data_5DSG # _model_server_result.job_id O6KPQSMRUlX3VB0xoCV_wg _model_server_result.datetime_utc '2024-10-19 16:47:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5dsg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1203}' # _entry.id 5DSG # _exptl.entry_id 5DSG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.461 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'OLEIC ACID' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 94.37 _cell.angle_gamma 90 _cell.entry_id 5DSG _cell.length_a 48.49 _cell.length_b 172.04 _cell.length_c 60.66 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5DSG _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,S 1 1 B,L,M,N,O,P,Q,R,T 2 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 K N N ? 3 N N N ? 3 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 86 A CYS 105 1_555 A SG CYS 166 A CYS 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 A SG CYS 361 A CYS 426 1_555 A SG CYS 364 A CYS 429 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 B SG CYS 86 B CYS 105 1_555 B SG CYS 166 B CYS 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 B SG CYS 361 B CYS 426 1_555 B SG CYS 364 B CYS 429 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? # _chem_comp.formula 'C18 H34 O2' _chem_comp.formula_weight 282.461 _chem_comp.id OLA _chem_comp.mon_nstd_flag . _chem_comp.name 'OLEIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 OLA doub 324 n n C1 O2 OLA sing 325 n n C1 C2 OLA sing 326 n n O2 HO2 OLA sing 327 n n C2 C3 OLA sing 328 n n C2 H21 OLA sing 329 n n C2 H22 OLA sing 330 n n C3 C4 OLA sing 331 n n C3 H31 OLA sing 332 n n C3 H32 OLA sing 333 n n C4 C5 OLA sing 334 n n C4 H41 OLA sing 335 n n C4 H42 OLA sing 336 n n C5 C6 OLA sing 337 n n C5 H51 OLA sing 338 n n C5 H52 OLA sing 339 n n C6 C7 OLA sing 340 n n C6 H61 OLA sing 341 n n C6 H62 OLA sing 342 n n C7 C8 OLA sing 343 n n C7 H71 OLA sing 344 n n C7 H72 OLA sing 345 n n C8 C9 OLA sing 346 n n C8 H81 OLA sing 347 n n C8 H82 OLA sing 348 n n C9 C10 OLA doub 349 z n C9 H9 OLA sing 350 n n C10 C11 OLA sing 351 n n C10 H10 OLA sing 352 n n C11 C12 OLA sing 353 n n C11 H111 OLA sing 354 n n C11 H112 OLA sing 355 n n C12 C13 OLA sing 356 n n C12 H121 OLA sing 357 n n C12 H122 OLA sing 358 n n C13 C14 OLA sing 359 n n C13 H131 OLA sing 360 n n C13 H132 OLA sing 361 n n C14 C15 OLA sing 362 n n C14 H141 OLA sing 363 n n C14 H142 OLA sing 364 n n C15 C16 OLA sing 365 n n C15 H151 OLA sing 366 n n C15 H152 OLA sing 367 n n C16 C17 OLA sing 368 n n C16 H161 OLA sing 369 n n C16 H162 OLA sing 370 n n C17 C18 OLA sing 371 n n C17 H171 OLA sing 372 n n C17 H172 OLA sing 373 n n C18 H181 OLA sing 374 n n C18 H182 OLA sing 375 n n C18 H183 OLA sing 376 n n # _atom_sites.entry_id 5DSG _atom_sites.fract_transf_matrix[1][1] 0.020623 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001576 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005813 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016533 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 0HK A 1 1201 1119 0HK 0HK . D 3 OLA A 1 1202 1120 OLA OLA . E 3 OLA A 1 1203 1121 OLA OLA . F 4 EDT A 1 1204 1122 EDT EDT . G 5 P6G A 1 1205 1124 P6G P6G . H 6 OLC A 1 1206 1125 OLC OLC . I 6 OLC A 1 1207 1126 OLC OLC . J 6 OLC A 1 1208 1127 OLC OLC . K 3 OLA A 1 1209 1124 OLA OLA . L 2 0HK B 1 1201 1119 0HK 0HK . M 6 OLC B 1 1202 1120 OLC OLC . N 3 OLA B 1 1203 1121 OLA OLA . O 3 OLA B 1 1204 1122 OLA OLA . P 5 P6G B 1 1205 1123 P6G P6G . Q 6 OLC B 1 1206 1125 OLC OLC . R 7 PG6 B 1 1207 1126 PG6 PGE . S 8 HOH A 1 1301 1133 HOH HOH . S 8 HOH A 2 1302 1138 HOH HOH . S 8 HOH A 3 1303 1140 HOH HOH . S 8 HOH A 4 1304 1137 HOH HOH . S 8 HOH A 5 1305 1135 HOH HOH . S 8 HOH A 6 1306 1131 HOH HOH . S 8 HOH A 7 1307 1139 HOH HOH . S 8 HOH A 8 1308 1132 HOH HOH . S 8 HOH A 9 1309 1129 HOH HOH . S 8 HOH A 10 1310 1128 HOH HOH . S 8 HOH A 11 1311 1144 HOH HOH . S 8 HOH A 12 1312 1136 HOH HOH . S 8 HOH A 13 1313 1141 HOH HOH . S 8 HOH A 14 1314 1134 HOH HOH . S 8 HOH A 15 1315 1130 HOH HOH . S 8 HOH A 16 1316 1143 HOH HOH . S 8 HOH A 17 1317 1142 HOH HOH . T 8 HOH B 1 1301 1135 HOH HOH . T 8 HOH B 2 1302 1134 HOH HOH . T 8 HOH B 3 1303 1130 HOH HOH . T 8 HOH B 4 1304 1138 HOH HOH . T 8 HOH B 5 1305 1136 HOH HOH . T 8 HOH B 6 1306 1128 HOH HOH . T 8 HOH B 7 1307 1133 HOH HOH . T 8 HOH B 8 1308 1127 HOH HOH . T 8 HOH B 9 1309 1132 HOH HOH . T 8 HOH B 10 1310 1129 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 OLA . . . E 3 36.975 20.137 80.293 1 89.69 ? C1 OLA 1203 A 1 HETATM 2 O O1 OLA . . . E 3 35.759 20.14 80.003 1 91.2 ? O1 OLA 1203 A 1 HETATM 3 O O2 OLA . . . E 3 37.599 21.221 80.299 1 89.83 ? O2 OLA 1203 A 1 HETATM 4 C C2 OLA . . . E 3 37.682 18.846 80.632 1 87.74 ? C2 OLA 1203 A 1 HETATM 5 C C3 OLA . . . E 3 37.193 17.733 79.711 1 86.27 ? C3 OLA 1203 A 1 HETATM 6 C C4 OLA . . . E 3 37.026 16.421 80.47 1 84.92 ? C4 OLA 1203 A 1 HETATM 7 C C5 OLA . . . E 3 38.26 16.123 81.313 1 84.17 ? C5 OLA 1203 A 1 HETATM 8 C C6 OLA . . . E 3 38.647 14.651 81.248 1 83.98 ? C6 OLA 1203 A 1 HETATM 9 C C7 OLA . . . E 3 40.163 14.504 81.188 1 84.18 ? C7 OLA 1203 A 1 HETATM 10 C C8 OLA . . . E 3 40.585 13.052 80.998 1 84.87 ? C8 OLA 1203 A 1 HETATM 11 C C9 OLA . . . E 3 39.824 12.43 79.852 1 84.93 ? C9 OLA 1203 A 1 HETATM 12 C C10 OLA . . . E 3 39.8 10.966 79.709 1 84.73 ? C10 OLA 1203 A 1 HETATM 13 C C11 OLA . . . E 3 41.035 10.158 80.029 1 84.22 ? C11 OLA 1203 A 1 HETATM 14 C C12 OLA . . . E 3 40.708 8.672 79.947 1 84.42 ? C12 OLA 1203 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 349 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 14 #