data_5DP0 # _model_server_result.job_id Obt2ljXbpbkyhzyf-lJhMA _model_server_result.datetime_utc '2024-11-29 04:25:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5dp0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":601}' # _entry.id 5DP0 # _exptl.entry_id 5DP0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 397.441 _entity.id 3 _entity.src_method man _entity.type non-polymer _entity.pdbx_description "4,4'-(2-{3-[(4-fluorophenyl)amino]phenyl}ethene-1,1-diyl)diphenol" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.06 _cell.angle_gamma 90 _cell.entry_id 5DP0 _cell.length_a 56.03 _cell.length_b 83.08 _cell.length_c 58.88 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5DP0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id B _struct_conn.ptnr1_label_atom_id CE _struct_conn.ptnr1_label_comp_id MET _struct_conn.ptnr1_label_seq_id 124 _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id MET _struct_conn.ptnr1_auth_seq_id 421 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id NE2 _struct_conn.ptnr2_label_comp_id HIS _struct_conn.ptnr2_label_seq_id 227 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id HIS _struct_conn.ptnr2_auth_seq_id 524 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.29 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C26 H20 F N O2' _chem_comp.formula_weight 397.441 _chem_comp.id 5ES _chem_comp.mon_nstd_flag . _chem_comp.name "4,4'-(2-{3-[(4-fluorophenyl)amino]phenyl}ethene-1,1-diyl)diphenol" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O01 C02 5ES sing 1 n n C02 C05 5ES doub 2 n y C02 C03 5ES sing 3 n y C05 C06 5ES sing 4 n y C03 C04 5ES doub 5 n y C06 C07 5ES doub 6 n y C04 C07 5ES sing 7 n y C07 C08 5ES sing 8 n n F27 C26 5ES sing 9 n n C08 C09 5ES sing 10 n n C08 C16 5ES doub 11 n n C09 C10 5ES doub 12 n y C09 C15 5ES sing 13 n y C10 C11 5ES sing 14 n y C15 C14 5ES doub 15 n y C11 C12 5ES doub 16 n y C14 C12 5ES sing 17 n y C12 O13 5ES sing 18 n n C16 C17 5ES sing 19 n n C26 C25 5ES doub 20 n y C26 C28 5ES sing 21 n y C25 C24 5ES sing 22 n y C28 C29 5ES doub 23 n y C17 C30 5ES doub 24 n y C17 C18 5ES sing 25 n y C24 C23 5ES doub 26 n y C30 C21 5ES sing 27 n y C29 C23 5ES sing 28 n y C23 N22 5ES sing 29 n n C18 C19 5ES doub 30 n y C21 N22 5ES sing 31 n n C21 C20 5ES doub 32 n y C19 C20 5ES sing 33 n y O01 H1 5ES sing 34 n n C03 H2 5ES sing 35 n n C04 H3 5ES sing 36 n n C05 H4 5ES sing 37 n n C06 H5 5ES sing 38 n n C10 H6 5ES sing 39 n n C11 H7 5ES sing 40 n n O13 H8 5ES sing 41 n n C14 H9 5ES sing 42 n n C15 H10 5ES sing 43 n n C16 H11 5ES sing 44 n n C18 H12 5ES sing 45 n n C19 H13 5ES sing 46 n n C20 H14 5ES sing 47 n n N22 H15 5ES sing 48 n n C24 H16 5ES sing 49 n n C25 H17 5ES sing 50 n n C28 H18 5ES sing 51 n n C29 H19 5ES sing 52 n n C30 H20 5ES sing 53 n n # _atom_sites.entry_id 5DP0 _atom_sites.fract_transf_matrix[1][1] 0.017848 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006872 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012037 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018199 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 5ES A 1 601 1 5ES UNK . F 3 5ES B 1 601 2 5ES UNK . G 4 HOH A 1 701 18 HOH HOH . G 4 HOH A 2 702 55 HOH HOH . G 4 HOH A 3 703 87 HOH HOH . G 4 HOH A 4 704 7 HOH HOH . G 4 HOH A 5 705 88 HOH HOH . G 4 HOH A 6 706 58 HOH HOH . G 4 HOH A 7 707 83 HOH HOH . G 4 HOH A 8 708 33 HOH HOH . G 4 HOH A 9 709 24 HOH HOH . G 4 HOH A 10 710 39 HOH HOH . G 4 HOH A 11 711 5 HOH HOH . G 4 HOH A 12 712 32 HOH HOH . G 4 HOH A 13 713 36 HOH HOH . G 4 HOH A 14 714 13 HOH HOH . G 4 HOH A 15 715 50 HOH HOH . G 4 HOH A 16 716 75 HOH HOH . G 4 HOH A 17 717 60 HOH HOH . G 4 HOH A 18 718 29 HOH HOH . G 4 HOH A 19 719 77 HOH HOH . G 4 HOH A 20 720 8 HOH HOH . G 4 HOH A 21 721 10 HOH HOH . G 4 HOH A 22 722 47 HOH HOH . G 4 HOH A 23 723 68 HOH HOH . G 4 HOH A 24 724 45 HOH HOH . G 4 HOH A 25 725 65 HOH HOH . G 4 HOH A 26 726 4 HOH HOH . G 4 HOH A 27 727 2 HOH HOH . G 4 HOH A 28 728 53 HOH HOH . G 4 HOH A 29 729 23 HOH HOH . G 4 HOH A 30 730 61 HOH HOH . G 4 HOH A 31 731 63 HOH HOH . G 4 HOH A 32 732 81 HOH HOH . G 4 HOH A 33 733 70 HOH HOH . G 4 HOH A 34 734 67 HOH HOH . G 4 HOH A 35 735 89 HOH HOH . G 4 HOH A 36 736 91 HOH HOH . G 4 HOH A 37 737 17 HOH HOH . G 4 HOH A 38 738 92 HOH HOH . H 4 HOH B 1 701 43 HOH HOH . H 4 HOH B 2 702 80 HOH HOH . H 4 HOH B 3 703 19 HOH HOH . H 4 HOH B 4 704 1 HOH HOH . H 4 HOH B 5 705 11 HOH HOH . H 4 HOH B 6 706 15 HOH HOH . H 4 HOH B 7 707 3 HOH HOH . H 4 HOH B 8 708 26 HOH HOH . H 4 HOH B 9 709 34 HOH HOH . H 4 HOH B 10 710 38 HOH HOH . H 4 HOH B 11 711 35 HOH HOH . H 4 HOH B 12 712 52 HOH HOH . H 4 HOH B 13 713 25 HOH HOH . H 4 HOH B 14 714 59 HOH HOH . H 4 HOH B 15 715 85 HOH HOH . H 4 HOH B 16 716 9 HOH HOH . H 4 HOH B 17 717 14 HOH HOH . H 4 HOH B 18 718 21 HOH HOH . H 4 HOH B 19 719 56 HOH HOH . H 4 HOH B 20 720 64 HOH HOH . H 4 HOH B 21 721 95 HOH HOH . H 4 HOH B 22 722 49 HOH HOH . H 4 HOH B 23 723 16 HOH HOH . H 4 HOH B 24 724 22 HOH HOH . H 4 HOH B 25 725 12 HOH HOH . H 4 HOH B 26 726 94 HOH HOH . H 4 HOH B 27 727 41 HOH HOH . H 4 HOH B 28 728 37 HOH HOH . H 4 HOH B 29 729 48 HOH HOH . H 4 HOH B 30 730 44 HOH HOH . H 4 HOH B 31 731 31 HOH HOH . H 4 HOH B 32 732 40 HOH HOH . H 4 HOH B 33 733 20 HOH HOH . H 4 HOH B 34 734 42 HOH HOH . H 4 HOH B 35 735 28 HOH HOH . H 4 HOH B 36 736 71 HOH HOH . H 4 HOH B 37 737 69 HOH HOH . H 4 HOH B 38 738 74 HOH HOH . H 4 HOH B 39 739 78 HOH HOH . H 4 HOH B 40 740 27 HOH HOH . H 4 HOH B 41 741 84 HOH HOH . H 4 HOH B 42 742 82 HOH HOH . H 4 HOH B 43 743 76 HOH HOH . H 4 HOH B 44 744 86 HOH HOH . H 4 HOH B 45 745 66 HOH HOH . H 4 HOH B 46 746 57 HOH HOH . H 4 HOH B 47 747 30 HOH HOH . H 4 HOH B 48 748 72 HOH HOH . H 4 HOH B 49 749 54 HOH HOH . H 4 HOH B 50 750 79 HOH HOH . H 4 HOH B 51 751 73 HOH HOH . H 4 HOH B 52 752 93 HOH HOH . I 4 HOH C 1 701 62 HOH HOH . I 4 HOH C 2 702 90 HOH HOH . I 4 HOH C 3 703 51 HOH HOH . I 4 HOH C 4 704 46 HOH HOH . J 4 HOH D 1 701 6 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O01 5ES . . . F 3 -11.717 20.661 7.395 1 21.74 ? O01 5ES 601 B 1 HETATM 2 C C02 5ES . . . F 3 -10.451 20.389 6.943 1 21.54 ? C02 5ES 601 B 1 HETATM 3 C C03 5ES . . . F 3 -10.051 20.857 5.772 1 20.83 ? C03 5ES 601 B 1 HETATM 4 C C04 5ES . . . F 3 -8.761 20.566 5.361 1 21.05 ? C04 5ES 601 B 1 HETATM 5 C C05 5ES . . . F 3 -9.662 19.675 7.682 1 20.73 ? C05 5ES 601 B 1 HETATM 6 C C06 5ES . . . F 3 -8.417 19.381 7.266 1 19.88 ? C06 5ES 601 B 1 HETATM 7 C C07 5ES . . . F 3 -7.995 19.86 6.064 1 20.53 ? C07 5ES 601 B 1 HETATM 8 C C08 5ES . . . F 3 -6.54 19.559 5.59 1 32.55 ? C08 5ES 601 B 1 HETATM 9 C C09 5ES . . . F 3 -5.803 18.402 6.19 1 31.95 ? C09 5ES 601 B 1 HETATM 10 C C10 5ES . . . F 3 -4.687 18.623 6.968 1 31.82 ? C10 5ES 601 B 1 HETATM 11 C C11 5ES . . . F 3 -3.984 17.528 7.562 1 31.12 ? C11 5ES 601 B 1 HETATM 12 C C12 5ES . . . F 3 -4.43 16.292 7.359 1 31.33 ? C12 5ES 601 B 1 HETATM 13 O O13 5ES . . . F 3 -3.81 15.282 7.873 1 31.85 ? O13 5ES 601 B 1 HETATM 14 C C14 5ES . . . F 3 -5.596 16.052 6.541 1 31.5 ? C14 5ES 601 B 1 HETATM 15 C C15 5ES . . . F 3 -6.26 17.079 5.984 1 31.33 ? C15 5ES 601 B 1 HETATM 16 C C16 5ES . . . F 3 -5.992 20.404 4.703 1 32.69 ? C16 5ES 601 B 1 HETATM 17 C C17 5ES . . . F 3 -4.577 20.297 4.14 1 43.99 ? C17 5ES 601 B 1 HETATM 18 C C18 5ES . . . F 3 -4.117 19.087 3.666 1 43.24 ? C18 5ES 601 B 1 HETATM 19 C C19 5ES . . . F 3 -2.849 18.989 3.172 1 43.9 ? C19 5ES 601 B 1 HETATM 20 C C20 5ES . . . F 3 -2.007 20.132 3.115 1 45.45 ? C20 5ES 601 B 1 HETATM 21 C C21 5ES . . . F 3 -2.455 21.337 3.568 1 48.43 ? C21 5ES 601 B 1 HETATM 22 N N22 5ES . . . F 3 -1.608 22.399 3.516 1 54.98 ? N22 5ES 601 B 1 HETATM 23 C C23 5ES . . . F 3 -1.956 23.587 4.209 1 62.24 ? C23 5ES 601 B 1 HETATM 24 C C24 5ES . . . F 3 -1.747 23.751 5.609 1 66.16 ? C24 5ES 601 B 1 HETATM 25 C C25 5ES . . . F 3 -2.117 24.898 6.223 1 69.25 ? C25 5ES 601 B 1 HETATM 26 C C26 5ES . . . F 3 -2.67 25.875 5.526 1 73.12 ? C26 5ES 601 B 1 HETATM 27 F F27 5ES . . . F 3 -3.011 26.956 6.112 1 82.23 ? F27 5ES 601 B 1 HETATM 28 C C28 5ES . . . F 3 -2.89 25.705 4.118 1 69.71 ? C28 5ES 601 B 1 HETATM 29 C C29 5ES . . . F 3 -2.528 24.579 3.503 1 65.97 ? C29 5ES 601 B 1 HETATM 30 C C30 5ES . . . F 3 -3.74 21.451 4.086 1 45.9 ? C30 5ES 601 B 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 30 #