data_5DQ8 # _model_server_result.job_id ITm6XRe8e5GA_edleFwStA _model_server_result.datetime_utc '2024-11-23 05:56:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5dq8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":501}' # _entry.id 5DQ8 # _exptl.entry_id 5DQ8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 281.23 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-[[3-(TRIFLUOROMETHYL)PHENYL]AMINO] BENZOIC ACID' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 117.55 _cell.angle_gamma 90 _cell.entry_id 5DQ8 _cell.length_a 120.819 _cell.length_b 61.446 _cell.length_c 80.416 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5DQ8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,F 1 1 B,D,E,G 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N # _chem_comp.formula 'C14 H10 F3 N O2' _chem_comp.formula_weight 281.23 _chem_comp.id FLF _chem_comp.mon_nstd_flag . _chem_comp.name '2-[[3-(TRIFLUOROMETHYL)PHENYL]AMINO] BENZOIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'FLUFENAMIC ACID' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 FLF doub 83 n y C1 C6 FLF sing 84 n y C1 C7 FLF sing 85 n n O1 C7 FLF doub 86 n n C2 C3 FLF sing 87 n y C2 H2 FLF sing 88 n n C3 C4 FLF doub 89 n y C3 H3 FLF sing 90 n n O2 C7 FLF sing 91 n n O2 HO2 FLF sing 92 n n C4 C5 FLF sing 93 n y C4 H4 FLF sing 94 n n C5 C6 FLF doub 95 n y C5 H5 FLF sing 96 n n C6 N FLF sing 97 n n N C1' FLF sing 98 n n N HN1 FLF sing 99 n n C1' C2' FLF doub 100 n y C1' C6' FLF sing 101 n y C2' C3' FLF sing 102 n y C2' H2' FLF sing 103 n n C3' C4' FLF doub 104 n y C3' C7' FLF sing 105 n n C4' C5' FLF sing 106 n y C4' H4' FLF sing 107 n n C5' C6' FLF doub 108 n y C5' H5' FLF sing 109 n n C6' H6' FLF sing 110 n n C7' F1 FLF sing 111 n n C7' F2 FLF sing 112 n n C7' F3 FLF sing 113 n n # _atom_sites.entry_id 5DQ8 _atom_sites.fract_transf_matrix[1][1] 0.008277 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004318 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016274 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014026 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FLF A 1 501 503 FLF FLF . D 2 FLF B 1 501 502 FLF FLF . E 2 FLF B 1 502 504 FLF FLF . F 3 HOH A 1 601 54 HOH HOH . F 3 HOH A 2 602 31 HOH HOH . F 3 HOH A 3 603 58 HOH HOH . F 3 HOH A 4 604 49 HOH HOH . F 3 HOH A 5 605 17 HOH HOH . F 3 HOH A 6 606 27 HOH HOH . F 3 HOH A 7 607 43 HOH HOH . F 3 HOH A 8 608 71 HOH HOH . F 3 HOH A 9 609 37 HOH HOH . F 3 HOH A 10 610 21 HOH HOH . F 3 HOH A 11 611 13 HOH HOH . F 3 HOH A 12 612 32 HOH HOH . F 3 HOH A 13 613 39 HOH HOH . F 3 HOH A 14 614 9 HOH HOH . F 3 HOH A 15 615 45 HOH HOH . F 3 HOH A 16 616 72 HOH HOH . F 3 HOH A 17 617 63 HOH HOH . F 3 HOH A 18 618 34 HOH HOH . F 3 HOH A 19 619 28 HOH HOH . F 3 HOH A 20 620 4 HOH HOH . F 3 HOH A 21 621 50 HOH HOH . F 3 HOH A 22 622 20 HOH HOH . F 3 HOH A 23 623 70 HOH HOH . F 3 HOH A 24 624 25 HOH HOH . F 3 HOH A 25 625 57 HOH HOH . F 3 HOH A 26 626 83 HOH HOH . F 3 HOH A 27 627 67 HOH HOH . F 3 HOH A 28 628 76 HOH HOH . G 3 HOH B 1 601 79 HOH HOH . G 3 HOH B 2 602 65 HOH HOH . G 3 HOH B 3 603 51 HOH HOH . G 3 HOH B 4 604 78 HOH HOH . G 3 HOH B 5 605 48 HOH HOH . G 3 HOH B 6 606 1 HOH HOH . G 3 HOH B 7 607 64 HOH HOH . G 3 HOH B 8 608 12 HOH HOH . G 3 HOH B 9 609 15 HOH HOH . G 3 HOH B 10 610 8 HOH HOH . G 3 HOH B 11 611 16 HOH HOH . G 3 HOH B 12 612 36 HOH HOH . G 3 HOH B 13 613 75 HOH HOH . G 3 HOH B 14 614 44 HOH HOH . G 3 HOH B 15 615 19 HOH HOH . G 3 HOH B 16 616 29 HOH HOH . G 3 HOH B 17 617 22 HOH HOH . G 3 HOH B 18 618 38 HOH HOH . G 3 HOH B 19 619 23 HOH HOH . G 3 HOH B 20 620 35 HOH HOH . G 3 HOH B 21 621 33 HOH HOH . G 3 HOH B 22 622 41 HOH HOH . G 3 HOH B 23 623 53 HOH HOH . G 3 HOH B 24 624 61 HOH HOH . G 3 HOH B 25 625 11 HOH HOH . G 3 HOH B 26 626 3 HOH HOH . G 3 HOH B 27 627 66 HOH HOH . G 3 HOH B 28 628 26 HOH HOH . G 3 HOH B 29 629 24 HOH HOH . G 3 HOH B 30 630 40 HOH HOH . G 3 HOH B 31 631 68 HOH HOH . G 3 HOH B 32 632 2 HOH HOH . G 3 HOH B 33 633 62 HOH HOH . G 3 HOH B 34 634 42 HOH HOH . G 3 HOH B 35 635 5 HOH HOH . G 3 HOH B 36 636 59 HOH HOH . G 3 HOH B 37 637 84 HOH HOH . G 3 HOH B 38 638 30 HOH HOH . G 3 HOH B 39 639 46 HOH HOH . G 3 HOH B 40 640 14 HOH HOH . G 3 HOH B 41 641 52 HOH HOH . G 3 HOH B 42 642 80 HOH HOH . G 3 HOH B 43 643 7 HOH HOH . G 3 HOH B 44 644 85 HOH HOH . G 3 HOH B 45 645 18 HOH HOH . G 3 HOH B 46 646 56 HOH HOH . G 3 HOH B 47 647 6 HOH HOH . G 3 HOH B 48 648 74 HOH HOH . G 3 HOH B 49 649 10 HOH HOH . G 3 HOH B 50 650 47 HOH HOH . G 3 HOH B 51 651 81 HOH HOH . G 3 HOH B 52 652 55 HOH HOH . G 3 HOH B 53 653 77 HOH HOH . G 3 HOH B 54 654 60 HOH HOH . G 3 HOH B 55 655 69 HOH HOH . G 3 HOH B 56 656 73 HOH HOH . G 3 HOH B 57 657 82 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 FLF . . . D 2 41.624 27.099 -18.636 0.74 34.39 ? C1 FLF 501 B 1 HETATM 2 O O1 FLF . . . D 2 39.367 27.957 -19.041 0.74 58.32 ? O1 FLF 501 B 1 HETATM 3 C C2 FLF . . . D 2 41.945 28.315 -19.225 0.74 37.61 ? C2 FLF 501 B 1 HETATM 4 C C3 FLF . . . D 2 43.276 28.66 -19.409 0.74 25.23 ? C3 FLF 501 B 1 HETATM 5 O O2 FLF . . . D 2 39.578 26.05 -18.079 0.74 32.31 ? O2 FLF 501 B 1 HETATM 6 C C4 FLF . . . D 2 44.289 27.794 -19.03 0.74 27.81 ? C4 FLF 501 B 1 HETATM 7 C C5 FLF . . . D 2 43.957 26.565 -18.455 0.74 45.78 ? C5 FLF 501 B 1 HETATM 8 C C6 FLF . . . D 2 42.619 26.223 -18.262 0.74 28.62 ? C6 FLF 501 B 1 HETATM 9 C C7 FLF . . . D 2 40.113 27.049 -18.588 0.74 47.58 ? C7 FLF 501 B 1 HETATM 10 N N FLF . . . D 2 42.227 25.004 -17.674 0.74 23.9 ? N FLF 501 B 1 HETATM 11 C C1' FLF . . . D 2 43.05 23.86 -17.656 0.74 13.99 ? C1' FLF 501 B 1 HETATM 12 C C2' FLF . . . D 2 42.669 22.764 -18.398 0.74 19.64 ? C2' FLF 501 B 1 HETATM 13 C C3' FLF . . . D 2 43.462 21.641 -18.386 0.74 22.42 ? C3' FLF 501 B 1 HETATM 14 C C4' FLF . . . D 2 44.628 21.575 -17.641 0.74 23.52 ? C4' FLF 501 B 1 HETATM 15 C C5' FLF . . . D 2 44.998 22.675 -16.891 0.74 41.61 ? C5' FLF 501 B 1 HETATM 16 C C6' FLF . . . D 2 44.206 23.821 -16.899 0.74 25.83 ? C6' FLF 501 B 1 HETATM 17 C C7' FLF . . . D 2 43.051 20.477 -19.2 0.74 40.16 ? C7' FLF 501 B 1 HETATM 18 F F1 FLF . . . D 2 41.874 20.105 -18.764 0.74 47.19 ? F1 FLF 501 B 1 HETATM 19 F F2 FLF . . . D 2 42.821 20.816 -20.465 0.74 34.74 ? F2 FLF 501 B 1 HETATM 20 F F3 FLF . . . D 2 44.006 19.553 -19.054 0.74 44.94 ? F3 FLF 501 B 1 HETATM 21 H H2 FLF . . . D 2 41.236 28.933 -19.492 0.74 45.13 ? H2 FLF 501 B 1 HETATM 22 H H3 FLF . . . D 2 43.502 29.518 -19.82 0.74 30.28 ? H3 FLF 501 B 1 HETATM 23 H H4 FLF . . . D 2 45.224 28.037 -19.168 0.74 33.37 ? H4 FLF 501 B 1 HETATM 24 H H5 FLF . . . D 2 44.662 25.95 -18.178 0.74 54.94 ? H5 FLF 501 B 1 HETATM 25 H HN1 FLF . . . D 2 41.403 24.953 -17.287 0.74 28.69 ? HN1 FLF 501 B 1 HETATM 26 H H2' FLF . . . D 2 41.855 22.789 -18.936 0.74 23.57 ? H2' FLF 501 B 1 HETATM 27 H H4' FLF . . . D 2 45.176 20.768 -17.645 0.74 28.22 ? H4' FLF 501 B 1 HETATM 28 H H5' FLF . . . D 2 45.816 22.651 -16.359 0.74 49.93 ? H5' FLF 501 B 1 HETATM 29 H H6' FLF . . . D 2 44.466 24.598 -16.368 0.74 31 ? H6' FLF 501 B 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 29 #