data_5DU8 # _model_server_result.job_id rDjAlKYmRcz9hWcVqIM65Q _model_server_result.datetime_utc '2025-07-31 03:09:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5du8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":301}' # _entry.id 5DU8 # _exptl.entry_id 5DU8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 447.429 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (5R,7S)-5-(4-ethylphenyl)-N-[(5-fluoropyridin-2-yl)methyl]-7-(trifluoromethyl)-4,5,6,7-tetrahydropyrazolo[1,5-a]pyrimidine-3-carboxamide _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5DU8 _cell.length_a 51.39 _cell.length_b 115.98 _cell.length_c 171.49 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5DU8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'C22 H21 F4 N5 O' _chem_comp.formula_weight 447.429 _chem_comp.id 5FK _chem_comp.mon_nstd_flag . _chem_comp.name (5R,7S)-5-(4-ethylphenyl)-N-[(5-fluoropyridin-2-yl)methyl]-7-(trifluoromethyl)-4,5,6,7-tetrahydropyrazolo[1,5-a]pyrimidine-3-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F30 C27 5FK sing 1 n n C26 C27 5FK doub 2 n y C26 C25 5FK sing 3 n y C27 C28 5FK sing 4 n y C25 C24 5FK doub 5 n y C28 N29 5FK doub 6 n y C24 N29 5FK sing 7 n y C24 C23 5FK sing 8 n n C23 N21 5FK sing 9 n n N21 C20 5FK sing 10 n n C20 O22 5FK doub 11 n n C20 C17 5FK sing 12 n n C18 C17 5FK sing 13 n y C18 N19 5FK doub 14 n y C17 C5 5FK doub 15 n y N19 N4 5FK sing 16 n y C5 N4 5FK sing 17 n y C5 N6 5FK sing 18 n n N4 C3 5FK sing 19 n n F58 C13 5FK sing 20 n n N6 C1 5FK sing 21 n n F56 C13 5FK sing 22 n n C3 C13 5FK sing 23 n n C3 C2 5FK sing 24 n n C13 F57 5FK sing 25 n n C1 C2 5FK sing 26 n n C1 C7 5FK sing 27 n n C8 C7 5FK doub 28 n y C8 C9 5FK sing 29 n y C7 C12 5FK sing 30 n y C9 C10 5FK doub 31 n y C12 C11 5FK doub 32 n y C10 C11 5FK sing 33 n y C10 C32 5FK sing 34 n n C33 C32 5FK sing 35 n n C1 H1 5FK sing 36 n n C2 H2 5FK sing 37 n n C2 H3 5FK sing 38 n n C3 H4 5FK sing 39 n n C8 H5 5FK sing 40 n n C9 H6 5FK sing 41 n n C11 H7 5FK sing 42 n n C12 H8 5FK sing 43 n n C18 H9 5FK sing 44 n n C23 H10 5FK sing 45 n n C23 H11 5FK sing 46 n n C25 H12 5FK sing 47 n n C26 H13 5FK sing 48 n n C28 H14 5FK sing 49 n n C32 H15 5FK sing 50 n n C32 H16 5FK sing 51 n n C33 H17 5FK sing 52 n n C33 H18 5FK sing 53 n n C33 H19 5FK sing 54 n n N6 H20 5FK sing 55 n n N21 H21 5FK sing 56 n n # _atom_sites.entry_id 5DU8 _atom_sites.fract_transf_matrix[1][1] 0.019459 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008622 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005831 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 5FK A 1 301 1 5FK G72 . E 2 5FK B 1 301 1 5FK G72 . F 2 5FK C 1 301 1 5FK G72 . G 3 HOH A 1 401 141 HOH HOH . G 3 HOH A 2 402 65 HOH HOH . G 3 HOH A 3 403 71 HOH HOH . G 3 HOH A 4 404 43 HOH HOH . G 3 HOH A 5 405 34 HOH HOH . G 3 HOH A 6 406 3 HOH HOH . G 3 HOH A 7 407 2 HOH HOH . G 3 HOH A 8 408 14 HOH HOH . G 3 HOH A 9 409 99 HOH HOH . G 3 HOH A 10 410 8 HOH HOH . G 3 HOH A 11 411 69 HOH HOH . G 3 HOH A 12 412 45 HOH HOH . G 3 HOH A 13 413 74 HOH HOH . G 3 HOH A 14 414 29 HOH HOH . G 3 HOH A 15 415 60 HOH HOH . G 3 HOH A 16 416 128 HOH HOH . G 3 HOH A 17 417 96 HOH HOH . G 3 HOH A 18 418 83 HOH HOH . G 3 HOH A 19 419 86 HOH HOH . G 3 HOH A 20 420 123 HOH HOH . G 3 HOH A 21 421 81 HOH HOH . G 3 HOH A 22 422 27 HOH HOH . G 3 HOH A 23 423 144 HOH HOH . G 3 HOH A 24 424 1 HOH HOH . G 3 HOH A 25 425 103 HOH HOH . G 3 HOH A 26 426 50 HOH HOH . G 3 HOH A 27 427 75 HOH HOH . G 3 HOH A 28 428 142 HOH HOH . G 3 HOH A 29 429 115 HOH HOH . G 3 HOH A 30 430 110 HOH HOH . G 3 HOH A 31 431 85 HOH HOH . G 3 HOH A 32 432 89 HOH HOH . G 3 HOH A 33 433 58 HOH HOH . G 3 HOH A 34 434 77 HOH HOH . G 3 HOH A 35 435 134 HOH HOH . G 3 HOH A 36 436 101 HOH HOH . G 3 HOH A 37 437 44 HOH HOH . G 3 HOH A 38 438 119 HOH HOH . G 3 HOH A 39 439 35 HOH HOH . G 3 HOH A 40 440 63 HOH HOH . G 3 HOH A 41 441 73 HOH HOH . G 3 HOH A 42 442 52 HOH HOH . G 3 HOH A 43 443 138 HOH HOH . G 3 HOH A 44 444 92 HOH HOH . G 3 HOH A 45 445 13 HOH HOH . G 3 HOH A 46 446 33 HOH HOH . G 3 HOH A 47 447 61 HOH HOH . G 3 HOH A 48 448 12 HOH HOH . G 3 HOH A 49 449 16 HOH HOH . G 3 HOH A 50 450 108 HOH HOH . G 3 HOH A 51 451 47 HOH HOH . G 3 HOH A 52 452 162 HOH HOH . G 3 HOH A 53 453 82 HOH HOH . G 3 HOH A 54 454 150 HOH HOH . G 3 HOH A 55 455 159 HOH HOH . G 3 HOH A 56 456 127 HOH HOH . G 3 HOH A 57 457 135 HOH HOH . G 3 HOH A 58 458 164 HOH HOH . G 3 HOH A 59 459 147 HOH HOH . G 3 HOH A 60 460 161 HOH HOH . G 3 HOH A 61 461 160 HOH HOH . G 3 HOH A 62 462 149 HOH HOH . G 3 HOH A 63 463 28 HOH HOH . G 3 HOH A 64 464 158 HOH HOH . G 3 HOH A 65 465 154 HOH HOH . G 3 HOH A 66 466 156 HOH HOH . H 3 HOH B 1 401 166 HOH HOH . H 3 HOH B 2 402 84 HOH HOH . H 3 HOH B 3 403 31 HOH HOH . H 3 HOH B 4 404 15 HOH HOH . H 3 HOH B 5 405 72 HOH HOH . H 3 HOH B 6 406 70 HOH HOH . H 3 HOH B 7 407 20 HOH HOH . H 3 HOH B 8 408 105 HOH HOH . H 3 HOH B 9 409 68 HOH HOH . H 3 HOH B 10 410 7 HOH HOH . H 3 HOH B 11 411 140 HOH HOH . H 3 HOH B 12 412 102 HOH HOH . H 3 HOH B 13 413 40 HOH HOH . H 3 HOH B 14 414 95 HOH HOH . H 3 HOH B 15 415 39 HOH HOH . H 3 HOH B 16 416 11 HOH HOH . H 3 HOH B 17 417 17 HOH HOH . H 3 HOH B 18 418 5 HOH HOH . H 3 HOH B 19 419 57 HOH HOH . H 3 HOH B 20 420 18 HOH HOH . H 3 HOH B 21 421 64 HOH HOH . H 3 HOH B 22 422 107 HOH HOH . H 3 HOH B 23 423 30 HOH HOH . H 3 HOH B 24 424 21 HOH HOH . H 3 HOH B 25 425 78 HOH HOH . H 3 HOH B 26 426 51 HOH HOH . H 3 HOH B 27 427 136 HOH HOH . H 3 HOH B 28 428 153 HOH HOH . H 3 HOH B 29 429 80 HOH HOH . H 3 HOH B 30 430 112 HOH HOH . H 3 HOH B 31 431 76 HOH HOH . H 3 HOH B 32 432 41 HOH HOH . H 3 HOH B 33 433 22 HOH HOH . H 3 HOH B 34 434 67 HOH HOH . H 3 HOH B 35 435 132 HOH HOH . H 3 HOH B 36 436 88 HOH HOH . H 3 HOH B 37 437 6 HOH HOH . H 3 HOH B 38 438 125 HOH HOH . H 3 HOH B 39 439 114 HOH HOH . H 3 HOH B 40 440 91 HOH HOH . H 3 HOH B 41 441 38 HOH HOH . H 3 HOH B 42 442 48 HOH HOH . H 3 HOH B 43 443 116 HOH HOH . H 3 HOH B 44 444 19 HOH HOH . H 3 HOH B 45 445 87 HOH HOH . H 3 HOH B 46 446 113 HOH HOH . H 3 HOH B 47 447 55 HOH HOH . H 3 HOH B 48 448 165 HOH HOH . H 3 HOH B 49 449 130 HOH HOH . H 3 HOH B 50 450 157 HOH HOH . H 3 HOH B 51 451 117 HOH HOH . H 3 HOH B 52 452 152 HOH HOH . H 3 HOH B 53 453 122 HOH HOH . H 3 HOH B 54 454 131 HOH HOH . I 3 HOH C 1 401 109 HOH HOH . I 3 HOH C 2 402 4 HOH HOH . I 3 HOH C 3 403 93 HOH HOH . I 3 HOH C 4 404 111 HOH HOH . I 3 HOH C 5 405 56 HOH HOH . I 3 HOH C 6 406 42 HOH HOH . I 3 HOH C 7 407 129 HOH HOH . I 3 HOH C 8 408 46 HOH HOH . I 3 HOH C 9 409 94 HOH HOH . I 3 HOH C 10 410 133 HOH HOH . I 3 HOH C 11 411 120 HOH HOH . I 3 HOH C 12 412 139 HOH HOH . I 3 HOH C 13 413 49 HOH HOH . I 3 HOH C 14 414 79 HOH HOH . I 3 HOH C 15 415 23 HOH HOH . I 3 HOH C 16 416 124 HOH HOH . I 3 HOH C 17 417 9 HOH HOH . I 3 HOH C 18 418 25 HOH HOH . I 3 HOH C 19 419 137 HOH HOH . I 3 HOH C 20 420 36 HOH HOH . I 3 HOH C 21 421 143 HOH HOH . I 3 HOH C 22 422 126 HOH HOH . I 3 HOH C 23 423 104 HOH HOH . I 3 HOH C 24 424 106 HOH HOH . I 3 HOH C 25 425 26 HOH HOH . I 3 HOH C 26 426 90 HOH HOH . I 3 HOH C 27 427 54 HOH HOH . I 3 HOH C 28 428 10 HOH HOH . I 3 HOH C 29 429 100 HOH HOH . I 3 HOH C 30 430 148 HOH HOH . I 3 HOH C 31 431 59 HOH HOH . I 3 HOH C 32 432 118 HOH HOH . I 3 HOH C 33 433 146 HOH HOH . I 3 HOH C 34 434 53 HOH HOH . I 3 HOH C 35 435 37 HOH HOH . I 3 HOH C 36 436 97 HOH HOH . I 3 HOH C 37 437 66 HOH HOH . I 3 HOH C 38 438 121 HOH HOH . I 3 HOH C 39 439 98 HOH HOH . I 3 HOH C 40 440 62 HOH HOH . I 3 HOH C 41 441 24 HOH HOH . I 3 HOH C 42 442 145 HOH HOH . I 3 HOH C 43 443 163 HOH HOH . I 3 HOH C 44 444 151 HOH HOH . I 3 HOH C 45 445 32 HOH HOH . I 3 HOH C 46 446 155 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 5FK . . . F 2 -6.468 53.627 -38.685 1 28.52 ? C1 5FK 301 C 1 HETATM 2 C C2 5FK . . . F 2 -4.958 53.952 -38.592 1 30.19 ? C2 5FK 301 C 1 HETATM 3 C C3 5FK . . . F 2 -4.613 55.263 -37.875 1 32.78 ? C3 5FK 301 C 1 HETATM 4 C C5 5FK . . . F 2 -6.895 56.007 -38.676 1 31.09 ? C5 5FK 301 C 1 HETATM 5 C C7 5FK . . . F 2 -6.673 52.416 -39.546 1 27.53 ? C7 5FK 301 C 1 HETATM 6 C C8 5FK . . . F 2 -6.776 52.51 -40.944 1 28.48 ? C8 5FK 301 C 1 HETATM 7 C C9 5FK . . . F 2 -6.935 51.358 -41.737 1 28.15 ? C9 5FK 301 C 1 HETATM 8 C C10 5FK . . . F 2 -7.009 50.09 -41.131 1 27.55 ? C10 5FK 301 C 1 HETATM 9 C C11 5FK . . . F 2 -6.902 49.985 -39.734 1 27.34 ? C11 5FK 301 C 1 HETATM 10 C C12 5FK . . . F 2 -6.727 51.142 -38.958 1 27.22 ? C12 5FK 301 C 1 HETATM 11 C C13 5FK . . . F 2 -3.26 55.87 -38.28 1 35.78 ? C13 5FK 301 C 1 HETATM 12 C C17 5FK . . . F 2 -7.637 57.28 -38.728 1 33.21 ? C17 5FK 301 C 1 HETATM 13 C C18 5FK . . . F 2 -6.788 58.212 -38.134 1 32.52 ? C18 5FK 301 C 1 HETATM 14 C C20 5FK . . . F 2 -9.02 57.412 -39.26 1 35.71 ? C20 5FK 301 C 1 HETATM 15 C C23 5FK . . . F 2 -10.947 58.932 -39.568 1 45.23 ? C23 5FK 301 C 1 HETATM 16 C C24 5FK . . . F 2 -11.517 59.426 -38.251 1 49.9 ? C24 5FK 301 C 1 HETATM 17 C C25 5FK . . . F 2 -12.182 60.65 -38.154 1 51.78 ? C25 5FK 301 C 1 HETATM 18 C C26 5FK . . . F 2 -12.667 61.052 -36.908 1 53.49 ? C26 5FK 301 C 1 HETATM 19 C C27 5FK . . . F 2 -12.463 60.235 -35.79 1 53.58 ? C27 5FK 301 C 1 HETATM 20 C C28 5FK . . . F 2 -11.779 59.028 -35.922 1 53.52 ? C28 5FK 301 C 1 HETATM 21 C C32 5FK . . . F 2 -7.193 48.853 -41.974 1 26.68 ? C32 5FK 301 C 1 HETATM 22 F F58 5FK . . . F 2 -2.283 54.958 -38.145 1 34.18 ? F58 5FK 301 C 1 HETATM 23 F F57 5FK . . . F 2 -3.304 56.339 -39.526 1 35.96 ? F57 5FK 301 C 1 HETATM 24 F F56 5FK . . . F 2 -3.012 56.9 -37.481 1 37.01 ? F56 5FK 301 C 1 HETATM 25 C C33 5FK . . . F 2 -8.596 48.846 -42.559 1 27.13 ? C33 5FK 301 C 1 HETATM 26 N N6 5FK . . . F 2 -7.255 54.778 -39.116 1 29.95 ? N6 5FK 301 C 1 HETATM 27 N N4 5FK . . . F 2 -5.723 56.212 -38.144 1 32.17 ? N4 5FK 301 C 1 HETATM 28 N N19 5FK . . . F 2 -5.62 57.576 -37.788 1 33.04 ? N19 5FK 301 C 1 HETATM 29 O O22 5FK . . . F 2 -9.576 56.447 -39.745 1 38.09 ? O22 5FK 301 C 1 HETATM 30 N N21 5FK . . . F 2 -9.592 58.6 -39.161 1 41.08 ? N21 5FK 301 C 1 HETATM 31 N N29 5FK . . . F 2 -11.33 58.662 -37.137 1 53.08 ? N29 5FK 301 C 1 HETATM 32 F F30 5FK . . . F 2 -12.925 60.606 -34.584 1 52.62 ? F30 5FK 301 C 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 32 #