5 n y 
N30 C31 5CV doub 6 n y 
N29 C28 5CV sing 7 n y 
C33 C34 5CV sing 8 n y 
C37 C36 5CV doub 9 n y 
C28 C26 5CV doub 10 n y 
C31 C26 5CV sing 11 n y 
C26 C25 5CV sing 12 n n 
C34 C35 5CV doub 13 n y 
C36 C35 5CV sing 14 n y 
C25 O27 5CV doub 15 n n 
C25 N24 5CV sing 16 n n 
N24 C4 5CV sing 17 n n 
C23 N21 5CV sing 18 n n 
C4 C3 5CV sing 19 n n 
C4 C5 5CV doub 20 n n 
C22 N21 5CV sing 21 n n 
N21 C20 5CV sing 22 n n 
C3 C2 5CV doub 23 n n 
C5 N6 5CV sing 24 n n 
C10 C8 5CV doub 25 n y 
C10 C11 5CV sing 26 n y 
C2 C8 5CV sing 27 n n 
C2 C1 5CV sing 28 n n 
C16 C11 5CV doub 29 n y 
C16 C15 5CV sing 30 n y 
C8 N9 5CV sing 31 n y 
C11 C12 5CV sing 32 n y 
C18 O17 5CV sing 33 n n 
C18 C19 5CV sing 34 n n 
N6 C1 5CV sing 35 n n 
C20 C19 5CV sing 36 n n 
C1 O7 5CV doub 37 n n 
O17 C15 5CV sing 38 n n 
C15 C14 5CV doub 39 n y 
N9 C12 5CV sing 40 n y 
C12 C13 5CV doub 41 n y 
C19 C40 5CV sing 42 n n 
C19 C39 5CV sing 43 n n 
C14 C13 5CV sing 44 n y 
C5 H1 5CV sing 45 n n 
C10 H2 5CV sing 46 n n 
C22 H3 5CV sing 47 n n 
C22 H4 5CV sing 48 n n 
C22 H5 5CV sing 49 n n 
C23 H6 5CV sing 50 n n 
C23 H7 5CV sing 51 n n 
C23 H8 5CV sing 52 n n 
C18 H9 5CV sing 53 n n 
C18 H10 5CV sing 54 n n 
C16 H11 5CV sing 55 n n 
C20 H13 5CV sing 56 n n 
C20 H14 5CV sing 57 n n 
C39 H15 5CV sing 58 n n 
C39 H16 5CV sing 59 n n 
C39 H17 5CV sing 60 n n 
C40 H18 5CV sing 61 n n 
C40 H19 5CV sing 62 n n 
C40 H20 5CV sing 63 n n 
C14 H21 5CV sing 64 n n 
C13 H22 5CV sing 65 n n 
N9 H23 5CV sing 66 n n 
C3 H24 5CV sing 67 n n 
N6 H25 5CV sing 68 n n 
N24 H26 5CV sing 69 n n 
C28 H27 5CV sing 70 n n 
C31 H28 5CV sing 71 n n 
C32 H29 5CV sing 72 n n 
C32 H30 5CV sing 73 n n 
C34 H31 5CV sing 74 n n 
C35 H32 5CV sing 75 n n 
C36 H33 5CV sing 76 n n 
C37 H34 5CV sing 77 n n 
C38 H35 5CV sing 78 n n 
#
_atom_sites.entry_id                     5DLS 
_atom_sites.fract_transf_matrix[1][1]    0.022206 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001997 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015218 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017195 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 5CV A 1 301 1 5CV 5C2 . 
C 3 SO4 A 1 302 1 SO4 SO4 . 
D 4 HOH A 1 401 696 HOH HOH . 
D 4 HOH A 2 402 623 HOH HOH . 
D 4 HOH A 3 403 527 HOH HOH . 
D 4 HOH A 4 404 634 HOH HOH . 
D 4 HOH A 5 405 676 HOH HOH . 
D 4 HOH A 6 406 652 HOH HOH . 
D 4 HOH A 7 407 645 HOH HOH . 
D 4 HOH A 8 408 613 HOH HOH . 
D 4 HOH A 9 409 574 HOH HOH . 
D 4 HOH A 10 410 535 HOH HOH . 
D 4 HOH A 11 411 670 HOH HOH . 
D 4 HOH A 12 412 515 HOH HOH . 
D 4 HOH A 13 413 563 HOH HOH . 
D 4 HOH A 14 414 561 HOH HOH . 
D 4 HOH A 15 415 640 HOH HOH . 
D 4 HOH A 16 416 542 HOH HOH . 
D 4 HOH A 17 417 536 HOH HOH . 
D 4 HOH A 18 418 680 HOH HOH . 
D 4 HOH A 19 419 573 HOH HOH . 
D 4 HOH A 20 420 534 HOH HOH . 
D 4 HOH A 21 421 695 HOH HOH . 
D 4 HOH A 22 422 502 HOH HOH . 
D 4 HOH A 23 423 516 HOH HOH . 
D 4 HOH A 24 424 517 HOH HOH . 
D 4 HOH A 25 425 510 HOH HOH . 
D 4 HOH A 26 426 545 HOH HOH . 
D 4 HOH A 27 427 685 HOH HOH . 
D 4 HOH A 28 428 532 HOH HOH . 
D 4 HOH A 29 429 537 HOH HOH . 
D 4 HOH A 30 430 526 HOH HOH . 
D 4 HOH A 31 431 628 HOH HOH . 
D 4 HOH A 32 432 514 HOH HOH . 
D 4 HOH A 33 433 564 HOH HOH . 
D 4 HOH A 34 434 582 HOH HOH . 
D 4 HOH A 35 435 513 HOH HOH . 
D 4 HOH A 36 436 572 HOH HOH . 
D 4 HOH A 37 437 682 HOH HOH . 
D 4 HOH A 38 438 547 HOH HOH . 
D 4 HOH A 39 439 681 HOH HOH . 
D 4 HOH A 40 440 525 HOH HOH . 
D 4 HOH A 41 441 503 HOH HOH . 
D 4 HOH A 42 442 568 HOH HOH . 
D 4 HOH A 43 443 518 HOH HOH . 
D 4 HOH A 44 444 524 HOH HOH . 
D 4 HOH A 45 445 519 HOH HOH . 
D 4 HOH A 46 446 531 HOH HOH . 
D 4 HOH A 47 447 560 HOH HOH . 
D 4 HOH A 48 448 541 HOH HOH . 
D 4 HOH A 49 449 559 HOH HOH . 
D 4 HOH A 50 450 594 HOH HOH . 
D 4 HOH A 51 451 505 HOH HOH . 
D 4 HOH A 52 452 552 HOH HOH . 
D 4 HOH A 53 453 538 HOH HOH . 
D 4 HOH A 54 454 507 HOH HOH . 
D 4 HOH A 55 455 565 HOH HOH . 
D 4 HOH A 56 456 635 HOH HOH . 
D 4 HOH A 57 457 580 HOH HOH . 
D 4 HOH A 58 458 511 HOH HOH . 
D 4 HOH A 59 459 625 HOH HOH . 
D 4 HOH A 60 460 500 HOH HOH . 
D 4 HOH A 61 461 614 HOH HOH . 
D 4 HOH A 62 462 556 HOH HOH . 
D 4 HOH A 63 463 506 HOH HOH . 
D 4 HOH A 64 464 675 HOH HOH . 
D 4 HOH A 65 465 523 HOH HOH . 
D 4 HOH A 66 466 597 HOH HOH . 
D 4 HOH A 67 467 520 HOH HOH . 
D 4 HOH A 68 468 591 HOH HOH . 
D 4 HOH A 69 469 687 HOH HOH . 
D 4 HOH A 70 470 544 HOH HOH . 
D 4 HOH A 71 471 567 HOH HOH . 
D 4 HOH A 72 472 592 HOH HOH . 
D 4 HOH A 73 473 622 HOH HOH . 
D 4 HOH A 74 474 694 HOH HOH . 
D 4 HOH A 75 475 576 HOH HOH . 
D 4 HOH A 76 476 632 HOH HOH . 
D 4 HOH A 77 477 554 HOH HOH . 
D 4 HOH A 78 478 548 HOH HOH . 
D 4 HOH A 79 479 521 HOH HOH . 
D 4 HOH A 80 480 566 HOH HOH . 
D 4 HOH A 81 481 660 HOH HOH . 
D 4 HOH A 82 482 508 HOH HOH . 
D 4 HOH A 83 483 633 HOH HOH . 
D 4 HOH A 84 484 636 HOH HOH . 
D 4 HOH A 85 485 579 HOH HOH . 
D 4 HOH A 86 486 584 HOH HOH . 
D 4 HOH A 87 487 612 HOH HOH . 
D 4 HOH A 88 488 697 HOH HOH . 
D 4 HOH A 89 489 686 HOH HOH . 
D 4 HOH A 90 490 569 HOH HOH . 
D 4 HOH A 91 491 649 HOH HOH . 
D 4 HOH A 92 492 546 HOH HOH . 
D 4 HOH A 93 493 533 HOH HOH . 
D 4 HOH A 94 494 512 HOH HOH . 
D 4 HOH A 95 495 698 HOH HOH . 
D 4 HOH A 96 496 693 HOH HOH . 
D 4 HOH A 97 497 529 HOH HOH . 
D 4 HOH A 98 498 688 HOH HOH . 
D 4 HOH A 99 499 604 HOH HOH . 
D 4 HOH A 100 500 684 HOH HOH . 
D 4 HOH A 101 501 692 HOH HOH . 
D 4 HOH A 102 502 571 HOH HOH . 
D 4 HOH A 103 503 528 HOH HOH . 
D 4 HOH A 104 504 522 HOH HOH . 
D 4 HOH A 105 505 590 HOH HOH . 
D 4 HOH A 106 506 540 HOH HOH . 
D 4 HOH A 107 507 549 HOH HOH . 
D 4 HOH A 108 508 530 HOH HOH . 
D 4 HOH A 109 509 501 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C4 5CV . . . B 2 5.87 -4.046 18.087 1 44.08 ? C4 5CV 301 A 1 
HETATM 2 C C5 5CV . . . B 2 6.442 -2.975 18.753 1 46.51 ? C5 5CV 301 A 1 
HETATM 3 C C8 5CV . . . B 2 2.435 -3.833 19.479 1 43.45 ? C8 5CV 301 A 1 
HETATM 4 C C10 5CV . . . B 2 1.662 -4.855 19.09 1 47.67 ? C10 5CV 301 A 1 
HETATM 5 C C15 5CV . . . B 2 -1.926 -4.787 20.064 1 52.68 ? C15 5CV 301 A 1 
HETATM 6 C C22 5CV . . . B 2 -6.337 -8.054 18.184 1 98.85 ? C22 5CV 301 A 1 
HETATM 7 C C26 5CV . . . B 2 8.433 -5.6 15.767 1 39.22 ? C26 5CV 301 A 1 
HETATM 8 C C23 5CV . . . B 2 -4.37 -9.259 17.338 1 107.65 ? C23 5CV 301 A 1 
HETATM 9 C C18 5CV . . . B 2 -3.049 -6.738 19.593 1 77.63 ? C18 5CV 301 A 1 
HETATM 10 C C16 5CV . . . B 2 -0.786 -5.345 19.477 1 48.4 ? C16 5CV 301 A 1 
HETATM 11 C C2 5CV . . . B 2 3.792 -3.596 19.232 1 42.35 ? C2 5CV 301 A 1 
HETATM 12 O O7 5CV . . . B 2 3.762 -1.791 20.7 1 48.59 ? O7 5CV 301 A 1 
HETATM 13 C C12 5CV . . . B 2 0.424 -3.405 20.18 1 47.18 ? C12 5CV 301 A 1 
HETATM 14 C C11 5CV . . . B 2 0.405 -4.629 19.533 1 48.72 ? C11 5CV 301 A 1 
HETATM 15 N N21 5CV . . . B 2 -4.885 -8.302 18.338 1 102.17 ? N21 5CV 301 A 1 
HETATM 16 C C20 5CV . . . B 2 -4.503 -8.695 19.71 1 93.09 ? C20 5CV 301 A 1 
HETATM 17 C C19 5CV . . . B 2 -4.017 -7.474 20.498 1 91.15 ? C19 5CV 301 A 1 
HETATM 18 C C39 5CV . . . B 2 -3.203 -7.898 21.741 1 93.08 ? C39 5CV 301 A 1 
HETATM 19 C C40 5CV . . . B 2 -5.217 -6.566 20.886 1 85.64 ? C40 5CV 301 A 1 
HETATM 20 O O17 5CV . . . B 2 -3.147 -5.38 20.042 1 61.64 ? O17 5CV 301 A 1 
HETATM 21 C C14 5CV . . . B 2 -1.891 -3.561 20.695 1 49.83 ? C14 5CV 301 A 1 
HETATM 22 C C13 5CV . . . B 2 -0.707 -2.863 20.771 1 49.95 ? C13 5CV 301 A 1 
HETATM 23 N N9 5CV . . . B 2 1.652 -2.943 20.123 1 44.99 ? N9 5CV 301 A 1 
HETATM 24 C C3 5CV . . . B 2 4.532 -4.36 18.351 1 40.16 ? C3 5CV 301 A 1 
HETATM 25 C C1 5CV . . . B 2 4.384 -2.507 19.882 1 44.69 ? C1 5CV 301 A 1 
HETATM 26 N N6 5CV . . . B 2 5.695 -2.172 19.619 1 42.59 ? N6 5CV 301 A 1 
HETATM 27 N N24 5CV . . . B 2 6.591 -4.81 17.234 1 41.66 ? N24 5CV 301 A 1 
HETATM 28 C C25 5CV . . . B 2 7.759 -4.497 16.578 1 42.18 ? C25 5CV 301 A 1 
HETATM 29 O O27 5CV . . . B 2 8.35 -3.408 16.694 1 41.97 ? O27 5CV 301 A 1 
HETATM 30 C C28 5CV . . . B 2 7.73 -6.676 15.348 1 40.64 ? C28 5CV 301 A 1 
HETATM 31 C C31 5CV . . . B 2 9.746 -5.726 15.412 1 40.46 ? C31 5CV 301 A 1 
HETATM 32 N N30 5CV . . . B 2 9.872 -6.91 14.713 1 38.87 ? N30 5CV 301 A 1 
HETATM 33 N N29 5CV . . . B 2 8.551 -7.52 14.715 1 44.92 ? N29 5CV 301 A 1 
HETATM 34 C C32 5CV . . . B 2 8.047 -8.776 14.145 1 48.59 ? C32 5CV 301 A 1 
HETATM 35 C C33 5CV . . . B 2 8.635 -9.941 14.934 1 65.89 ? C33 5CV 301 A 1 
HETATM 36 C C34 5CV . . . B 2 8.159 -10.199 16.241 1 75.38 ? C34 5CV 301 A 1 
HETATM 37 C C35 5CV . . . B 2 8.693 -11.255 17.004 1 72.73 ? C35 5CV 301 A 1 
HETATM 38 C C36 5CV . . . B 2 9.706 -12.042 16.439 1 75.38 ? C36 5CV 301 A 1 
HETATM 39 C C37 5CV . . . B 2 10.182 -11.798 15.133 1 75.17 ? C37 5CV 301 A 1 
HETATM 40 C C38 5CV . . . B 2 9.649 -10.743 14.376 1 64.48 ? C38 5CV 301 A 1 
#
_model_server_stats.io_time_ms              64 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    21 
_model_server_stats.query_time_ms           308 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           40 
#