data_5DTV # _model_server_result.job_id cMqzmNBG2Nueeu8TGAJAiA _model_server_result.datetime_utc '2024-11-25 13:19:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5dtv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":601}' # _entry.id 5DTV # _exptl.entry_id 5DTV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 328.382 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3,4-bis(4-hydroxy-2-methylphenyl)-1H-1lambda~6~-thiophene-1,1-dione _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.53 _cell.angle_gamma 90 _cell.entry_id 5DTV _cell.length_a 55.046 _cell.length_b 82.835 _cell.length_c 58.904 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5DTV _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C18 H16 O4 S' _chem_comp.formula_weight 328.382 _chem_comp.id 5FS _chem_comp.mon_nstd_flag . _chem_comp.name 3,4-bis(4-hydroxy-2-methylphenyl)-1H-1lambda~6~-thiophene-1,1-dione _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O01 C09 5FS sing 1 n n C09 C10 5FS doub 2 n y C09 C08 5FS sing 3 n y C10 C11 5FS sing 4 n y C08 C07 5FS doub 5 n y C11 C05 5FS doub 6 n y C07 C05 5FS sing 7 n y C07 C17 5FS sing 8 n n C05 C02 5FS sing 9 n n C02 C01 5FS doub 10 n n C02 C03 5FS sing 11 n n O02 C14 5FS sing 12 n n C14 C15 5FS doub 13 n y C14 C13 5FS sing 14 n y C15 C16 5FS sing 15 n y C01 S01 5FS sing 16 n n C13 C12 5FS doub 17 n y C16 C06 5FS doub 18 n y C12 C06 5FS sing 19 n y C12 C18 5FS sing 20 n n C06 C03 5FS sing 21 n n C03 C04 5FS doub 22 n n C04 S01 5FS sing 23 n n O03 S01 5FS doub 24 n n S01 O04 5FS doub 25 n n O01 H1 5FS sing 26 n n C04 H2 5FS sing 27 n n C08 H3 5FS sing 28 n n C10 H4 5FS sing 29 n n C13 H5 5FS sing 30 n n C15 H6 5FS sing 31 n n C16 H7 5FS sing 32 n n C17 H8 5FS sing 33 n n C17 H9 5FS sing 34 n n C17 H10 5FS sing 35 n n C18 H11 5FS sing 36 n n C18 H12 5FS sing 37 n n C18 H13 5FS sing 38 n n C01 H14 5FS sing 39 n n C11 H15 5FS sing 40 n n O02 H16 5FS sing 41 n n # _atom_sites.entry_id 5DTV _atom_sites.fract_transf_matrix[1][1] 0.018167 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006803 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012072 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018128 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 5FS A 1 601 1 5FS 5FS . F 3 5FS B 1 601 2 5FS 5FS . G 4 HOH A 1 701 23 HOH HOH . G 4 HOH A 2 702 15 HOH HOH . G 4 HOH A 3 703 4 HOH HOH . G 4 HOH A 4 704 30 HOH HOH . G 4 HOH A 5 705 11 HOH HOH . G 4 HOH A 6 706 27 HOH HOH . G 4 HOH A 7 707 31 HOH HOH . G 4 HOH A 8 708 7 HOH HOH . G 4 HOH A 9 709 5 HOH HOH . G 4 HOH A 10 710 1 HOH HOH . G 4 HOH A 11 711 9 HOH HOH . G 4 HOH A 12 712 12 HOH HOH . G 4 HOH A 13 713 14 HOH HOH . G 4 HOH A 14 714 19 HOH HOH . G 4 HOH A 15 715 29 HOH HOH . H 4 HOH C 1 701 33 HOH HOH . I 4 HOH B 1 701 24 HOH HOH . I 4 HOH B 2 702 21 HOH HOH . I 4 HOH B 3 703 25 HOH HOH . I 4 HOH B 4 704 6 HOH HOH . I 4 HOH B 5 705 2 HOH HOH . I 4 HOH B 6 706 3 HOH HOH . I 4 HOH B 7 707 13 HOH HOH . I 4 HOH B 8 708 10 HOH HOH . I 4 HOH B 9 709 18 HOH HOH . I 4 HOH B 10 710 17 HOH HOH . I 4 HOH B 11 711 26 HOH HOH . I 4 HOH B 12 712 22 HOH HOH . I 4 HOH B 13 713 16 HOH HOH . I 4 HOH B 14 714 8 HOH HOH . I 4 HOH B 15 715 28 HOH HOH . I 4 HOH B 16 716 20 HOH HOH . J 4 HOH D 1 701 32 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O01 5FS . . . F 3 6.659 5.821 36.648 1 65.19 ? O01 5FS 601 B 1 HETATM 2 C C02 5FS . . . F 3 10.915 6.478 33.355 1 60.4 ? C02 5FS 601 B 1 HETATM 3 C C03 5FS . . . F 3 12.087 5.848 33.468 1 57.84 ? C03 5FS 601 B 1 HETATM 4 C C04 5FS . . . F 3 13.043 6.477 32.798 1 57.64 ? C04 5FS 601 B 1 HETATM 5 C C05 5FS . . . F 3 9.808 6.323 34.108 1 61.27 ? C05 5FS 601 B 1 HETATM 6 C C06 5FS . . . F 3 12.374 4.738 34.151 1 54.65 ? C06 5FS 601 B 1 HETATM 7 C C07 5FS . . . F 3 8.543 6.291 33.677 1 58.28 ? C07 5FS 601 B 1 HETATM 8 C C08 5FS . . . F 3 7.545 6.131 34.535 1 59.08 ? C08 5FS 601 B 1 HETATM 9 C C09 5FS . . . F 3 7.703 5.983 35.827 1 63.7 ? C09 5FS 601 B 1 HETATM 10 C C10 5FS . . . F 3 8.947 6.009 36.269 1 64.03 ? C10 5FS 601 B 1 HETATM 11 C C12 5FS . . . F 3 11.742 3.581 33.991 1 49.41 ? C12 5FS 601 B 1 HETATM 12 C C13 5FS . . . F 3 12.107 2.536 34.718 1 49.82 ? C13 5FS 601 B 1 HETATM 13 C C14 5FS . . . F 3 13.079 2.571 35.618 1 52.4 ? C14 5FS 601 B 1 HETATM 14 C C15 5FS . . . F 3 13.709 3.723 35.771 1 53.51 ? C15 5FS 601 B 1 HETATM 15 C C16 5FS . . . F 3 13.36 4.779 35.052 1 55.04 ? C16 5FS 601 B 1 HETATM 16 C C17 5FS . . . F 3 8.076 6.433 32.26 1 53.61 ? C17 5FS 601 B 1 HETATM 17 C C18 5FS . . . F 3 10.608 3.355 33.038 1 47.44 ? C18 5FS 601 B 1 HETATM 18 C C01 5FS . . . F 3 11.069 7.552 32.58 1 61.87 ? C01 5FS 601 B 1 HETATM 19 S S01 5FS . . . F 3 12.579 7.737 31.652 1 70.18 ? S01 5FS 601 B 1 HETATM 20 C C11 5FS . . . F 3 9.958 6.169 35.427 1 62.94 ? C11 5FS 601 B 1 HETATM 21 O O02 5FS . . . F 3 13.416 1.497 36.346 1 52.67 ? O02 5FS 601 B 1 HETATM 22 O O03 5FS . . . F 3 13.226 8.966 31.932 1 69.04 ? O03 5FS 601 B 1 HETATM 23 O O04 5FS . . . F 3 12.428 7.225 30.353 1 71.38 ? O04 5FS 601 B 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 241 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 23 #