data_5DS3
#
_model_server_result.job_id            ivYXGiO0Z3DoSXpYLR195g 
_model_server_result.datetime_utc      '2024-10-11 00:25:08' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5ds3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1102}' 
#
_entry.id    5DS3 
#
_exptl.entry_id    5DS3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              434.463 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            4-(3-{[4-(cyclopropylcarbonyl)piperazin-1-yl]carbonyl}-4-fluorobenzyl)phthalazin-1(2H)-one 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5DS3 
_cell.length_a            93.405 
_cell.length_b            93.405 
_cell.length_c            134.197 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5DS3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   disulf 
_struct_conn.details                        ? 
_struct_conn.id                             disulf1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             104 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              845 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            A 
_struct_conn.ptnr2_label_atom_id            SG 
_struct_conn.ptnr2_label_comp_id            CYS 
_struct_conn.ptnr2_label_seq_id             104 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             CYS 
_struct_conn.ptnr2_auth_seq_id              845 
_struct_conn.ptnr2_symmetry                 7_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.059 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C24 H23 F N4 O3' 
_chem_comp.formula_weight    434.463 
_chem_comp.id                09L 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              4-(3-{[4-(cyclopropylcarbonyl)piperazin-1-yl]carbonyl}-4-fluorobenzyl)phthalazin-1(2H)-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     Olaparib 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CBF CBD 09L doub 1 n y 
CBF CBE 09L sing 2 n y 
CBD CBA 09L sing 3 n y 
OAD CBC 09L doub 4 n n 
CBE CBB 09L doub 5 n y 
CBA CBC 09L sing 6 n n 
CBA CAZ 09L doub 7 n y 
CBC NAH 09L sing 8 n n 
CBB CAZ 09L sing 9 n y 
CAZ CAY 09L sing 10 n n 
NAH NAG 09L sing 11 n n 
CAY NAG 09L doub 12 n n 
CAY CAV 09L sing 13 n n 
CAV CAT 09L sing 14 n n 
OAC CAQ 09L doub 15 n n 
CAS CAT 09L doub 16 n y 
CAS CAR 09L sing 17 n y 
CAT CAW 09L sing 18 n y 
CAQ CAR 09L sing 19 n n 
CAQ NAF 09L sing 20 n n 
CAO NAF 09L sing 21 n n 
CAO CAM 09L sing 22 n n 
CAR CAU 09L doub 23 n y 
NAF CAP 09L sing 24 n n 
CAW CAX 09L doub 25 n y 
CAM NAE 09L sing 26 n n 
CAP CAN 09L sing 27 n n 
CAU CAX 09L sing 28 n y 
CAU FAA 09L sing 29 n n 
NAE CAN 09L sing 30 n n 
NAE CAL 09L sing 31 n n 
OAB CAL 09L doub 32 n n 
CAL CAI 09L sing 33 n n 
CAI CAJ 09L sing 34 n n 
CAI CAK 09L sing 35 n n 
CAJ CAK 09L sing 36 n n 
CAJ H1 09L sing 37 n n 
CAJ H2 09L sing 38 n n 
CAK H3 09L sing 39 n n 
CAK H4 09L sing 40 n n 
CAI H5 09L sing 41 n n 
CAM H6 09L sing 42 n n 
CAM H7 09L sing 43 n n 
CAO H8 09L sing 44 n n 
CAO H9 09L sing 45 n n 
CAN H10 09L sing 46 n n 
CAN H11 09L sing 47 n n 
CAP H12 09L sing 48 n n 
CAP H13 09L sing 49 n n 
CAS H14 09L sing 50 n n 
CAX H15 09L sing 51 n n 
CAW H16 09L sing 52 n n 
CAV H17 09L sing 53 n n 
CAV H18 09L sing 54 n n 
CBB H19 09L sing 55 n n 
CBE H20 09L sing 56 n n 
CBF H21 09L sing 57 n n 
CBD H22 09L sing 58 n n 
NAH H23 09L sing 59 n n 
#
_atom_sites.entry_id                     5DS3 
_atom_sites.fract_transf_matrix[1][1]    0.010706 
_atom_sites.fract_transf_matrix[1][2]    0.006181 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012362 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007452 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 1PE A 1 1101 1 1PE 1PE . 
C 3 09L A 1 1102 2001 09L 09L . 
D 4 SO4 A 1 1103 1 SO4 SO4 . 
E 4 SO4 A 1 1104 2 SO4 SO4 . 
F 5 HOH A 1 1201 17 HOH HOH . 
F 5 HOH A 2 1202 28 HOH HOH . 
F 5 HOH A 3 1203 26 HOH HOH . 
F 5 HOH A 4 1204 9 HOH HOH . 
F 5 HOH A 5 1205 18 HOH HOH . 
F 5 HOH A 6 1206 3 HOH HOH . 
F 5 HOH A 7 1207 29 HOH HOH . 
F 5 HOH A 8 1208 4 HOH HOH . 
F 5 HOH A 9 1209 20 HOH HOH . 
F 5 HOH A 10 1210 27 HOH HOH . 
F 5 HOH A 11 1211 15 HOH HOH . 
F 5 HOH A 12 1212 21 HOH HOH . 
F 5 HOH A 13 1213 6 HOH HOH . 
F 5 HOH A 14 1214 7 HOH HOH . 
F 5 HOH A 15 1215 8 HOH HOH . 
F 5 HOH A 16 1216 10 HOH HOH . 
F 5 HOH A 17 1217 12 HOH HOH . 
F 5 HOH A 18 1218 11 HOH HOH . 
F 5 HOH A 19 1219 23 HOH HOH . 
F 5 HOH A 20 1220 14 HOH HOH . 
F 5 HOH A 21 1221 5 HOH HOH . 
F 5 HOH A 22 1222 13 HOH HOH . 
F 5 HOH A 23 1223 25 HOH HOH . 
F 5 HOH A 24 1224 24 HOH HOH . 
F 5 HOH A 25 1225 22 HOH HOH . 
F 5 HOH A 26 1226 16 HOH HOH . 
F 5 HOH A 27 1227 19 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAJ 09L . . . C 3 -1.039 43.569 21.423 1 48.36 ? CAJ 09L 1102 A 1 
HETATM 2 C CAK 09L . . . C 3 -2.154 42.608 21.257 1 48.31 ? CAK 09L 1102 A 1 
HETATM 3 C CAI 09L . . . C 3 -1.449 43.14 20.036 1 46.6 ? CAI 09L 1102 A 1 
HETATM 4 C CAL 09L . . . C 3 -0.529 42.182 19.312 1 44.31 ? CAL 09L 1102 A 1 
HETATM 5 O OAB 09L . . . C 3 0.568 41.902 19.76 1 44.98 ? OAB 09L 1102 A 1 
HETATM 6 N NAE 09L . . . C 3 -0.966 41.654 18.155 1 42.05 ? NAE 09L 1102 A 1 
HETATM 7 C CAM 09L . . . C 3 -2.223 41.91 17.441 1 40.9 ? CAM 09L 1102 A 1 
HETATM 8 C CAO 09L . . . C 3 -3.012 40.627 17.29 1 40.08 ? CAO 09L 1102 A 1 
HETATM 9 C CAN 09L . . . C 3 -0.158 40.639 17.475 1 40.17 ? CAN 09L 1102 A 1 
HETATM 10 C CAP 09L . . . C 3 -0.938 39.36 17.383 1 39.41 ? CAP 09L 1102 A 1 
HETATM 11 N NAF 09L . . . C 3 -2.187 39.594 16.656 1 38.67 ? NAF 09L 1102 A 1 
HETATM 12 C CAQ 09L . . . C 3 -2.422 38.9 15.527 1 37.8 ? CAQ 09L 1102 A 1 
HETATM 13 O OAC 09L . . . C 3 -1.649 38.06 15.108 1 37.21 ? OAC 09L 1102 A 1 
HETATM 14 C CAR 09L . . . C 3 -3.66 39.189 14.739 1 37.58 ? CAR 09L 1102 A 1 
HETATM 15 C CAS 09L . . . C 3 -3.486 39.576 13.412 1 36.49 ? CAS 09L 1102 A 1 
HETATM 16 C CAU 09L . . . C 3 -4.957 38.986 15.174 1 39.23 ? CAU 09L 1102 A 1 
HETATM 17 F FAA 09L . . . C 3 -5.172 38.693 16.473 1 39.32 ? FAA 09L 1102 A 1 
HETATM 18 C CAX 09L . . . C 3 -6.042 39.094 14.346 1 40.25 ? CAX 09L 1102 A 1 
HETATM 19 C CAW 09L . . . C 3 -5.837 39.456 13.027 1 39.8 ? CAW 09L 1102 A 1 
HETATM 20 C CAT 09L . . . C 3 -4.564 39.722 12.548 1 37.75 ? CAT 09L 1102 A 1 
HETATM 21 C CAV 09L . . . C 3 -4.358 40.236 11.14 1 37.88 ? CAV 09L 1102 A 1 
HETATM 22 C CAY 09L . . . C 3 -3.126 39.684 10.459 1 36.91 ? CAY 09L 1102 A 1 
HETATM 23 C CAZ 09L . . . C 3 -3.13 38.36 9.81 1 37.44 ? CAZ 09L 1102 A 1 
HETATM 24 C CBB 09L . . . C 3 -4.256 37.541 9.782 1 38.76 ? CBB 09L 1102 A 1 
HETATM 25 C CBE 09L . . . C 3 -4.209 36.322 9.127 1 39.39 ? CBE 09L 1102 A 1 
HETATM 26 C CBF 09L . . . C 3 -3.055 35.912 8.494 1 38.82 ? CBF 09L 1102 A 1 
HETATM 27 C CBD 09L . . . C 3 -1.924 36.708 8.522 1 37.66 ? CBD 09L 1102 A 1 
HETATM 28 C CBA 09L . . . C 3 -1.95 37.931 9.189 1 36.95 ? CBA 09L 1102 A 1 
HETATM 29 C CBC 09L . . . C 3 -0.764 38.786 9.239 1 36.17 ? CBC 09L 1102 A 1 
HETATM 30 O OAD 09L . . . C 3 0.336 38.439 8.824 1 37.06 ? OAD 09L 1102 A 1 
HETATM 31 N NAH 09L . . . C 3 -0.924 39.965 9.855 1 35.86 ? NAH 09L 1102 A 1 
HETATM 32 N NAG 09L . . . C 3 -2.084 40.441 10.47 1 36.84 ? NAG 09L 1102 A 1 
#
_model_server_stats.io_time_ms              42 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           308 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           32 
#