data_5DY7 # _model_server_result.job_id ui5VRtSZArTxw6fZr9hNyA _model_server_result.datetime_utc '2024-11-05 16:21:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5dy7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":801}' # _entry.id 5DY7 # _exptl.entry_id 5DY7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 216.16 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 7-(trifluoromethyl)-3,4-dihydroquinoxalin-2(1H)-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5DY7 _cell.length_a 60.667 _cell.length_b 60.667 _cell.length_c 62.382 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5DY7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C9 H7 F3 N2 O' _chem_comp.formula_weight 216.16 _chem_comp.id 5GT _chem_comp.mon_nstd_flag . _chem_comp.name 7-(trifluoromethyl)-3,4-dihydroquinoxalin-2(1H)-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O C 5GT doub 1 n n C CA 5GT sing 2 n n C NAJ 5GT sing 3 n n CA N 5GT sing 4 n n NAJ CAN 5GT sing 5 n n N CAM 5GT sing 6 n n CAN CAM 5GT doub 7 n y CAN CAG 5GT sing 8 n y CAM CAF 5GT sing 9 n y CAG CAL 5GT doub 10 n y CAF CAE 5GT doub 11 n y CAL CAE 5GT sing 12 n y CAL CAO 5GT sing 13 n n FAC CAO 5GT sing 14 n n FAD CAO 5GT sing 15 n n CAO FAB 5GT sing 16 n n CAG H1 5GT sing 17 n n NAJ H2 5GT sing 18 n n CA H3 5GT sing 19 n n CA H4 5GT sing 20 n n N H5 5GT sing 21 n n CAF H6 5GT sing 22 n n CAE H7 5GT sing 23 n n # _atom_sites.entry_id 5DY7 _atom_sites.fract_transf_matrix[1][1] 0.016483 _atom_sites.fract_transf_matrix[1][2] 0.009517 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019033 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01603 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 5GT A 1 801 1 5GT DRG . C 3 NO3 A 1 802 1 NO3 NO3 . D 4 HOH A 1 901 29 HOH HOH . D 4 HOH A 2 902 92 HOH HOH . D 4 HOH A 3 903 80 HOH HOH . D 4 HOH A 4 904 143 HOH HOH . D 4 HOH A 5 905 87 HOH HOH . D 4 HOH A 6 906 61 HOH HOH . D 4 HOH A 7 907 146 HOH HOH . D 4 HOH A 8 908 34 HOH HOH . D 4 HOH A 9 909 117 HOH HOH . D 4 HOH A 10 910 53 HOH HOH . D 4 HOH A 11 911 48 HOH HOH . D 4 HOH A 12 912 91 HOH HOH . D 4 HOH A 13 913 31 HOH HOH . D 4 HOH A 14 914 18 HOH HOH . D 4 HOH A 15 915 84 HOH HOH . D 4 HOH A 16 916 119 HOH HOH . D 4 HOH A 17 917 3 HOH HOH . D 4 HOH A 18 918 41 HOH HOH . D 4 HOH A 19 919 51 HOH HOH . D 4 HOH A 20 920 97 HOH HOH . D 4 HOH A 21 921 11 HOH HOH . D 4 HOH A 22 922 88 HOH HOH . D 4 HOH A 23 923 94 HOH HOH . D 4 HOH A 24 924 1 HOH HOH . D 4 HOH A 25 925 5 HOH HOH . D 4 HOH A 26 926 2 HOH HOH . D 4 HOH A 27 927 153 HOH HOH . D 4 HOH A 28 928 110 HOH HOH . D 4 HOH A 29 929 50 HOH HOH . D 4 HOH A 30 930 60 HOH HOH . D 4 HOH A 31 931 108 HOH HOH . D 4 HOH A 32 932 105 HOH HOH . D 4 HOH A 33 933 107 HOH HOH . D 4 HOH A 34 934 21 HOH HOH . D 4 HOH A 35 935 112 HOH HOH . D 4 HOH A 36 936 59 HOH HOH . D 4 HOH A 37 937 72 HOH HOH . D 4 HOH A 38 938 123 HOH HOH . D 4 HOH A 39 939 96 HOH HOH . D 4 HOH A 40 940 71 HOH HOH . D 4 HOH A 41 941 134 HOH HOH . D 4 HOH A 42 942 8 HOH HOH . D 4 HOH A 43 943 43 HOH HOH . D 4 HOH A 44 944 55 HOH HOH . D 4 HOH A 45 945 47 HOH HOH . D 4 HOH A 46 946 14 HOH HOH . D 4 HOH A 47 947 101 HOH HOH . D 4 HOH A 48 948 33 HOH HOH . D 4 HOH A 49 949 67 HOH HOH . D 4 HOH A 50 950 16 HOH HOH . D 4 HOH A 51 951 160 HOH HOH . D 4 HOH A 52 952 52 HOH HOH . D 4 HOH A 53 953 42 HOH HOH . D 4 HOH A 54 954 25 HOH HOH . D 4 HOH A 55 955 9 HOH HOH . D 4 HOH A 56 956 44 HOH HOH . D 4 HOH A 57 957 75 HOH HOH . D 4 HOH A 58 958 49 HOH HOH . D 4 HOH A 59 959 15 HOH HOH . D 4 HOH A 60 960 45 HOH HOH . D 4 HOH A 61 961 36 HOH HOH . D 4 HOH A 62 962 82 HOH HOH . D 4 HOH A 63 963 19 HOH HOH . D 4 HOH A 64 964 24 HOH HOH . D 4 HOH A 65 965 118 HOH HOH . D 4 HOH A 66 966 7 HOH HOH . D 4 HOH A 67 967 125 HOH HOH . D 4 HOH A 68 968 89 HOH HOH . D 4 HOH A 69 969 12 HOH HOH . D 4 HOH A 70 970 115 HOH HOH . D 4 HOH A 71 971 4 HOH HOH . D 4 HOH A 72 972 23 HOH HOH . D 4 HOH A 73 973 54 HOH HOH . D 4 HOH A 74 974 30 HOH HOH . D 4 HOH A 75 975 22 HOH HOH . D 4 HOH A 76 976 56 HOH HOH . D 4 HOH A 77 977 17 HOH HOH . D 4 HOH A 78 978 113 HOH HOH . D 4 HOH A 79 979 86 HOH HOH . D 4 HOH A 80 980 77 HOH HOH . D 4 HOH A 81 981 6 HOH HOH . D 4 HOH A 82 982 46 HOH HOH . D 4 HOH A 83 983 10 HOH HOH . D 4 HOH A 84 984 37 HOH HOH . D 4 HOH A 85 985 39 HOH HOH . D 4 HOH A 86 986 102 HOH HOH . D 4 HOH A 87 987 74 HOH HOH . D 4 HOH A 88 988 140 HOH HOH . D 4 HOH A 89 989 132 HOH HOH . D 4 HOH A 90 990 32 HOH HOH . D 4 HOH A 91 991 129 HOH HOH . D 4 HOH A 92 992 154 HOH HOH . D 4 HOH A 93 993 20 HOH HOH . D 4 HOH A 94 994 57 HOH HOH . D 4 HOH A 95 995 128 HOH HOH . D 4 HOH A 96 996 142 HOH HOH . D 4 HOH A 97 997 95 HOH HOH . D 4 HOH A 98 998 148 HOH HOH . D 4 HOH A 99 999 114 HOH HOH . D 4 HOH A 100 1000 104 HOH HOH . D 4 HOH A 101 1001 100 HOH HOH . D 4 HOH A 102 1002 135 HOH HOH . D 4 HOH A 103 1003 64 HOH HOH . D 4 HOH A 104 1004 68 HOH HOH . D 4 HOH A 105 1005 90 HOH HOH . D 4 HOH A 106 1006 138 HOH HOH . D 4 HOH A 107 1007 66 HOH HOH . D 4 HOH A 108 1008 126 HOH HOH . D 4 HOH A 109 1009 28 HOH HOH . D 4 HOH A 110 1010 116 HOH HOH . D 4 HOH A 111 1011 157 HOH HOH . D 4 HOH A 112 1012 124 HOH HOH . D 4 HOH A 113 1013 131 HOH HOH . D 4 HOH A 114 1014 85 HOH HOH . D 4 HOH A 115 1015 38 HOH HOH . D 4 HOH A 116 1016 137 HOH HOH . D 4 HOH A 117 1017 145 HOH HOH . D 4 HOH A 118 1018 27 HOH HOH . D 4 HOH A 119 1019 120 HOH HOH . D 4 HOH A 120 1020 13 HOH HOH . D 4 HOH A 121 1021 78 HOH HOH . D 4 HOH A 122 1022 63 HOH HOH . D 4 HOH A 123 1023 130 HOH HOH . D 4 HOH A 124 1024 26 HOH HOH . D 4 HOH A 125 1025 70 HOH HOH . D 4 HOH A 126 1026 73 HOH HOH . D 4 HOH A 127 1027 76 HOH HOH . D 4 HOH A 128 1028 147 HOH HOH . D 4 HOH A 129 1029 93 HOH HOH . D 4 HOH A 130 1030 152 HOH HOH . D 4 HOH A 131 1031 83 HOH HOH . D 4 HOH A 132 1032 58 HOH HOH . D 4 HOH A 133 1033 69 HOH HOH . D 4 HOH A 134 1034 35 HOH HOH . D 4 HOH A 135 1035 62 HOH HOH . D 4 HOH A 136 1036 103 HOH HOH . D 4 HOH A 137 1037 40 HOH HOH . D 4 HOH A 138 1038 111 HOH HOH . D 4 HOH A 139 1039 79 HOH HOH . D 4 HOH A 140 1040 98 HOH HOH . D 4 HOH A 141 1041 65 HOH HOH . D 4 HOH A 142 1042 106 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 F FAB 5GT . . . B 2 11.609 2.912 -1.526 1 58.02 ? FAB 5GT 801 A 1 HETATM 2 C CAO 5GT . . . B 2 11.28 2.835 -2.801 1 52.05 ? CAO 5GT 801 A 1 HETATM 3 F FAC 5GT . . . B 2 10.631 3.935 -3.141 1 53.26 ? FAC 5GT 801 A 1 HETATM 4 F FAD 5GT . . . B 2 10.504 1.799 -2.971 1 53.18 ? FAD 5GT 801 A 1 HETATM 5 C CAL 5GT . . . B 2 12.432 2.72 -3.589 1 43.19 ? CAL 5GT 801 A 1 HETATM 6 C CAG 5GT . . . B 2 12.423 2 -4.787 1 39.95 ? CAG 5GT 801 A 1 HETATM 7 C CAN 5GT . . . B 2 13.586 1.92 -5.551 1 35.57 ? CAN 5GT 801 A 1 HETATM 8 N NAJ 5GT . . . B 2 13.626 1.194 -6.755 1 31.3 ? NAJ 5GT 801 A 1 HETATM 9 C C 5GT . . . B 2 14.754 1.239 -7.583 1 28.93 ? C 5GT 801 A 1 HETATM 10 O O 5GT . . . B 2 14.773 0.558 -8.612 1 25.16 ? O 5GT 801 A 1 HETATM 11 C CA 5GT . . . B 2 15.842 2.067 -7.288 1 30.65 ? CA 5GT 801 A 1 HETATM 12 N N 5GT . . . B 2 15.919 2.456 -5.866 1 30.77 ? N 5GT 801 A 1 HETATM 13 C CAM 5GT . . . B 2 14.749 2.538 -5.101 1 33.19 ? CAM 5GT 801 A 1 HETATM 14 C CAF 5GT . . . B 2 14.757 3.256 -3.91 1 33.48 ? CAF 5GT 801 A 1 HETATM 15 C CAE 5GT . . . B 2 13.596 3.347 -3.156 1 38.07 ? CAE 5GT 801 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 334 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 15 #