data_5DUC # _model_server_result.job_id jWaiGAqNJ1xlhqF-lnbLKw _model_server_result.datetime_utc '2024-12-27 11:11:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5duc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":301}' # _entry.id 5DUC # _exptl.entry_id 5DUC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 472.46 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (5R,7S)-N-(1,3-benzodioxol-5-ylmethyl)-5-(4-ethylphenyl)-7-(trifluoromethyl)-4,5,6,7-tetrahydropyrazolo[1,5-a]pyrimidine-3-carboxamide _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5DUC _cell.length_a 51.34 _cell.length_b 119.23 _cell.length_c 171.62 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5DUC _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'C24 H23 F3 N4 O3' _chem_comp.formula_weight 472.46 _chem_comp.id G51 _chem_comp.mon_nstd_flag . _chem_comp.name (5R,7S)-N-(1,3-benzodioxol-5-ylmethyl)-5-(4-ethylphenyl)-7-(trifluoromethyl)-4,5,6,7-tetrahydropyrazolo[1,5-a]pyrimidine-3-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O40 C27 G51 sing 83 n n O40 C41 G51 sing 84 n n C28 C27 G51 doub 85 n y C28 C29 G51 sing 86 n y C27 C26 G51 sing 87 n y C41 O42 G51 sing 88 n n C29 C24 G51 doub 89 n y C26 O42 G51 sing 90 n n C26 C25 G51 doub 91 n y C24 C25 G51 sing 92 n y C24 C23 G51 sing 93 n n C23 N21 G51 sing 94 n n N21 C20 G51 sing 95 n n C20 O22 G51 doub 96 n n C20 C17 G51 sing 97 n n C18 C17 G51 sing 98 n y C18 N19 G51 doub 99 n y C17 C5 G51 doub 100 n y N19 N4 G51 sing 101 n y C5 N4 G51 sing 102 n y C5 N6 G51 sing 103 n n N4 C3 G51 sing 104 n n F57 C13 G51 sing 105 n n N6 C1 G51 sing 106 n n F58 C13 G51 sing 107 n n C13 C3 G51 sing 108 n n C13 F56 G51 sing 109 n n C3 C2 G51 sing 110 n n C1 C2 G51 sing 111 n n C1 C7 G51 sing 112 n n C12 C7 G51 doub 113 n y C12 C11 G51 sing 114 n y C7 C8 G51 sing 115 n y C11 C10 G51 doub 116 n y C8 C9 G51 doub 117 n y C10 C9 G51 sing 118 n y C10 C32 G51 sing 119 n n C33 C32 G51 sing 120 n n N21 H2 G51 sing 121 n n C23 H232 G51 sing 122 n n C23 H231 G51 sing 123 n n C29 H29 G51 sing 124 n n C28 H28 G51 sing 125 n n C41 H412 G51 sing 126 n n C41 H411 G51 sing 127 n n C25 H25 G51 sing 128 n n C18 H18 G51 sing 129 n n C3 H3 G51 sing 130 n n N6 HN6 G51 sing 131 n n C1 H1 G51 sing 132 n n C2 H22 G51 sing 133 n n C2 H21 G51 sing 134 n n C12 H12 G51 sing 135 n n C11 H11 G51 sing 136 n n C32 H322 G51 sing 137 n n C32 H321 G51 sing 138 n n C33 H332 G51 sing 139 n n C33 H331 G51 sing 140 n n C33 H333 G51 sing 141 n n C9 H9 G51 sing 142 n n C8 H8 G51 sing 143 n n # _atom_sites.entry_id 5DUC _atom_sites.fract_transf_matrix[1][1] 0.019478 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008387 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005827 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 G51 A 1 301 303 G51 G51 . E 2 G51 B 1 301 302 G51 G51 . F 2 G51 C 1 301 301 G51 G51 . G 3 HOH A 1 401 16 HOH HOH . G 3 HOH A 2 402 55 HOH HOH . G 3 HOH A 3 403 100 HOH HOH . G 3 HOH A 4 404 4 HOH HOH . G 3 HOH A 5 405 34 HOH HOH . G 3 HOH A 6 406 39 HOH HOH . G 3 HOH A 7 407 28 HOH HOH . G 3 HOH A 8 408 54 HOH HOH . G 3 HOH A 9 409 84 HOH HOH . G 3 HOH A 10 410 67 HOH HOH . G 3 HOH A 11 411 53 HOH HOH . G 3 HOH A 12 412 46 HOH HOH . G 3 HOH A 13 413 44 HOH HOH . G 3 HOH A 14 414 86 HOH HOH . G 3 HOH A 15 415 51 HOH HOH . G 3 HOH A 16 416 48 HOH HOH . G 3 HOH A 17 417 50 HOH HOH . G 3 HOH A 18 418 77 HOH HOH . G 3 HOH A 19 419 102 HOH HOH . G 3 HOH A 20 420 98 HOH HOH . G 3 HOH A 21 421 9 HOH HOH . G 3 HOH A 22 422 101 HOH HOH . G 3 HOH A 23 423 69 HOH HOH . G 3 HOH A 24 424 59 HOH HOH . G 3 HOH A 25 425 99 HOH HOH . G 3 HOH A 26 426 79 HOH HOH . G 3 HOH A 27 427 64 HOH HOH . G 3 HOH A 28 428 76 HOH HOH . G 3 HOH A 29 429 27 HOH HOH . G 3 HOH A 30 430 18 HOH HOH . G 3 HOH A 31 431 61 HOH HOH . G 3 HOH A 32 432 65 HOH HOH . G 3 HOH A 33 433 78 HOH HOH . H 3 HOH B 1 401 103 HOH HOH . H 3 HOH B 2 402 1 HOH HOH . H 3 HOH B 3 403 75 HOH HOH . H 3 HOH B 4 404 107 HOH HOH . H 3 HOH B 5 405 10 HOH HOH . H 3 HOH B 6 406 6 HOH HOH . H 3 HOH B 7 407 2 HOH HOH . H 3 HOH B 8 408 109 HOH HOH . H 3 HOH B 9 409 40 HOH HOH . H 3 HOH B 10 410 37 HOH HOH . H 3 HOH B 11 411 96 HOH HOH . H 3 HOH B 12 412 22 HOH HOH . H 3 HOH B 13 413 11 HOH HOH . H 3 HOH B 14 414 57 HOH HOH . H 3 HOH B 15 415 94 HOH HOH . H 3 HOH B 16 416 52 HOH HOH . H 3 HOH B 17 417 104 HOH HOH . H 3 HOH B 18 418 12 HOH HOH . H 3 HOH B 19 419 60 HOH HOH . H 3 HOH B 20 420 91 HOH HOH . H 3 HOH B 21 421 106 HOH HOH . H 3 HOH B 22 422 68 HOH HOH . H 3 HOH B 23 423 19 HOH HOH . H 3 HOH B 24 424 33 HOH HOH . H 3 HOH B 25 425 108 HOH HOH . H 3 HOH B 26 426 105 HOH HOH . H 3 HOH B 27 427 17 HOH HOH . H 3 HOH B 28 428 88 HOH HOH . H 3 HOH B 29 429 15 HOH HOH . H 3 HOH B 30 430 70 HOH HOH . H 3 HOH B 31 431 66 HOH HOH . H 3 HOH B 32 432 71 HOH HOH . H 3 HOH B 33 433 97 HOH HOH . H 3 HOH B 34 434 38 HOH HOH . H 3 HOH B 35 435 82 HOH HOH . H 3 HOH B 36 436 62 HOH HOH . H 3 HOH B 37 437 21 HOH HOH . H 3 HOH B 38 438 25 HOH HOH . H 3 HOH B 39 439 80 HOH HOH . I 3 HOH C 1 401 49 HOH HOH . I 3 HOH C 2 402 5 HOH HOH . I 3 HOH C 3 403 74 HOH HOH . I 3 HOH C 4 404 14 HOH HOH . I 3 HOH C 5 405 13 HOH HOH . I 3 HOH C 6 406 35 HOH HOH . I 3 HOH C 7 407 43 HOH HOH . I 3 HOH C 8 408 45 HOH HOH . I 3 HOH C 9 409 7 HOH HOH . I 3 HOH C 10 410 92 HOH HOH . I 3 HOH C 11 411 8 HOH HOH . I 3 HOH C 12 412 20 HOH HOH . I 3 HOH C 13 413 26 HOH HOH . I 3 HOH C 14 414 30 HOH HOH . I 3 HOH C 15 415 56 HOH HOH . I 3 HOH C 16 416 41 HOH HOH . I 3 HOH C 17 417 3 HOH HOH . I 3 HOH C 18 418 23 HOH HOH . I 3 HOH C 19 419 85 HOH HOH . I 3 HOH C 20 420 31 HOH HOH . I 3 HOH C 21 421 24 HOH HOH . I 3 HOH C 22 422 89 HOH HOH . I 3 HOH C 23 423 32 HOH HOH . I 3 HOH C 24 424 29 HOH HOH . I 3 HOH C 25 425 87 HOH HOH . I 3 HOH C 26 426 42 HOH HOH . I 3 HOH C 27 427 72 HOH HOH . I 3 HOH C 28 428 73 HOH HOH . I 3 HOH C 29 429 83 HOH HOH . I 3 HOH C 30 430 90 HOH HOH . I 3 HOH C 31 431 63 HOH HOH . I 3 HOH C 32 432 36 HOH HOH . I 3 HOH C 33 433 47 HOH HOH . I 3 HOH C 34 434 81 HOH HOH . I 3 HOH C 35 435 58 HOH HOH . I 3 HOH C 36 436 93 HOH HOH . I 3 HOH C 37 437 95 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O22 G51 . . . F 2 -16.411 3.856 -40.299 1 54.7 ? O22 G51 301 C 1 HETATM 2 C C20 G51 . . . F 2 -17.085 2.839 -40.168 1 54.7 ? C20 G51 301 C 1 HETATM 3 N N21 G51 . . . F 2 -16.598 1.654 -40.503 1 54.7 ? N21 G51 301 C 1 HETATM 4 C C23 G51 . . . F 2 -15.26 1.42 -41.02 1 54.7 ? C23 G51 301 C 1 HETATM 5 C C24 G51 . . . F 2 -14.584 0.629 -39.924 1 54.7 ? C24 G51 301 C 1 HETATM 6 C C29 G51 . . . F 2 -13.758 -0.474 -40.197 1 54.7 ? C29 G51 301 C 1 HETATM 7 C C28 G51 . . . F 2 -13.167 -1.188 -39.149 1 54.7 ? C28 G51 301 C 1 HETATM 8 C C27 G51 . . . F 2 -13.436 -0.756 -37.848 1 54.7 ? C27 G51 301 C 1 HETATM 9 O O40 G51 . . . F 2 -12.987 -1.254 -36.655 1 54.7 ? O40 G51 301 C 1 HETATM 10 C C41 G51 . . . F 2 -13.425 -0.365 -35.6 1 54.7 ? C41 G51 301 C 1 HETATM 11 O O42 G51 . . . F 2 -14.332 0.542 -36.246 1 54.7 ? O42 G51 301 C 1 HETATM 12 C C26 G51 . . . F 2 -14.24 0.321 -37.589 1 54.7 ? C26 G51 301 C 1 HETATM 13 C C25 G51 . . . F 2 -14.832 1.032 -38.611 1 54.7 ? C25 G51 301 C 1 HETATM 14 C C17 G51 . . . F 2 -18.469 2.914 -39.619 1 54.7 ? C17 G51 301 C 1 HETATM 15 C C18 G51 . . . F 2 -19.328 1.929 -39.122 1 54.7 ? C18 G51 301 C 1 HETATM 16 N N19 G51 . . . F 2 -20.496 2.523 -38.728 1 54.7 ? N19 G51 301 C 1 HETATM 17 N N4 G51 . . . F 2 -20.386 3.912 -38.972 1 54.7 ? N4 G51 301 C 1 HETATM 18 C C3 G51 . . . F 2 -21.5 4.829 -38.668 1 54.7 ? C3 G51 301 C 1 HETATM 19 C C13 G51 . . . F 2 -22.804 4.184 -39.124 1 54.7 ? C13 G51 301 C 1 HETATM 20 F F57 G51 . . . F 2 -22.94 2.986 -38.571 1 54.7 ? F57 G51 301 C 1 HETATM 21 F F56 G51 . . . F 2 -23.799 4.984 -38.757 1 54.7 ? F56 G51 301 C 1 HETATM 22 F F58 G51 . . . F 2 -22.791 3.999 -40.44 1 54.7 ? F58 G51 301 C 1 HETATM 23 C C5 G51 . . . F 2 -19.23 4.17 -39.51 1 54.7 ? C5 G51 301 C 1 HETATM 24 N N6 G51 . . . F 2 -18.867 5.442 -39.792 1 54.7 ? N6 G51 301 C 1 HETATM 25 C C1 G51 . . . F 2 -19.742 6.522 -39.352 1 54.7 ? C1 G51 301 C 1 HETATM 26 C C2 G51 . . . F 2 -21.221 6.134 -39.414 1 54.7 ? C2 G51 301 C 1 HETATM 27 C C7 G51 . . . F 2 -19.488 7.751 -40.138 1 54.7 ? C7 G51 301 C 1 HETATM 28 C C12 G51 . . . F 2 -19.229 7.704 -41.501 1 54.7 ? C12 G51 301 C 1 HETATM 29 C C11 G51 . . . F 2 -18.996 8.878 -42.208 1 54.7 ? C11 G51 301 C 1 HETATM 30 C C10 G51 . . . F 2 -19.027 10.101 -41.555 1 54.7 ? C10 G51 301 C 1 HETATM 31 C C32 G51 . . . F 2 -18.769 11.381 -42.314 1 54.7 ? C32 G51 301 C 1 HETATM 32 C C33 G51 . . . F 2 -17.559 11.216 -43.207 1 54.7 ? C33 G51 301 C 1 HETATM 33 C C9 G51 . . . F 2 -19.28 10.15 -40.192 1 54.7 ? C9 G51 301 C 1 HETATM 34 C C8 G51 . . . F 2 -19.515 8.976 -39.49 1 54.7 ? C8 G51 301 C 1 HETATM 35 H H232 G51 . . . F 2 -15.296 0.846 -41.949 1 27.83 ? H232 G51 301 C 1 HETATM 36 H H231 G51 . . . F 2 -14.74 2.364 -41.197 1 27.83 ? H231 G51 301 C 1 HETATM 37 H H29 G51 . . . F 2 -13.585 -0.778 -41.222 1 27.83 ? H29 G51 301 C 1 HETATM 38 H H28 G51 . . . F 2 -12.525 -2.04 -39.338 1 27.83 ? H28 G51 301 C 1 HETATM 39 H H412 G51 . . . F 2 -13.932 -0.923 -34.81 1 27.83 ? H412 G51 301 C 1 HETATM 40 H H411 G51 . . . F 2 -12.577 0.175 -35.173 1 27.83 ? H411 G51 301 C 1 HETATM 41 H H25 G51 . . . F 2 -15.47 1.882 -38.402 1 27.83 ? H25 G51 301 C 1 HETATM 42 H H18 G51 . . . F 2 -19.107 0.871 -39.06 1 27.83 ? H18 G51 301 C 1 HETATM 43 H H3 G51 . . . F 2 -21.549 5.029 -37.588 1 27.83 ? H3 G51 301 C 1 HETATM 44 H HN6 G51 . . . F 2 -17.981 5.658 -40.223 1 27.83 ? HN6 G51 301 C 1 HETATM 45 H H1 G51 . . . F 2 -19.504 6.729 -38.299 1 27.83 ? H1 G51 301 C 1 HETATM 46 H H22 G51 . . . F 2 -21.522 6.024 -40.458 1 27.83 ? H22 G51 301 C 1 HETATM 47 H H21 G51 . . . F 2 -21.823 6.934 -38.978 1 27.83 ? H21 G51 301 C 1 HETATM 48 H H12 G51 . . . F 2 -19.208 6.751 -42.015 1 27.83 ? H12 G51 301 C 1 HETATM 49 H H11 G51 . . . F 2 -18.794 8.837 -43.271 1 27.83 ? H11 G51 301 C 1 HETATM 50 H H322 G51 . . . F 2 -18.597 12.198 -41.61 1 27.83 ? H322 G51 301 C 1 HETATM 51 H H321 G51 . . . F 2 -19.641 11.633 -42.92 1 27.83 ? H321 G51 301 C 1 HETATM 52 H H332 G51 . . . F 2 -16.712 10.984 -42.614 1 27.83 ? H332 G51 301 C 1 HETATM 53 H H331 G51 . . . F 2 -17.734 10.431 -43.896 1 27.83 ? H331 G51 301 C 1 HETATM 54 H H333 G51 . . . F 2 -17.384 12.117 -43.735 1 27.83 ? H333 G51 301 C 1 HETATM 55 H H9 G51 . . . F 2 -19.303 11.103 -39.678 1 27.83 ? H9 G51 301 C 1 HETATM 56 H H8 G51 . . . F 2 -19.716 9.017 -38.426 1 27.83 ? H8 G51 301 C 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 56 #