data_5DR2 # _model_server_result.job_id EILew-jDSQKFars1CGZv_g _model_server_result.datetime_utc '2024-10-10 09:29:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5dr2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 5DR2 # _exptl.entry_id 5DR2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 328.16 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(3-bromophenyl)quinoline-4-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5DR2 _cell.length_a 83.26 _cell.length_b 83.26 _cell.length_c 163.85 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5DR2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 138 A ASN 261 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? metalc ? metalc2 A OD2 ASP 151 A ASP 274 1_555 C MG MG . A MG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? metalc ? metalc3 C MG MG . A MG 402 1_555 D O1A ATP . A ATP 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? metalc ? metalc4 C MG MG . A MG 402 1_555 D O2B ATP . A ATP 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? # _chem_comp.formula 'C16 H10 Br N O2' _chem_comp.formula_weight 328.16 _chem_comp.id 5E1 _chem_comp.mon_nstd_flag . _chem_comp.name '2-(3-bromophenyl)quinoline-4-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C12 C13 5E1 doub 1 n y C12 C11 5E1 sing 2 n y C13 C14 5E1 sing 3 n y C11 C10 5E1 doub 4 n y C14 C15 5E1 doub 5 n y C10 C15 5E1 sing 6 n y C10 N 5E1 sing 7 n y C15 C1 5E1 sing 8 n y N C3 5E1 doub 9 n y C1 C 5E1 sing 10 n n C1 C2 5E1 doub 11 n y O C 5E1 doub 12 n n C O1 5E1 sing 13 n n C3 C2 5E1 sing 14 n y C3 C4 5E1 sing 15 n n C9 C4 5E1 doub 16 n y C9 C8 5E1 sing 17 n y C4 C5 5E1 sing 18 n y BR C8 5E1 sing 19 n n C8 C7 5E1 doub 20 n y C5 C6 5E1 doub 21 n y C7 C6 5E1 sing 22 n y C7 H1 5E1 sing 23 n n C6 H2 5E1 sing 24 n n C5 H3 5E1 sing 25 n n C9 H4 5E1 sing 26 n n C2 H5 5E1 sing 27 n n O1 H6 5E1 sing 28 n n C14 H7 5E1 sing 29 n n C13 H8 5E1 sing 30 n n C12 H9 5E1 sing 31 n n C11 H10 5E1 sing 32 n n # _atom_sites.entry_id 5DR2 _atom_sites.fract_transf_matrix[1][1] 0.012011 _atom_sites.fract_transf_matrix[1][2] 0.006934 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013869 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006103 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 5E1 A 1 401 4000 5E1 030 . C 3 MG A 1 402 2 MG MG . D 4 ATP A 1 403 1 ATP ATP . E 5 HOH A 1 501 1 HOH HOH . E 5 HOH A 2 502 5 HOH HOH . E 5 HOH A 3 503 9 HOH HOH . E 5 HOH A 4 504 3 HOH HOH . E 5 HOH A 5 505 7 HOH HOH . E 5 HOH A 6 506 6 HOH HOH . E 5 HOH A 7 507 2 HOH HOH . E 5 HOH A 8 508 4 HOH HOH . E 5 HOH A 9 509 8 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 BR BR 5E1 . . . B 2 -8.888 -16.596 15.449 1 110.63 ? BR 5E1 401 A 1 HETATM 2 C C8 5E1 . . . B 2 -7.925 -14.913 15.657 1 106.6 ? C8 5E1 401 A 1 HETATM 3 C C7 5E1 . . . B 2 -7.082 -14.756 16.726 1 99.01 ? C7 5E1 401 A 1 HETATM 4 C C6 5E1 . . . B 2 -6.454 -13.531 16.855 1 105.3 ? C6 5E1 401 A 1 HETATM 5 C C5 5E1 . . . B 2 -6.67 -12.512 15.936 1 105.33 ? C5 5E1 401 A 1 HETATM 6 C C9 5E1 . . . B 2 -8.179 -13.951 14.709 1 100.44 ? C9 5E1 401 A 1 HETATM 7 C C4 5E1 . . . B 2 -7.538 -12.728 14.853 1 102.41 ? C4 5E1 401 A 1 HETATM 8 C C3 5E1 . . . B 2 -7.794 -11.668 13.877 1 102.83 ? C3 5E1 401 A 1 HETATM 9 C C2 5E1 . . . B 2 -7.206 -10.387 14.038 1 102.84 ? C2 5E1 401 A 1 HETATM 10 N N 5E1 . . . B 2 -8.576 -11.978 12.856 1 96.16 ? N 5E1 401 A 1 HETATM 11 C C10 5E1 . . . B 2 -8.812 -11.019 11.909 1 102.45 ? C10 5E1 401 A 1 HETATM 12 C C15 5E1 . . . B 2 -8.275 -9.713 11.982 1 102.57 ? C15 5E1 401 A 1 HETATM 13 C C1 5E1 . . . B 2 -7.459 -9.43 13.104 1 101.89 ? C1 5E1 401 A 1 HETATM 14 C C 5E1 . . . B 2 -6.838 -8.108 13.279 1 101.29 ? C 5E1 401 A 1 HETATM 15 O O1 5E1 . . . B 2 -6.417 -7.67 14.318 1 113.02 ? O1 5E1 401 A 1 HETATM 16 O O 5E1 . . . B 2 -6.677 -7.301 12.207 1 106.26 ? O 5E1 401 A 1 HETATM 17 C C14 5E1 . . . B 2 -8.553 -8.794 10.951 1 102.37 ? C14 5E1 401 A 1 HETATM 18 C C13 5E1 . . . B 2 -9.337 -9.164 9.906 1 118.16 ? C13 5E1 401 A 1 HETATM 19 C C12 5E1 . . . B 2 -9.884 -10.476 9.831 1 114.19 ? C12 5E1 401 A 1 HETATM 20 C C11 5E1 . . . B 2 -9.621 -11.387 10.802 1 108.11 ? C11 5E1 401 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 16 _model_server_stats.element_count 20 #