data_5DXR
#
_model_server_result.job_id            UtnNX97ttE4XU0ly0JQF1A 
_model_server_result.datetime_utc      '2024-10-12 16:36:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5dxr 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":900}' 
#
_entry.id    5DXR 
#
_exptl.entry_id    5DXR 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              294.387 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "4,4'-{[(3R)-3-methylcyclohexylidene]methanediyl}diphenol" 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          110.71 
_cell.angle_gamma         90 
_cell.entry_id            5DXR 
_cell.length_a            54.961 
_cell.length_b            82.025 
_cell.length_c            58.778 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5DXR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 F N N 
#
_chem_comp.formula           'C20 H22 O2' 
_chem_comp.formula_weight    294.387 
_chem_comp.id                5HW 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "4,4'-{[(3R)-3-methylcyclohexylidene]methanediyl}diphenol" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O01 C02 5HW sing 1 n n 
C03 C02 5HW doub 2 n y 
C03 C04 5HW sing 3 n y 
C02 C22 5HW sing 4 n y 
C04 C05 5HW doub 5 n y 
C22 C21 5HW doub 6 n y 
C05 C21 5HW sing 7 n y 
C05 C06 5HW sing 8 n n 
C13 C12 5HW doub 9 n y 
C13 C07 5HW sing 10 n y 
C12 C10 5HW sing 11 n y 
C06 C07 5HW sing 12 n n 
C06 C14 5HW doub 13 n n 
C07 C08 5HW doub 14 n y 
C10 O11 5HW sing 15 n n 
C10 C09 5HW doub 16 n y 
C08 C09 5HW sing 17 n y 
C15 C14 5HW sing 18 n n 
C15 C16 5HW sing 19 n n 
C14 C20 5HW sing 20 n n 
C16 C17 5HW sing 21 n n 
C20 C18 5HW sing 22 n n 
C17 C18 5HW sing 23 n n 
C18 C19 5HW sing 24 n n 
O01 H1 5HW sing 25 n n 
C03 H2 5HW sing 26 n n 
C04 H3 5HW sing 27 n n 
C08 H5 5HW sing 28 n n 
C09 H6 5HW sing 29 n n 
O11 H7 5HW sing 30 n n 
C12 H8 5HW sing 31 n n 
C13 H9 5HW sing 32 n n 
C15 H11 5HW sing 33 n n 
C15 H12 5HW sing 34 n n 
C16 H13 5HW sing 35 n n 
C16 H14 5HW sing 36 n n 
C17 H15 5HW sing 37 n n 
C17 H16 5HW sing 38 n n 
C18 H17 5HW sing 39 n n 
C19 H18 5HW sing 40 n n 
C19 H19 5HW sing 41 n n 
C19 H20 5HW sing 42 n n 
C20 H21 5HW sing 43 n n 
C20 H22 5HW sing 44 n n 
C21 H23 5HW sing 45 n n 
C22 H24 5HW sing 46 n n 
#
_atom_sites.entry_id                     5DXR 
_atom_sites.fract_transf_matrix[1][1]    0.018195 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.006879 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012191 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018188 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 5HW A 1 900 900 5HW UNK . 
F 3 5HW B 1 901 901 5HW UNK . 
G 4 HOH A 1 1001 34 HOH HOH . 
G 4 HOH A 2 1002 96 HOH HOH . 
G 4 HOH A 3 1003 109 HOH HOH . 
G 4 HOH A 4 1004 113 HOH HOH . 
G 4 HOH A 5 1005 21 HOH HOH . 
G 4 HOH A 6 1006 53 HOH HOH . 
G 4 HOH A 7 1007 57 HOH HOH . 
G 4 HOH A 8 1008 102 HOH HOH . 
G 4 HOH A 9 1009 41 HOH HOH . 
G 4 HOH A 10 1010 25 HOH HOH . 
G 4 HOH A 11 1011 32 HOH HOH . 
G 4 HOH A 12 1012 82 HOH HOH . 
G 4 HOH A 13 1013 61 HOH HOH . 
G 4 HOH A 14 1014 50 HOH HOH . 
G 4 HOH A 15 1015 86 HOH HOH . 
G 4 HOH A 16 1016 59 HOH HOH . 
G 4 HOH A 17 1017 27 HOH HOH . 
G 4 HOH A 18 1018 11 HOH HOH . 
G 4 HOH A 19 1019 8 HOH HOH . 
G 4 HOH A 20 1020 87 HOH HOH . 
G 4 HOH A 21 1021 39 HOH HOH . 
G 4 HOH A 22 1022 12 HOH HOH . 
G 4 HOH A 23 1023 19 HOH HOH . 
G 4 HOH A 24 1024 114 HOH HOH . 
G 4 HOH A 25 1025 10 HOH HOH . 
G 4 HOH A 26 1026 38 HOH HOH . 
G 4 HOH A 27 1027 13 HOH HOH . 
G 4 HOH A 28 1028 22 HOH HOH . 
G 4 HOH A 29 1029 97 HOH HOH . 
G 4 HOH A 30 1030 17 HOH HOH . 
G 4 HOH A 31 1031 36 HOH HOH . 
G 4 HOH A 32 1032 26 HOH HOH . 
G 4 HOH A 33 1033 31 HOH HOH . 
G 4 HOH A 34 1034 104 HOH HOH . 
G 4 HOH A 35 1035 54 HOH HOH . 
G 4 HOH A 36 1036 24 HOH HOH . 
G 4 HOH A 37 1037 30 HOH HOH . 
G 4 HOH A 38 1038 73 HOH HOH . 
G 4 HOH A 39 1039 83 HOH HOH . 
G 4 HOH A 40 1040 49 HOH HOH . 
G 4 HOH A 41 1041 37 HOH HOH . 
G 4 HOH A 42 1042 48 HOH HOH . 
G 4 HOH A 43 1043 67 HOH HOH . 
G 4 HOH A 44 1044 63 HOH HOH . 
G 4 HOH A 45 1045 66 HOH HOH . 
G 4 HOH A 46 1046 47 HOH HOH . 
G 4 HOH A 47 1047 68 HOH HOH . 
G 4 HOH A 48 1048 108 HOH HOH . 
G 4 HOH A 49 1049 115 HOH HOH . 
G 4 HOH A 50 1050 93 HOH HOH . 
G 4 HOH A 51 1051 44 HOH HOH . 
H 4 HOH B 1 1001 58 HOH HOH . 
H 4 HOH B 2 1002 81 HOH HOH . 
H 4 HOH B 3 1003 9 HOH HOH . 
H 4 HOH B 4 1004 118 HOH HOH . 
H 4 HOH B 5 1005 95 HOH HOH . 
H 4 HOH B 6 1006 14 HOH HOH . 
H 4 HOH B 7 1007 107 HOH HOH . 
H 4 HOH B 8 1008 72 HOH HOH . 
H 4 HOH B 9 1009 91 HOH HOH . 
H 4 HOH B 10 1010 112 HOH HOH . 
H 4 HOH B 11 1011 3 HOH HOH . 
H 4 HOH B 12 1012 88 HOH HOH . 
H 4 HOH B 13 1013 70 HOH HOH . 
H 4 HOH B 14 1014 2 HOH HOH . 
H 4 HOH B 15 1015 33 HOH HOH . 
H 4 HOH B 16 1016 89 HOH HOH . 
H 4 HOH B 17 1017 20 HOH HOH . 
H 4 HOH B 18 1018 5 HOH HOH . 
H 4 HOH B 19 1019 43 HOH HOH . 
H 4 HOH B 20 1020 71 HOH HOH . 
H 4 HOH B 21 1021 92 HOH HOH . 
H 4 HOH B 22 1022 15 HOH HOH . 
H 4 HOH B 23 1023 69 HOH HOH . 
H 4 HOH B 24 1024 16 HOH HOH . 
H 4 HOH B 25 1025 55 HOH HOH . 
H 4 HOH B 26 1026 35 HOH HOH . 
H 4 HOH B 27 1027 103 HOH HOH . 
H 4 HOH B 28 1028 46 HOH HOH . 
H 4 HOH B 29 1029 29 HOH HOH . 
H 4 HOH B 30 1030 7 HOH HOH . 
H 4 HOH B 31 1031 111 HOH HOH . 
H 4 HOH B 32 1032 64 HOH HOH . 
H 4 HOH B 33 1033 94 HOH HOH . 
H 4 HOH B 34 1034 51 HOH HOH . 
H 4 HOH B 35 1035 56 HOH HOH . 
H 4 HOH B 36 1036 75 HOH HOH . 
H 4 HOH B 37 1037 18 HOH HOH . 
H 4 HOH B 38 1038 42 HOH HOH . 
H 4 HOH B 39 1039 4 HOH HOH . 
H 4 HOH B 40 1040 101 HOH HOH . 
H 4 HOH B 41 1041 40 HOH HOH . 
H 4 HOH B 42 1042 110 HOH HOH . 
H 4 HOH B 43 1043 62 HOH HOH . 
H 4 HOH B 44 1044 1 HOH HOH . 
H 4 HOH B 45 1045 65 HOH HOH . 
H 4 HOH B 46 1046 52 HOH HOH . 
H 4 HOH B 47 1047 78 HOH HOH . 
H 4 HOH B 48 1048 79 HOH HOH . 
H 4 HOH B 49 1049 60 HOH HOH . 
H 4 HOH B 50 1050 106 HOH HOH . 
H 4 HOH B 51 1051 74 HOH HOH . 
H 4 HOH B 52 1052 100 HOH HOH . 
H 4 HOH B 53 1053 84 HOH HOH . 
H 4 HOH B 54 1054 76 HOH HOH . 
H 4 HOH B 55 1055 6 HOH HOH . 
H 4 HOH B 56 1056 98 HOH HOH . 
H 4 HOH B 57 1057 85 HOH HOH . 
H 4 HOH B 58 1058 105 HOH HOH . 
H 4 HOH B 59 1059 116 HOH HOH . 
H 4 HOH B 60 1060 77 HOH HOH . 
H 4 HOH B 61 1061 99 HOH HOH . 
H 4 HOH B 62 1062 90 HOH HOH . 
H 4 HOH B 63 1063 23 HOH HOH . 
H 4 HOH B 64 1064 28 HOH HOH . 
I 4 HOH C 1 701 117 HOH HOH . 
I 4 HOH C 2 702 45 HOH HOH . 
J 4 HOH D 1 701 80 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O01 5HW . . . E 3 16.585 -0.523 0.184 1 35.49 ? O01 5HW 900 A 1 
HETATM 2 C C02 5HW . . . E 3 17.319 -0.925 1.328 1 33.21 ? C02 5HW 900 A 1 
HETATM 3 C C03 5HW . . . E 3 18.632 -1.363 1.196 1 31.73 ? C03 5HW 900 A 1 
HETATM 4 C C04 5HW . . . E 3 19.36 -1.76 2.328 1 31.79 ? C04 5HW 900 A 1 
HETATM 5 C C05 5HW . . . E 3 18.769 -1.723 3.597 1 32.01 ? C05 5HW 900 A 1 
HETATM 6 C C06 5HW . . . E 3 19.605 -2.165 4.835 1 42.57 ? C06 5HW 900 A 1 
HETATM 7 C C07 5HW . . . E 3 21.071 -1.675 4.942 1 41.45 ? C07 5HW 900 A 1 
HETATM 8 C C08 5HW . . . E 3 21.341 -0.352 5.251 1 40.9 ? C08 5HW 900 A 1 
HETATM 9 C C09 5HW . . . E 3 22.661 0.086 5.347 1 41.17 ? C09 5HW 900 A 1 
HETATM 10 C C10 5HW . . . E 3 23.707 -0.804 5.133 1 42.32 ? C10 5HW 900 A 1 
HETATM 11 O O11 5HW . . . E 3 25.042 -0.367 5.23 1 44.1 ? O11 5HW 900 A 1 
HETATM 12 C C12 5HW . . . E 3 23.44 -2.129 4.823 1 41.89 ? C12 5HW 900 A 1 
HETATM 13 C C13 5HW . . . E 3 22.125 -2.563 4.724 1 41.75 ? C13 5HW 900 A 1 
HETATM 14 C C14 5HW . . . E 3 19.163 -3.164 5.711 1 44.99 ? C14 5HW 900 A 1 
HETATM 15 C C15 5HW . . . E 3 17.923 -4.002 5.444 1 46.14 ? C15 5HW 900 A 1 
HETATM 16 C C16 5HW . . . E 3 17.506 -4.831 6.642 1 47.27 ? C16 5HW 900 A 1 
HETATM 17 C C17 5HW . . . E 3 17.583 -4.048 7.954 1 49.59 ? C17 5HW 900 A 1 
HETATM 18 C C18 5HW . . . E 3 18.969 -3.482 8.241 1 48.94 ? C18 5HW 900 A 1 
HETATM 19 C C19 5HW . . . E 3 19.644 -4.344 9.3 1 48.92 ? C19 5HW 900 A 1 
HETATM 20 C C20 5HW . . . E 3 19.88 -3.427 7.024 1 46.5 ? C20 5HW 900 A 1 
HETATM 21 C C21 5HW . . . E 3 17.457 -1.274 3.725 1 32.43 ? C21 5HW 900 A 1 
HETATM 22 C C22 5HW . . . E 3 16.724 -0.882 2.591 1 33.73 ? C22 5HW 900 A 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           300 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           22 
#