data_5DU4 # _model_server_result.job_id tUtUswOrG-m-Xo5TqVKetg _model_server_result.datetime_utc '2025-07-03 23:06:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5du4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 5DU4 # _exptl.entry_id 5DU4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 458.476 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (5R,7S)-5-(4-ethylphenyl)-N-(4-methoxybenzyl)-7-(trifluoromethyl)-4,5,6,7-tetrahydropyrazolo[1,5-a]pyrimidine-3-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5DU4 _cell.length_a 94.83 _cell.length_b 94.83 _cell.length_c 87.51 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5DU4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C24 H25 F3 N4 O2' _chem_comp.formula_weight 458.476 _chem_comp.id 5FF _chem_comp.mon_nstd_flag . _chem_comp.name (5R,7S)-5-(4-ethylphenyl)-N-(4-methoxybenzyl)-7-(trifluoromethyl)-4,5,6,7-tetrahydropyrazolo[1,5-a]pyrimidine-3-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F57 C13 5FF sing 1 n n F58 C13 5FF sing 2 n n C13 C3 5FF sing 3 n n C13 F56 5FF sing 4 n n C3 C2 5FF sing 5 n n C3 N4 5FF sing 6 n n C2 C1 5FF sing 7 n n C12 C11 5FF doub 8 n y C12 C7 5FF sing 9 n y N4 N19 5FF sing 10 n y N4 C5 5FF sing 11 n y C1 C7 5FF sing 12 n n C1 N6 5FF sing 13 n n C11 C10 5FF sing 14 n y N19 C18 5FF doub 15 n y C7 C8 5FF doub 16 n y C10 C32 5FF sing 17 n n C10 C9 5FF doub 18 n y C5 N6 5FF sing 19 n n C5 C17 5FF doub 20 n y C32 C33 5FF sing 21 n n C8 C9 5FF sing 22 n y C18 C17 5FF sing 23 n y C17 C20 5FF sing 24 n n C20 O22 5FF doub 25 n n C20 N21 5FF sing 26 n n N21 C23 5FF sing 27 n n C23 C24 5FF sing 28 n n C24 C25 5FF doub 29 n y C24 C29 5FF sing 30 n y C25 C26 5FF sing 31 n y C29 C28 5FF doub 32 n y C26 C27 5FF doub 33 n y C28 C27 5FF sing 34 n y C27 O30 5FF sing 35 n n O30 C31 5FF sing 36 n n C1 H1 5FF sing 37 n n C2 H2 5FF sing 38 n n C2 H3 5FF sing 39 n n C3 H4 5FF sing 40 n n C8 H5 5FF sing 41 n n C9 H6 5FF sing 42 n n C32 H7 5FF sing 43 n n C32 H8 5FF sing 44 n n C33 H9 5FF sing 45 n n C33 H10 5FF sing 46 n n C33 H11 5FF sing 47 n n C11 H12 5FF sing 48 n n C12 H13 5FF sing 49 n n N6 H14 5FF sing 50 n n C18 H15 5FF sing 51 n n N21 H16 5FF sing 52 n n C23 H17 5FF sing 53 n n C23 H18 5FF sing 54 n n C25 H19 5FF sing 55 n n C26 H20 5FF sing 56 n n C31 H21 5FF sing 57 n n C31 H22 5FF sing 58 n n C31 H23 5FF sing 59 n n C28 H24 5FF sing 60 n n C29 H25 5FF sing 61 n n # _atom_sites.entry_id 5DU4 _atom_sites.fract_transf_matrix[1][1] 0.010545 _atom_sites.fract_transf_matrix[1][2] 0.006088 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012177 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011427 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 5FF A 1 301 1 5FF G3F . C 3 HOH A 1 401 75 HOH HOH . C 3 HOH A 2 402 81 HOH HOH . C 3 HOH A 3 403 83 HOH HOH . C 3 HOH A 4 404 22 HOH HOH . C 3 HOH A 5 405 71 HOH HOH . C 3 HOH A 6 406 25 HOH HOH . C 3 HOH A 7 407 27 HOH HOH . C 3 HOH A 8 408 12 HOH HOH . C 3 HOH A 9 409 47 HOH HOH . C 3 HOH A 10 410 50 HOH HOH . C 3 HOH A 11 411 32 HOH HOH . C 3 HOH A 12 412 53 HOH HOH . C 3 HOH A 13 413 26 HOH HOH . C 3 HOH A 14 414 64 HOH HOH . C 3 HOH A 15 415 91 HOH HOH . C 3 HOH A 16 416 72 HOH HOH . C 3 HOH A 17 417 29 HOH HOH . C 3 HOH A 18 418 70 HOH HOH . C 3 HOH A 19 419 38 HOH HOH . C 3 HOH A 20 420 4 HOH HOH . C 3 HOH A 21 421 87 HOH HOH . C 3 HOH A 22 422 11 HOH HOH . C 3 HOH A 23 423 54 HOH HOH . C 3 HOH A 24 424 36 HOH HOH . C 3 HOH A 25 425 8 HOH HOH . C 3 HOH A 26 426 89 HOH HOH . C 3 HOH A 27 427 74 HOH HOH . C 3 HOH A 28 428 13 HOH HOH . C 3 HOH A 29 429 73 HOH HOH . C 3 HOH A 30 430 17 HOH HOH . C 3 HOH A 31 431 43 HOH HOH . C 3 HOH A 32 432 58 HOH HOH . C 3 HOH A 33 433 33 HOH HOH . C 3 HOH A 34 434 5 HOH HOH . C 3 HOH A 35 435 55 HOH HOH . C 3 HOH A 36 436 14 HOH HOH . C 3 HOH A 37 437 15 HOH HOH . C 3 HOH A 38 438 18 HOH HOH . C 3 HOH A 39 439 65 HOH HOH . C 3 HOH A 40 440 76 HOH HOH . C 3 HOH A 41 441 45 HOH HOH . C 3 HOH A 42 442 37 HOH HOH . C 3 HOH A 43 443 10 HOH HOH . C 3 HOH A 44 444 41 HOH HOH . C 3 HOH A 45 445 46 HOH HOH . C 3 HOH A 46 446 56 HOH HOH . C 3 HOH A 47 447 61 HOH HOH . C 3 HOH A 48 448 52 HOH HOH . C 3 HOH A 49 449 67 HOH HOH . C 3 HOH A 50 450 39 HOH HOH . C 3 HOH A 51 451 16 HOH HOH . C 3 HOH A 52 452 88 HOH HOH . C 3 HOH A 53 453 79 HOH HOH . C 3 HOH A 54 454 80 HOH HOH . C 3 HOH A 55 455 24 HOH HOH . C 3 HOH A 56 456 34 HOH HOH . C 3 HOH A 57 457 31 HOH HOH . C 3 HOH A 58 458 6 HOH HOH . C 3 HOH A 59 459 30 HOH HOH . C 3 HOH A 60 460 2 HOH HOH . C 3 HOH A 61 461 63 HOH HOH . C 3 HOH A 62 462 86 HOH HOH . C 3 HOH A 63 463 23 HOH HOH . C 3 HOH A 64 464 90 HOH HOH . C 3 HOH A 65 465 85 HOH HOH . C 3 HOH A 66 466 49 HOH HOH . C 3 HOH A 67 467 62 HOH HOH . C 3 HOH A 68 468 28 HOH HOH . C 3 HOH A 69 469 92 HOH HOH . C 3 HOH A 70 470 7 HOH HOH . C 3 HOH A 71 471 9 HOH HOH . C 3 HOH A 72 472 77 HOH HOH . C 3 HOH A 73 473 57 HOH HOH . C 3 HOH A 74 474 19 HOH HOH . C 3 HOH A 75 475 78 HOH HOH . C 3 HOH A 76 476 51 HOH HOH . C 3 HOH A 77 477 1 HOH HOH . C 3 HOH A 78 478 84 HOH HOH . C 3 HOH A 79 479 40 HOH HOH . C 3 HOH A 80 480 21 HOH HOH . C 3 HOH A 81 481 3 HOH HOH . C 3 HOH A 82 482 59 HOH HOH . C 3 HOH A 83 483 69 HOH HOH . C 3 HOH A 84 484 42 HOH HOH . C 3 HOH A 85 485 48 HOH HOH . C 3 HOH A 86 486 68 HOH HOH . C 3 HOH A 87 487 66 HOH HOH . C 3 HOH A 88 488 60 HOH HOH . C 3 HOH A 89 489 35 HOH HOH . C 3 HOH A 90 490 82 HOH HOH . C 3 HOH A 91 491 20 HOH HOH . C 3 HOH A 92 492 93 HOH HOH . C 3 HOH A 93 493 44 HOH HOH . C 3 HOH A 94 494 94 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 5FF . . . B 2 -13.675 11.005 37.326 1 27.48 ? C1 5FF 301 A 1 HETATM 2 C C2 5FF . . . B 2 -14.645 11.77 36.413 1 25.06 ? C2 5FF 301 A 1 HETATM 3 C C3 5FF . . . B 2 -14.093 13.141 36.033 1 28.67 ? C3 5FF 301 A 1 HETATM 4 C C5 5FF . . . B 2 -13.304 13.085 38.427 1 25.91 ? C5 5FF 301 A 1 HETATM 5 F F58 5FF . . . B 2 -14.619 15.17 34.951 1 36.47 ? F58 5FF 301 A 1 HETATM 6 C C13 5FF . . . B 2 -15.128 14.005 35.322 1 38.93 ? C13 5FF 301 A 1 HETATM 7 F F56 5FF . . . B 2 -16.141 14.194 36.14 1 38.4 ? F56 5FF 301 A 1 HETATM 8 F F57 5FF . . . B 2 -15.531 13.37 34.241 1 38.15 ? F57 5FF 301 A 1 HETATM 9 C C7 5FF . . . B 2 -14.248 9.681 37.656 1 25.9 ? C7 5FF 301 A 1 HETATM 10 C C8 5FF . . . B 2 -15.276 9.561 38.584 1 25.34 ? C8 5FF 301 A 1 HETATM 11 C C9 5FF . . . B 2 -15.806 8.313 38.886 1 29.53 ? C9 5FF 301 A 1 HETATM 12 C C10 5FF . . . B 2 -15.319 7.172 38.256 1 26.3 ? C10 5FF 301 A 1 HETATM 13 C C32 5FF . . . B 2 -15.887 5.807 38.574 1 30.52 ? C32 5FF 301 A 1 HETATM 14 C C33 5FF . . . B 2 -15.747 5.468 40.041 1 30.97 ? C33 5FF 301 A 1 HETATM 15 C C11 5FF . . . B 2 -14.292 7.294 37.329 1 24.71 ? C11 5FF 301 A 1 HETATM 16 C C12 5FF . . . B 2 -13.76 8.542 37.029 1 25.72 ? C12 5FF 301 A 1 HETATM 17 N N6 5FF . . . B 2 -13.386 11.748 38.554 1 29 ? N6 5FF 301 A 1 HETATM 18 N N4 5FF . . . B 2 -13.624 13.702 37.32 1 28.81 ? N4 5FF 301 A 1 HETATM 19 N N19 5FF . . . B 2 -13.429 15.084 37.5 1 30.73 ? N19 5FF 301 A 1 HETATM 20 C C18 5FF . . . B 2 -12.97 15.289 38.771 1 28.37 ? C18 5FF 301 A 1 HETATM 21 C C17 5FF . . . B 2 -12.86 14.068 39.428 1 29.42 ? C17 5FF 301 A 1 HETATM 22 C C20 5FF . . . B 2 -12.415 13.719 40.803 1 30.39 ? C20 5FF 301 A 1 HETATM 23 O O22 5FF . . . B 2 -12.427 12.555 41.184 1 32.33 ? O22 5FF 301 A 1 HETATM 24 N N21 5FF . . . B 2 -11.982 14.72 41.573 1 39.33 ? N21 5FF 301 A 1 HETATM 25 C C23 5FF . . . B 2 -11.524 14.49 42.931 1 46.4 ? C23 5FF 301 A 1 HETATM 26 C C24 5FF . . . B 2 -12.654 14.894 43.85 1 53.61 ? C24 5FF 301 A 1 HETATM 27 C C25 5FF . . . B 2 -12.821 16.23 44.198 1 61.39 ? C25 5FF 301 A 1 HETATM 28 C C26 5FF . . . B 2 -13.861 16.609 45.039 1 64.46 ? C26 5FF 301 A 1 HETATM 29 C C27 5FF . . . B 2 -14.745 15.656 45.528 1 69.39 ? C27 5FF 301 A 1 HETATM 30 O O30 5FF . . . B 2 -15.77 16.042 46.357 1 73.06 ? O30 5FF 301 A 1 HETATM 31 C C31 5FF . . . B 2 -16.877 15.172 46.592 1 76.01 ? C31 5FF 301 A 1 HETATM 32 C C28 5FF . . . B 2 -14.58 14.319 45.176 1 67.21 ? C28 5FF 301 A 1 HETATM 33 C C29 5FF . . . B 2 -13.537 13.939 44.337 1 59.7 ? C29 5FF 301 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 347 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 33 #