data_5DSA
#
_model_server_result.job_id            eGo1UeaJQPTe0wFl094kjA 
_model_server_result.datetime_utc      '2024-10-20 03:54:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5dsa 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":101}' 
#
_entry.id    5DSA 
#
_exptl.entry_id    5DSA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              40.078 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CALCIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          111.98 
_cell.angle_gamma         90 
_cell.entry_id            5DSA 
_cell.length_a            65.968 
_cell.length_b            24.542 
_cell.length_c            37.992 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5DSA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 -14.219757 0 35.230535 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A O3' DG 6 A DG 6 1_555 A P 5CM 7 A 5CM 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.604 ? 
covale ? covale2 A O3' 5CM 7 A 5CM 7 1_555 A P DC 8 A DC 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.606 ? 
covale ? covale3 B O3' DG 6 B DG 16 1_555 B P 5CM 7 B 5CM 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.605 ? 
covale ? covale4 B O3' 5CM 7 B 5CM 17 1_555 B P DC 8 B DC 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.598 ? 
metalc ? metalc1 C CA CA . A CA 101 1_555 E O HOH . A HOH 210 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.524 ? 
metalc ? metalc2 C CA CA . A CA 101 1_555 E O HOH . A HOH 221 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.447 ? 
metalc ? metalc3 C CA CA . A CA 101 1_555 E O HOH . A HOH 237 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.225 ? 
metalc ? metalc4 C CA CA . A CA 101 1_555 F O HOH . B HOH 131 2_556 ? A ? ? ? ? ? ? ? ? ? ? 2.355 ? 
metalc ? metalc5 D CA CA . A CA 102 1_555 E O HOH . A HOH 208 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.738 ? 
metalc ? metalc6 D CA CA . A CA 102 1_555 E O HOH . A HOH 210 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.472 ? 
metalc ? metalc7 D CA CA . A CA 102 1_555 E O HOH . A HOH 244 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.517 ? 
hydrog WATSON-CRICK hydrog1 A N3 DC 5 A DC 5 1_555 B N1 DG 6 B DG 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog2 A N4 DC 5 A DC 5 1_555 B O6 DG 6 B DG 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog3 A O2 DC 5 A DC 5 1_555 B N2 DG 6 B DG 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog4 A N1 DG 6 A DG 6 1_555 B N3 DC 5 B DC 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog5 A N2 DG 6 A DG 6 1_555 B O2 DC 5 B DC 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog6 A O6 DG 6 A DG 6 1_555 B N4 DC 5 B DC 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog7 A N3 5CM 7 A 5CM 7 1_555 B N1 DG 4 B DG 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog8 A N4 5CM 7 A 5CM 7 1_555 B O6 DG 4 B DG 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog9 A O2 5CM 7 A 5CM 7 1_555 B N2 DG 4 B DG 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog10 A N3 DC 8 A DC 8 1_555 B N1 DG 3 B DG 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog11 A N4 DC 8 A DC 8 1_555 B O6 DG 3 B DG 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog12 A O2 DC 8 A DC 8 1_555 B N2 DG 3 B DG 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog13 A N1 DG 9 A DG 9 1_555 B N3 DC 2 B DC 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog14 A N2 DG 9 A DG 9 1_555 B O2 DC 2 B DC 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog15 A O6 DG 9 A DG 9 1_555 B N4 DC 2 B DC 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog16 A N1 DG 10 A DG 10 1_555 B N3 DC 1 B DC 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog17 A N2 DG 10 A DG 10 1_555 B O2 DC 1 B DC 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
hydrog WATSON-CRICK hydrog18 A O6 DG 10 A DG 10 1_555 B N4 DC 1 B DC 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
#
_chem_comp.formula           'Ca 2' 
_chem_comp.formula_weight    40.078 
_chem_comp.id                CA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CALCIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5DSA 
_atom_sites.fract_transf_matrix[1][1]    0.015159 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.006118 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.040746 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.028384 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CA A 1 101 1 CA CA . 
D 2 CA A 1 102 2 CA CA . 
E 3 HOH A 1 201 76 HOH HOH . 
E 3 HOH A 2 202 74 HOH HOH . 
E 3 HOH A 3 203 83 HOH HOH . 
E 3 HOH A 4 204 11 HOH HOH . 
E 3 HOH A 5 205 49 HOH HOH . 
E 3 HOH A 6 206 9 HOH HOH . 
E 3 HOH A 7 207 30 HOH HOH . 
E 3 HOH A 8 208 3 HOH HOH . 
E 3 HOH A 9 209 44 HOH HOH . 
E 3 HOH A 10 210 34 HOH HOH . 
E 3 HOH A 11 211 77 HOH HOH . 
E 3 HOH A 12 212 62 HOH HOH . 
E 3 HOH A 13 213 14 HOH HOH . 
E 3 HOH A 14 214 45 HOH HOH . 
E 3 HOH A 15 215 2 HOH HOH . 
E 3 HOH A 16 216 85 HOH HOH . 
E 3 HOH A 17 217 61 HOH HOH . 
E 3 HOH A 18 218 52 HOH HOH . 
E 3 HOH A 19 219 7 HOH HOH . 
E 3 HOH A 20 220 4 HOH HOH . 
E 3 HOH A 21 221 24 HOH HOH . 
E 3 HOH A 22 222 50 HOH HOH . 
E 3 HOH A 23 223 47 HOH HOH . 
E 3 HOH A 24 224 66 HOH HOH . 
E 3 HOH A 25 225 18 HOH HOH . 
E 3 HOH A 26 226 56 HOH HOH . 
E 3 HOH A 27 227 69 HOH HOH . 
E 3 HOH A 28 228 84 HOH HOH . 
E 3 HOH A 29 229 63 HOH HOH . 
E 3 HOH A 30 230 51 HOH HOH . 
E 3 HOH A 31 231 79 HOH HOH . 
E 3 HOH A 32 232 36 HOH HOH . 
E 3 HOH A 33 233 75 HOH HOH . 
E 3 HOH A 34 234 53 HOH HOH . 
E 3 HOH A 35 235 43 HOH HOH . 
E 3 HOH A 36 236 33 HOH HOH . 
E 3 HOH A 37 237 54 HOH HOH . 
E 3 HOH A 38 238 42 HOH HOH . 
E 3 HOH A 39 239 41 HOH HOH . 
E 3 HOH A 40 240 22 HOH HOH . 
E 3 HOH A 41 241 72 HOH HOH . 
E 3 HOH A 42 242 19 HOH HOH . 
E 3 HOH A 43 243 12 HOH HOH . 
E 3 HOH A 44 244 31 HOH HOH . 
E 3 HOH A 45 245 39 HOH HOH . 
E 3 HOH A 46 246 59 HOH HOH . 
F 3 HOH B 1 101 87 HOH HOH . 
F 3 HOH B 2 102 58 HOH HOH . 
F 3 HOH B 3 103 68 HOH HOH . 
F 3 HOH B 4 104 23 HOH HOH . 
F 3 HOH B 5 105 71 HOH HOH . 
F 3 HOH B 6 106 48 HOH HOH . 
F 3 HOH B 7 107 38 HOH HOH . 
F 3 HOH B 8 108 1 HOH HOH . 
F 3 HOH B 9 109 60 HOH HOH . 
F 3 HOH B 10 110 8 HOH HOH . 
F 3 HOH B 11 111 20 HOH HOH . 
F 3 HOH B 12 112 10 HOH HOH . 
F 3 HOH B 13 113 13 HOH HOH . 
F 3 HOH B 14 114 32 HOH HOH . 
F 3 HOH B 15 115 28 HOH HOH . 
F 3 HOH B 16 116 6 HOH HOH . 
F 3 HOH B 17 117 86 HOH HOH . 
F 3 HOH B 18 118 29 HOH HOH . 
F 3 HOH B 19 119 81 HOH HOH . 
F 3 HOH B 20 120 46 HOH HOH . 
F 3 HOH B 21 121 67 HOH HOH . 
F 3 HOH B 22 122 26 HOH HOH . 
F 3 HOH B 23 123 27 HOH HOH . 
F 3 HOH B 24 124 37 HOH HOH . 
F 3 HOH B 25 125 17 HOH HOH . 
F 3 HOH B 26 126 21 HOH HOH . 
F 3 HOH B 27 127 82 HOH HOH . 
F 3 HOH B 28 128 25 HOH HOH . 
F 3 HOH B 29 129 73 HOH HOH . 
F 3 HOH B 30 130 40 HOH HOH . 
F 3 HOH B 31 131 64 HOH HOH . 
F 3 HOH B 32 132 35 HOH HOH . 
F 3 HOH B 33 133 16 HOH HOH . 
F 3 HOH B 34 134 80 HOH HOH . 
F 3 HOH B 35 135 57 HOH HOH . 
F 3 HOH B 36 136 78 HOH HOH . 
F 3 HOH B 37 137 65 HOH HOH . 
F 3 HOH B 38 138 5 HOH HOH . 
F 3 HOH B 39 139 55 HOH HOH . 
F 3 HOH B 40 140 15 HOH HOH . 
F 3 HOH B 41 141 70 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CA 
_atom_site.label_atom_id         CA 
_atom_site.label_comp_id         CA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          A 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -15.278 
_atom_site.Cartn_y               -0.537 
_atom_site.Cartn_z               4.353 
_atom_site.occupancy             0.6 
_atom_site.B_iso_or_equiv        19.91 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CA 
_atom_site.auth_comp_id          CA 
_atom_site.auth_seq_id           101 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    1 
_model_server_stats.query_time_ms           243 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#