data_5DSG
#
_model_server_result.job_id            Y6TB2RrgRvcW03OZi-mGfA 
_model_server_result.datetime_utc      '2024-10-19 16:26:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5dsg 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":1205}' 
#
_entry.id    5DSG 
#
_exptl.entry_id    5DSG 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              282.331 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'HEXAETHYLENE GLYCOL' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          94.37 
_cell.angle_gamma         90 
_cell.entry_id            5DSG 
_cell.length_a            48.49 
_cell.length_b            172.04 
_cell.length_c            60.66 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5DSG 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
PISA dimeric 2 software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,J,K,S 1 1 
B,L,M,N,O,P,Q,R,T 2 1 
A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 G N N 
? 5 P N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 86 A CYS 105 1_555 A SG CYS 166 A CYS 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf2 A SG CYS 361 A CYS 426 1_555 A SG CYS 364 A CYS 429 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf3 B SG CYS 86 B CYS 105 1_555 B SG CYS 166 B CYS 185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf4 B SG CYS 361 B CYS 426 1_555 B SG CYS 364 B CYS 429 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
#
_chem_comp.formula           'C12 H26 O7' 
_chem_comp.formula_weight    282.331 
_chem_comp.id                P6G 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'HEXAETHYLENE GLYCOL' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'POLYETHYLENE GLYCOL PEG400' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 C2 P6G sing 441 n n 
O1 H1 P6G sing 442 n n 
C2 C3 P6G sing 443 n n 
C2 H21 P6G sing 444 n n 
C2 H22 P6G sing 445 n n 
C3 O4 P6G sing 446 n n 
C3 H31 P6G sing 447 n n 
C3 H32 P6G sing 448 n n 
O4 C5 P6G sing 449 n n 
C5 C6 P6G sing 450 n n 
C5 H51 P6G sing 451 n n 
C5 H52 P6G sing 452 n n 
C6 O7 P6G sing 453 n n 
C6 H61 P6G sing 454 n n 
C6 H62 P6G sing 455 n n 
O7 C8 P6G sing 456 n n 
C8 C9 P6G sing 457 n n 
C8 H81 P6G sing 458 n n 
C8 H82 P6G sing 459 n n 
C9 O10 P6G sing 460 n n 
C9 H91 P6G sing 461 n n 
C9 H92 P6G sing 462 n n 
O10 C11 P6G sing 463 n n 
C11 C12 P6G sing 464 n n 
C11 H111 P6G sing 465 n n 
C11 H112 P6G sing 466 n n 
C12 O13 P6G sing 467 n n 
C12 H121 P6G sing 468 n n 
C12 H122 P6G sing 469 n n 
O13 C14 P6G sing 470 n n 
C14 C15 P6G sing 471 n n 
C14 H141 P6G sing 472 n n 
C14 H142 P6G sing 473 n n 
C15 O16 P6G sing 474 n n 
C15 H151 P6G sing 475 n n 
C15 H152 P6G sing 476 n n 
O16 C17 P6G sing 477 n n 
C17 C18 P6G sing 478 n n 
C17 H171 P6G sing 479 n n 
C17 H172 P6G sing 480 n n 
C18 O19 P6G sing 481 n n 
C18 H181 P6G sing 482 n n 
C18 H182 P6G sing 483 n n 
O19 H19 P6G sing 484 n n 
#
_atom_sites.entry_id                     5DSG 
_atom_sites.fract_transf_matrix[1][1]    0.020623 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001576 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005813 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016533 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 0HK A 1 1201 1119 0HK 0HK . 
D 3 OLA A 1 1202 1120 OLA OLA . 
E 3 OLA A 1 1203 1121 OLA OLA . 
F 4 EDT A 1 1204 1122 EDT EDT . 
G 5 P6G A 1 1205 1124 P6G P6G . 
H 6 OLC A 1 1206 1125 OLC OLC . 
I 6 OLC A 1 1207 1126 OLC OLC . 
J 6 OLC A 1 1208 1127 OLC OLC . 
K 3 OLA A 1 1209 1124 OLA OLA . 
L 2 0HK B 1 1201 1119 0HK 0HK . 
M 6 OLC B 1 1202 1120 OLC OLC . 
N 3 OLA B 1 1203 1121 OLA OLA . 
O 3 OLA B 1 1204 1122 OLA OLA . 
P 5 P6G B 1 1205 1123 P6G P6G . 
Q 6 OLC B 1 1206 1125 OLC OLC . 
R 7 PG6 B 1 1207 1126 PG6 PGE . 
S 8 HOH A 1 1301 1133 HOH HOH . 
S 8 HOH A 2 1302 1138 HOH HOH . 
S 8 HOH A 3 1303 1140 HOH HOH . 
S 8 HOH A 4 1304 1137 HOH HOH . 
S 8 HOH A 5 1305 1135 HOH HOH . 
S 8 HOH A 6 1306 1131 HOH HOH . 
S 8 HOH A 7 1307 1139 HOH HOH . 
S 8 HOH A 8 1308 1132 HOH HOH . 
S 8 HOH A 9 1309 1129 HOH HOH . 
S 8 HOH A 10 1310 1128 HOH HOH . 
S 8 HOH A 11 1311 1144 HOH HOH . 
S 8 HOH A 12 1312 1136 HOH HOH . 
S 8 HOH A 13 1313 1141 HOH HOH . 
S 8 HOH A 14 1314 1134 HOH HOH . 
S 8 HOH A 15 1315 1130 HOH HOH . 
S 8 HOH A 16 1316 1143 HOH HOH . 
S 8 HOH A 17 1317 1142 HOH HOH . 
T 8 HOH B 1 1301 1135 HOH HOH . 
T 8 HOH B 2 1302 1134 HOH HOH . 
T 8 HOH B 3 1303 1130 HOH HOH . 
T 8 HOH B 4 1304 1138 HOH HOH . 
T 8 HOH B 5 1305 1136 HOH HOH . 
T 8 HOH B 6 1306 1128 HOH HOH . 
T 8 HOH B 7 1307 1133 HOH HOH . 
T 8 HOH B 8 1308 1127 HOH HOH . 
T 8 HOH B 9 1309 1132 HOH HOH . 
T 8 HOH B 10 1310 1129 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 P6G . . . G 5 52.223 19.032 63.63 1 69.36 ? O1 P6G 1205 A 1 
HETATM 2 C C2 P6G . . . G 5 51.415 18.112 62.887 1 68.86 ? C2 P6G 1205 A 1 
HETATM 3 C C3 P6G . . . G 5 51.387 16.765 63.601 1 67.9 ? C3 P6G 1205 A 1 
HETATM 4 O O4 P6G . . . G 5 50.581 16.855 64.775 1 66.66 ? O4 P6G 1205 A 1 
HETATM 5 C C5 P6G . . . G 5 50.597 15.634 65.511 1 65.9 ? C5 P6G 1205 A 1 
HETATM 6 C C6 P6G . . . G 5 49.658 15.727 66.708 1 66.35 ? C6 P6G 1205 A 1 
HETATM 7 O O7 P6G . . . G 5 48.305 15.574 66.285 1 66.18 ? O7 P6G 1205 A 1 
HETATM 8 C C8 P6G . . . G 5 47.39 15.847 67.345 1 67.32 ? C8 P6G 1205 A 1 
HETATM 9 C C9 P6G . . . G 5 45.966 15.598 66.864 1 68.71 ? C9 P6G 1205 A 1 
HETATM 10 O O10 P6G . . . G 5 45.843 16.073 65.526 1 71.14 ? O10 P6G 1205 A 1 
HETATM 11 C C11 P6G . . . G 5 44.52 15.922 65.015 1 74.05 ? C11 P6G 1205 A 1 
HETATM 12 C C12 P6G . . . G 5 44.567 16.113 63.505 1 77.09 ? C12 P6G 1205 A 1 
HETATM 13 O O13 P6G . . . G 5 45.349 17.27 63.216 1 80.95 ? O13 P6G 1205 A 1 
HETATM 14 C C14 P6G . . . G 5 46.033 17.15 61.971 1 83.47 ? C14 P6G 1205 A 1 
HETATM 15 C C15 P6G . . . G 5 46.949 18.353 61.777 1 84.82 ? C15 P6G 1205 A 1 
HETATM 16 O O16 P6G . . . G 5 47.82 18.109 60.675 1 85.41 ? O16 P6G 1205 A 1 
HETATM 17 C C17 P6G . . . G 5 48.697 19.209 60.445 1 86.14 ? C17 P6G 1205 A 1 
HETATM 18 C C18 P6G . . . G 5 49.72 18.821 59.385 1 86.28 ? C18 P6G 1205 A 1 
HETATM 19 O O19 P6G . . . G 5 50.38 17.617 59.79 1 85.91 ? O19 P6G 1205 A 1 
#
_model_server_stats.io_time_ms              20 
_model_server_stats.parse_time_ms           31 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           313 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           19 
#