data_5DRM # _model_server_result.job_id Tl6DfSONMZVq0YQzpVTg6g _model_server_result.datetime_utc '2024-11-27 02:31:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5drm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":601}' # _entry.id 5DRM # _exptl.entry_id 5DRM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 337.22 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "4,4'-thiene-2,5-diylbis(3-chlorophenol)" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.38 _cell.angle_gamma 90 _cell.entry_id 5DRM _cell.length_a 56.106 _cell.length_b 84.502 _cell.length_c 58.737 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5DRM _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C16 H10 Cl2 O2 S' _chem_comp.formula_weight 337.22 _chem_comp.id 5ET _chem_comp.mon_nstd_flag . _chem_comp.name "4,4'-thiene-2,5-diylbis(3-chlorophenol)" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C02 C03 5ET doub 1 n y C02 C01 5ET sing 2 n y C03 C04 5ET sing 3 n y O01 C01 5ET sing 4 n n C01 C06 5ET doub 5 n y C10 C09 5ET sing 6 n y C10 C07 5ET doub 7 n y C04 C07 5ET sing 8 n n C04 C05 5ET doub 9 n y C09 C08 5ET doub 10 n y C07 S01 5ET sing 11 n y C06 C05 5ET sing 12 n y C05 CL1 5ET sing 13 n n C08 S01 5ET sing 14 n y C08 C11 5ET sing 15 n n C12 C13 5ET doub 16 n y C12 C11 5ET sing 17 n y C13 C14 5ET sing 18 n y C11 C16 5ET doub 19 n y C14 O02 5ET sing 20 n n C14 C15 5ET doub 21 n y C16 C15 5ET sing 22 n y C16 CL2 5ET sing 23 n n C02 H1 5ET sing 24 n n C03 H2 5ET sing 25 n n C06 H3 5ET sing 26 n n O01 H4 5ET sing 27 n n C09 H5 5ET sing 28 n n C10 H6 5ET sing 29 n n C12 H7 5ET sing 30 n n C13 H8 5ET sing 31 n n C15 H9 5ET sing 32 n n O02 H10 5ET sing 33 n n # _atom_sites.entry_id 5DRM _atom_sites.fract_transf_matrix[1][1] 0.017823 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005922 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011834 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01794 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 5ET A 1 601 601 5ET 5ET . F 3 5ET B 1 601 601 5ET 5ET . G 4 HOH A 1 701 3 HOH HOH . G 4 HOH A 2 702 2 HOH HOH . G 4 HOH A 3 703 5 HOH HOH . G 4 HOH A 4 704 8 HOH HOH . G 4 HOH A 5 705 1 HOH HOH . G 4 HOH A 6 706 7 HOH HOH . G 4 HOH A 7 707 224 HOH HOH . G 4 HOH A 8 708 15 HOH HOH . G 4 HOH A 9 709 11 HOH HOH . G 4 HOH A 10 710 228 HOH HOH . G 4 HOH A 11 711 9 HOH HOH . G 4 HOH A 12 712 12 HOH HOH . G 4 HOH A 13 713 232 HOH HOH . G 4 HOH A 14 714 26 HOH HOH . G 4 HOH A 15 715 31 HOH HOH . G 4 HOH A 16 716 14 HOH HOH . G 4 HOH A 17 717 10 HOH HOH . G 4 HOH A 18 718 13 HOH HOH . G 4 HOH A 19 719 35 HOH HOH . G 4 HOH A 20 720 37 HOH HOH . G 4 HOH A 21 721 22 HOH HOH . G 4 HOH A 22 722 23 HOH HOH . G 4 HOH A 23 723 38 HOH HOH . G 4 HOH A 24 724 4 HOH HOH . G 4 HOH A 25 725 54 HOH HOH . G 4 HOH A 26 726 16 HOH HOH . G 4 HOH A 27 727 18 HOH HOH . G 4 HOH A 28 728 17 HOH HOH . G 4 HOH A 29 729 24 HOH HOH . G 4 HOH A 30 730 46 HOH HOH . G 4 HOH A 31 731 30 HOH HOH . G 4 HOH A 32 732 20 HOH HOH . G 4 HOH A 33 733 223 HOH HOH . G 4 HOH A 34 734 73 HOH HOH . G 4 HOH A 35 735 27 HOH HOH . G 4 HOH A 36 736 33 HOH HOH . G 4 HOH A 37 737 21 HOH HOH . G 4 HOH A 38 738 32 HOH HOH . G 4 HOH A 39 739 25 HOH HOH . G 4 HOH A 40 740 58 HOH HOH . G 4 HOH A 41 741 44 HOH HOH . G 4 HOH A 42 742 42 HOH HOH . G 4 HOH A 43 743 51 HOH HOH . G 4 HOH A 44 744 47 HOH HOH . G 4 HOH A 45 745 40 HOH HOH . G 4 HOH A 46 746 205 HOH HOH . G 4 HOH A 47 747 55 HOH HOH . G 4 HOH A 48 748 45 HOH HOH . G 4 HOH A 49 749 49 HOH HOH . G 4 HOH A 50 750 201 HOH HOH . G 4 HOH A 51 751 19 HOH HOH . G 4 HOH A 52 752 39 HOH HOH . G 4 HOH A 53 753 29 HOH HOH . G 4 HOH A 54 754 249 HOH HOH . G 4 HOH A 55 755 52 HOH HOH . G 4 HOH A 56 756 57 HOH HOH . G 4 HOH A 57 757 28 HOH HOH . G 4 HOH A 58 758 41 HOH HOH . G 4 HOH A 59 759 34 HOH HOH . G 4 HOH A 60 760 65 HOH HOH . G 4 HOH A 61 761 50 HOH HOH . G 4 HOH A 62 762 62 HOH HOH . G 4 HOH A 63 763 61 HOH HOH . G 4 HOH A 64 764 217 HOH HOH . G 4 HOH A 65 765 63 HOH HOH . G 4 HOH A 66 766 198 HOH HOH . G 4 HOH A 67 767 53 HOH HOH . G 4 HOH A 68 768 36 HOH HOH . G 4 HOH A 69 769 66 HOH HOH . G 4 HOH A 70 770 69 HOH HOH . G 4 HOH A 71 771 60 HOH HOH . G 4 HOH A 72 772 248 HOH HOH . G 4 HOH A 73 773 6 HOH HOH . G 4 HOH A 74 774 79 HOH HOH . G 4 HOH A 75 775 43 HOH HOH . G 4 HOH A 76 776 204 HOH HOH . G 4 HOH A 77 777 193 HOH HOH . G 4 HOH A 78 778 82 HOH HOH . G 4 HOH A 79 779 76 HOH HOH . G 4 HOH A 80 780 68 HOH HOH . G 4 HOH A 81 781 56 HOH HOH . G 4 HOH A 82 782 67 HOH HOH . G 4 HOH A 83 783 59 HOH HOH . G 4 HOH A 84 784 78 HOH HOH . G 4 HOH A 85 785 83 HOH HOH . G 4 HOH A 86 786 64 HOH HOH . G 4 HOH A 87 787 194 HOH HOH . G 4 HOH A 88 788 71 HOH HOH . G 4 HOH A 89 789 80 HOH HOH . G 4 HOH A 90 790 48 HOH HOH . G 4 HOH A 91 791 244 HOH HOH . G 4 HOH A 92 792 70 HOH HOH . G 4 HOH A 93 793 77 HOH HOH . G 4 HOH A 94 794 81 HOH HOH . G 4 HOH A 95 795 72 HOH HOH . G 4 HOH A 96 796 221 HOH HOH . G 4 HOH A 97 797 238 HOH HOH . G 4 HOH A 98 798 87 HOH HOH . G 4 HOH A 99 799 74 HOH HOH . G 4 HOH A 100 800 237 HOH HOH . G 4 HOH A 101 801 86 HOH HOH . G 4 HOH A 102 802 75 HOH HOH . G 4 HOH A 103 803 230 HOH HOH . G 4 HOH A 104 804 196 HOH HOH . G 4 HOH A 105 805 88 HOH HOH . G 4 HOH A 106 806 85 HOH HOH . G 4 HOH A 107 807 84 HOH HOH . G 4 HOH A 108 808 250 HOH HOH . G 4 HOH A 109 809 90 HOH HOH . G 4 HOH A 110 810 218 HOH HOH . G 4 HOH A 111 811 220 HOH HOH . G 4 HOH A 112 812 89 HOH HOH . G 4 HOH A 113 813 215 HOH HOH . G 4 HOH A 114 814 213 HOH HOH . G 4 HOH A 115 815 91 HOH HOH . G 4 HOH A 116 816 216 HOH HOH . G 4 HOH A 117 817 92 HOH HOH . G 4 HOH A 118 818 195 HOH HOH . G 4 HOH A 119 819 214 HOH HOH . G 4 HOH A 120 820 93 HOH HOH . G 4 HOH A 121 821 94 HOH HOH . G 4 HOH A 122 822 179 HOH HOH . G 4 HOH A 123 823 95 HOH HOH . G 4 HOH A 124 824 192 HOH HOH . G 4 HOH A 125 825 99 HOH HOH . G 4 HOH A 126 826 96 HOH HOH . G 4 HOH A 127 827 97 HOH HOH . G 4 HOH A 128 828 247 HOH HOH . G 4 HOH A 129 829 210 HOH HOH . G 4 HOH A 130 830 98 HOH HOH . G 4 HOH A 131 831 104 HOH HOH . G 4 HOH A 132 832 100 HOH HOH . G 4 HOH A 133 833 203 HOH HOH . G 4 HOH A 134 834 183 HOH HOH . G 4 HOH A 135 835 101 HOH HOH . G 4 HOH A 136 836 102 HOH HOH . G 4 HOH A 137 837 103 HOH HOH . G 4 HOH A 138 838 106 HOH HOH . G 4 HOH A 139 839 105 HOH HOH . G 4 HOH A 140 840 107 HOH HOH . G 4 HOH A 141 841 251 HOH HOH . G 4 HOH A 142 842 108 HOH HOH . H 4 HOH B 1 701 245 HOH HOH . H 4 HOH B 2 702 112 HOH HOH . H 4 HOH B 3 703 109 HOH HOH . H 4 HOH B 4 704 226 HOH HOH . H 4 HOH B 5 705 206 HOH HOH . H 4 HOH B 6 706 242 HOH HOH . H 4 HOH B 7 707 113 HOH HOH . H 4 HOH B 8 708 111 HOH HOH . H 4 HOH B 9 709 114 HOH HOH . H 4 HOH B 10 710 115 HOH HOH . H 4 HOH B 11 711 119 HOH HOH . H 4 HOH B 12 712 234 HOH HOH . H 4 HOH B 13 713 240 HOH HOH . H 4 HOH B 14 714 241 HOH HOH . H 4 HOH B 15 715 124 HOH HOH . H 4 HOH B 16 716 125 HOH HOH . H 4 HOH B 17 717 132 HOH HOH . H 4 HOH B 18 718 117 HOH HOH . H 4 HOH B 19 719 123 HOH HOH . H 4 HOH B 20 720 118 HOH HOH . H 4 HOH B 21 721 140 HOH HOH . H 4 HOH B 22 722 246 HOH HOH . H 4 HOH B 23 723 116 HOH HOH . H 4 HOH B 24 724 133 HOH HOH . H 4 HOH B 25 725 128 HOH HOH . H 4 HOH B 26 726 121 HOH HOH . H 4 HOH B 27 727 120 HOH HOH . H 4 HOH B 28 728 229 HOH HOH . H 4 HOH B 29 729 136 HOH HOH . H 4 HOH B 30 730 147 HOH HOH . H 4 HOH B 31 731 126 HOH HOH . H 4 HOH B 32 732 138 HOH HOH . H 4 HOH B 33 733 130 HOH HOH . H 4 HOH B 34 734 122 HOH HOH . H 4 HOH B 35 735 142 HOH HOH . H 4 HOH B 36 736 137 HOH HOH . H 4 HOH B 37 737 144 HOH HOH . H 4 HOH B 38 738 139 HOH HOH . H 4 HOH B 39 739 134 HOH HOH . H 4 HOH B 40 740 141 HOH HOH . H 4 HOH B 41 741 129 HOH HOH . H 4 HOH B 42 742 146 HOH HOH . H 4 HOH B 43 743 131 HOH HOH . H 4 HOH B 44 744 154 HOH HOH . H 4 HOH B 45 745 202 HOH HOH . H 4 HOH B 46 746 143 HOH HOH . H 4 HOH B 47 747 127 HOH HOH . H 4 HOH B 48 748 159 HOH HOH . H 4 HOH B 49 749 207 HOH HOH . H 4 HOH B 50 750 231 HOH HOH . H 4 HOH B 51 751 145 HOH HOH . H 4 HOH B 52 752 151 HOH HOH . H 4 HOH B 53 753 135 HOH HOH . H 4 HOH B 54 754 153 HOH HOH . H 4 HOH B 55 755 150 HOH HOH . H 4 HOH B 56 756 155 HOH HOH . H 4 HOH B 57 757 156 HOH HOH . H 4 HOH B 58 758 160 HOH HOH . H 4 HOH B 59 759 152 HOH HOH . H 4 HOH B 60 760 164 HOH HOH . H 4 HOH B 61 761 158 HOH HOH . H 4 HOH B 62 762 149 HOH HOH . H 4 HOH B 63 763 148 HOH HOH . H 4 HOH B 64 764 162 HOH HOH . H 4 HOH B 65 765 236 HOH HOH . H 4 HOH B 66 766 165 HOH HOH . H 4 HOH B 67 767 161 HOH HOH . H 4 HOH B 68 768 239 HOH HOH . H 4 HOH B 69 769 166 HOH HOH . H 4 HOH B 70 770 157 HOH HOH . H 4 HOH B 71 771 243 HOH HOH . H 4 HOH B 72 772 167 HOH HOH . H 4 HOH B 73 773 212 HOH HOH . H 4 HOH B 74 774 170 HOH HOH . H 4 HOH B 75 775 168 HOH HOH . H 4 HOH B 76 776 171 HOH HOH . H 4 HOH B 77 777 200 HOH HOH . H 4 HOH B 78 778 176 HOH HOH . H 4 HOH B 79 779 172 HOH HOH . H 4 HOH B 80 780 169 HOH HOH . H 4 HOH B 81 781 252 HOH HOH . H 4 HOH B 82 782 208 HOH HOH . H 4 HOH B 83 783 175 HOH HOH . H 4 HOH B 84 784 174 HOH HOH . H 4 HOH B 85 785 173 HOH HOH . H 4 HOH B 86 786 219 HOH HOH . H 4 HOH B 87 787 209 HOH HOH . H 4 HOH B 88 788 177 HOH HOH . H 4 HOH B 89 789 163 HOH HOH . H 4 HOH B 90 790 178 HOH HOH . H 4 HOH B 91 791 110 HOH HOH . H 4 HOH B 92 792 227 HOH HOH . H 4 HOH B 93 793 180 HOH HOH . H 4 HOH B 94 794 181 HOH HOH . H 4 HOH B 95 795 211 HOH HOH . H 4 HOH B 96 796 199 HOH HOH . H 4 HOH B 97 797 222 HOH HOH . H 4 HOH B 98 798 235 HOH HOH . H 4 HOH B 99 799 182 HOH HOH . H 4 HOH B 100 800 185 HOH HOH . H 4 HOH B 101 801 186 HOH HOH . H 4 HOH B 102 802 184 HOH HOH . H 4 HOH B 103 803 253 HOH HOH . I 4 HOH C 1 701 197 HOH HOH . I 4 HOH C 2 702 233 HOH HOH . I 4 HOH C 3 703 225 HOH HOH . I 4 HOH C 4 704 187 HOH HOH . I 4 HOH C 5 705 188 HOH HOH . I 4 HOH C 6 706 189 HOH HOH . I 4 HOH C 7 707 190 HOH HOH . J 4 HOH D 1 701 191 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 5ET . . . F 3 8.097 4.168 -8.295 1 28.25 ? C01 5ET 601 B 1 HETATM 2 C C02 5ET . . . F 3 7.147 4.039 -9.235 1 28.67 ? C02 5ET 601 B 1 HETATM 3 C C03 5ET . . . F 3 5.84 4.116 -8.908 1 29.75 ? C03 5ET 601 B 1 HETATM 4 C C04 5ET . . . F 3 5.484 4.34 -7.628 1 30.91 ? C04 5ET 601 B 1 HETATM 5 C C05 5ET . . . F 3 6.449 4.477 -6.662 1 29.36 ? C05 5ET 601 B 1 HETATM 6 C C06 5ET . . . F 3 7.761 4.405 -7.012 1 28.73 ? C06 5ET 601 B 1 HETATM 7 CL CL1 5ET . . . F 3 6.094 4.767 -5.014 1 29.72 ? CL1 5ET 601 B 1 HETATM 8 O O01 5ET . . . F 3 9.386 4.081 -8.674 1 27.81 ? O01 5ET 601 B 1 HETATM 9 C C07 5ET . . . F 3 4.009 4.378 -7.35 1 34.45 ? C07 5ET 601 B 1 HETATM 10 S S01 5ET . . . F 3 3.173 5.206 -6.227 1 36.66 ? S01 5ET 601 B 1 HETATM 11 C C08 5ET . . . F 3 1.661 4.698 -6.484 1 42.86 ? C08 5ET 601 B 1 HETATM 12 C C09 5ET . . . F 3 1.75 3.805 -7.539 1 40.42 ? C09 5ET 601 B 1 HETATM 13 C C10 5ET . . . F 3 3.072 3.618 -8.007 1 37.3 ? C10 5ET 601 B 1 HETATM 14 C C11 5ET . . . F 3 0.419 5.139 -5.781 1 45.27 ? C11 5ET 601 B 1 HETATM 15 C C12 5ET . . . F 3 -0.53 5.774 -6.508 1 46.78 ? C12 5ET 601 B 1 HETATM 16 C C13 5ET . . . F 3 -1.687 6.225 -5.944 1 47.44 ? C13 5ET 601 B 1 HETATM 17 C C14 5ET . . . F 3 -1.911 6.035 -4.619 1 47.97 ? C14 5ET 601 B 1 HETATM 18 C C15 5ET . . . F 3 -0.973 5.387 -3.877 1 47.63 ? C15 5ET 601 B 1 HETATM 19 C C16 5ET . . . F 3 0.187 4.951 -4.461 1 46.51 ? C16 5ET 601 B 1 HETATM 20 CL CL2 5ET . . . F 3 1.322 4.18 -3.493 1 37.22 ? CL2 5ET 601 B 1 HETATM 21 O O02 5ET . . . F 3 -3.079 6.47 -4.024 1 48.94 ? O02 5ET 601 B 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 21 #