data_5DPV # _model_server_result.job_id 8Lhj396KymefK9Sp96mJcQ _model_server_result.datetime_utc '2024-11-24 10:39:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5dpv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 5DPV # _exptl.entry_id 5DPV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 394.356 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-({5-amino-1-[(2,6-difluorophenyl)carbonyl]-1H-1,2,4-triazol-3-yl}amino)benzenesulfonamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5DPV _cell.length_a 83.76 _cell.length_b 83.76 _cell.length_c 166.471 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5DPV _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C15 H12 F2 N6 O3 S' _chem_comp.formula_weight 394.356 _chem_comp.id SKE _chem_comp.mon_nstd_flag . _chem_comp.name 4-({5-amino-1-[(2,6-difluorophenyl)carbonyl]-1H-1,2,4-triazol-3-yl}amino)benzenesulfonamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C6 S SKE sing 322 n n O2 S SKE doub 323 n n S N4 SKE sing 324 n n S O1 SKE doub 325 n n N1 C1 SKE sing 326 n n C1 N6 SKE sing 327 n y C1 N2 SKE doub 328 n y C11 F1 SKE sing 329 n n N1 HN1 SKE sing 330 n n N1 HN1A SKE sing 331 n n N2 C2 SKE sing 332 n y N5 C2 SKE doub 333 n y C2 N3 SKE sing 334 n n F2 C15 SKE sing 335 n n N3 C3 SKE sing 336 n n C4 C3 SKE doub 337 n y C3 C8 SKE sing 338 n y N3 HN3 SKE sing 339 n n O3 C9 SKE doub 340 n n C4 C5 SKE sing 341 n y C4 H4 SKE sing 342 n n N4 HN4 SKE sing 343 n n N4 HN4A SKE sing 344 n n C5 C6 SKE doub 345 n y C5 H5 SKE sing 346 n n N6 N5 SKE sing 347 n y C6 C7 SKE sing 348 n y C9 N6 SKE sing 349 n n C8 C7 SKE doub 350 n y C7 H7 SKE sing 351 n n C8 H8 SKE sing 352 n n C9 C10 SKE sing 353 n n C15 C10 SKE doub 354 n y C10 C11 SKE sing 355 n y C11 C12 SKE doub 356 n y C13 C12 SKE sing 357 n y C12 H12 SKE sing 358 n n C14 C13 SKE doub 359 n y C13 H13 SKE sing 360 n n C15 C14 SKE sing 361 n y C14 H14 SKE sing 362 n n # _atom_sites.entry_id 5DPV _atom_sites.fract_transf_matrix[1][1] 0.011939 _atom_sites.fract_transf_matrix[1][2] 0.006893 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013786 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006007 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 5DN A 1 401 1 5DN 035 . C 3 SKE A 1 402 1 SKE JNJ . D 4 HOH A 1 501 24 HOH HOH . D 4 HOH A 2 502 4 HOH HOH . D 4 HOH A 3 503 8 HOH HOH . D 4 HOH A 4 504 14 HOH HOH . D 4 HOH A 5 505 11 HOH HOH . D 4 HOH A 6 506 7 HOH HOH . D 4 HOH A 7 507 3 HOH HOH . D 4 HOH A 8 508 5 HOH HOH . D 4 HOH A 9 509 33 HOH HOH . D 4 HOH A 10 510 25 HOH HOH . D 4 HOH A 11 511 1 HOH HOH . D 4 HOH A 12 512 6 HOH HOH . D 4 HOH A 13 513 39 HOH HOH . D 4 HOH A 14 514 26 HOH HOH . D 4 HOH A 15 515 9 HOH HOH . D 4 HOH A 16 516 22 HOH HOH . D 4 HOH A 17 517 10 HOH HOH . D 4 HOH A 18 518 41 HOH HOH . D 4 HOH A 19 519 18 HOH HOH . D 4 HOH A 20 520 27 HOH HOH . D 4 HOH A 21 521 17 HOH HOH . D 4 HOH A 22 522 13 HOH HOH . D 4 HOH A 23 523 28 HOH HOH . D 4 HOH A 24 524 20 HOH HOH . D 4 HOH A 25 525 19 HOH HOH . D 4 HOH A 26 526 21 HOH HOH . D 4 HOH A 27 527 23 HOH HOH . D 4 HOH A 28 528 40 HOH HOH . D 4 HOH A 29 529 15 HOH HOH . D 4 HOH A 30 530 38 HOH HOH . D 4 HOH A 31 531 34 HOH HOH . D 4 HOH A 32 532 31 HOH HOH . D 4 HOH A 33 533 12 HOH HOH . D 4 HOH A 34 534 36 HOH HOH . D 4 HOH A 35 535 37 HOH HOH . D 4 HOH A 36 536 35 HOH HOH . D 4 HOH A 37 537 30 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SKE . . . C 3 -0.359 -34.628 1.02 1 73.69 ? S SKE 402 A 1 HETATM 2 C C1 SKE . . . C 3 -2.729 -31.019 8.174 1 64.62 ? C1 SKE 402 A 1 HETATM 3 F F1 SKE . . . C 3 -2.6 -29.348 4.231 1 66.27 ? F1 SKE 402 A 1 HETATM 4 N N1 SKE . . . C 3 -2.964 -30.19 9.22 1 61.03 ? N1 SKE 402 A 1 HETATM 5 O O1 SKE . . . C 3 1.01 -34.306 0.732 1 76.51 ? O1 SKE 402 A 1 HETATM 6 C C2 SKE . . . C 3 -2.047 -32.584 6.963 1 66.29 ? C2 SKE 402 A 1 HETATM 7 F F2 SKE . . . C 3 -6.787 -30.267 6.222 1 68.15 ? F2 SKE 402 A 1 HETATM 8 N N2 SKE . . . C 3 -1.96 -32.124 8.24 1 63.6 ? N2 SKE 402 A 1 HETATM 9 O O2 SKE . . . C 3 -1.223 -33.8 0.226 1 71.93 ? O2 SKE 402 A 1 HETATM 10 C C3 SKE . . . C 3 -1.161 -33.924 5.263 1 66.41 ? C3 SKE 402 A 1 HETATM 11 N N3 SKE . . . C 3 -1.408 -33.707 6.572 1 66.66 ? N3 SKE 402 A 1 HETATM 12 O O3 SKE . . . C 3 -4.242 -28.894 7.375 1 59.12 ? O3 SKE 402 A 1 HETATM 13 C C4 SKE . . . C 3 -1.856 -33.206 4.296 1 64.98 ? C4 SKE 402 A 1 HETATM 14 N N4 SKE . . . C 3 -0.629 -36.167 0.674 1 74.68 ? N4 SKE 402 A 1 HETATM 15 C C5 SKE . . . C 3 -1.601 -33.43 2.948 1 66.32 ? C5 SKE 402 A 1 HETATM 16 N N5 SKE . . . C 3 -2.807 -31.861 6.099 1 66.64 ? N5 SKE 402 A 1 HETATM 17 C C6 SKE . . . C 3 -0.652 -34.371 2.567 1 68.38 ? C6 SKE 402 A 1 HETATM 18 N N6 SKE . . . C 3 -3.228 -30.845 6.958 1 66.43 ? N6 SKE 402 A 1 HETATM 19 C C7 SKE . . . C 3 0.043 -35.088 3.534 1 61.22 ? C7 SKE 402 A 1 HETATM 20 C C8 SKE . . . C 3 -0.212 -34.865 4.882 1 64.03 ? C8 SKE 402 A 1 HETATM 21 C C9 SKE . . . C 3 -4.042 -29.811 6.596 1 63.94 ? C9 SKE 402 A 1 HETATM 22 C C10 SKE . . . C 3 -4.686 -29.807 5.241 1 64.53 ? C10 SKE 402 A 1 HETATM 23 C C11 SKE . . . C 3 -3.921 -29.573 4.112 1 65.96 ? C11 SKE 402 A 1 HETATM 24 C C12 SKE . . . C 3 -4.515 -29.569 2.856 1 66.61 ? C12 SKE 402 A 1 HETATM 25 C C13 SKE . . . C 3 -5.88 -29.801 2.733 1 67.29 ? C13 SKE 402 A 1 HETATM 26 C C14 SKE . . . C 3 -6.646 -30.037 3.869 1 68.03 ? C14 SKE 402 A 1 HETATM 27 C C15 SKE . . . C 3 -6.046 -30.039 5.123 1 66.18 ? C15 SKE 402 A 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 27 #