data_5DZ0
#
_model_server_result.job_id            pw71pkmelFMbnkVjritlUw 
_model_server_result.datetime_utc      '2024-10-12 16:31:18' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5dz0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":900}' 
#
_entry.id    5DZ0 
#
_exptl.entry_id    5DZ0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              294.387 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "4,4'-[(4-methylcyclohexylidene)methanediyl]diphenol" 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          109.98 
_cell.angle_gamma         90 
_cell.entry_id            5DZ0 
_cell.length_a            54.084 
_cell.length_b            81 
_cell.length_c            58.005 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5DZ0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 F N N 
#
_chem_comp.formula           'C20 H22 O2' 
_chem_comp.formula_weight    294.387 
_chem_comp.id                5K0 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "4,4'-[(4-methylcyclohexylidene)methanediyl]diphenol" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O01 C02 5K0 sing 1 n n 
C22 C02 5K0 doub 2 n y 
C22 C21 5K0 sing 3 n y 
C02 C03 5K0 sing 4 n y 
C21 C05 5K0 doub 5 n y 
C03 C04 5K0 doub 6 n y 
C05 C04 5K0 sing 7 n y 
C05 C06 5K0 sing 8 n n 
C06 C07 5K0 sing 9 n n 
C06 C14 5K0 doub 10 n n 
C13 C07 5K0 doub 11 n y 
C13 C12 5K0 sing 12 n y 
C07 C08 5K0 sing 13 n y 
C12 C10 5K0 doub 14 n y 
C08 C09 5K0 doub 15 n y 
C10 C09 5K0 sing 16 n y 
C10 O11 5K0 sing 17 n n 
C15 C14 5K0 sing 18 n n 
C15 C16 5K0 sing 19 n n 
C14 C20 5K0 sing 20 n n 
C16 C17 5K0 sing 21 n n 
C20 C19 5K0 sing 22 n n 
C17 C19 5K0 sing 23 n n 
C17 C18 5K0 sing 24 n n 
O01 H1 5K0 sing 25 n n 
C03 H2 5K0 sing 26 n n 
C04 H3 5K0 sing 27 n n 
C08 H5 5K0 sing 28 n n 
C09 H6 5K0 sing 29 n n 
O11 H7 5K0 sing 30 n n 
C12 H8 5K0 sing 31 n n 
C13 H9 5K0 sing 32 n n 
C15 H11 5K0 sing 33 n n 
C15 H12 5K0 sing 34 n n 
C16 H13 5K0 sing 35 n n 
C16 H14 5K0 sing 36 n n 
C17 H15 5K0 sing 37 n n 
C18 H16 5K0 sing 38 n n 
C18 H17 5K0 sing 39 n n 
C18 H18 5K0 sing 40 n n 
C19 H19 5K0 sing 41 n n 
C19 H20 5K0 sing 42 n n 
C20 H21 5K0 sing 43 n n 
C20 H22 5K0 sing 44 n n 
C21 H23 5K0 sing 45 n n 
C22 H24 5K0 sing 46 n n 
#
_atom_sites.entry_id                     5DZ0 
_atom_sites.fract_transf_matrix[1][1]    0.01849 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.006722 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012346 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018344 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 5K0 A 1 900 900 5K0 5K0 . 
F 3 5K0 B 1 901 901 5K0 5K0 . 
G 4 HOH A 1 1001 1006 HOH HOH . 
G 4 HOH A 2 1002 1002 HOH HOH . 
G 4 HOH A 3 1003 1003 HOH HOH . 
G 4 HOH A 4 1004 1005 HOH HOH . 
G 4 HOH A 5 1005 1007 HOH HOH . 
G 4 HOH A 6 1006 1004 HOH HOH . 
G 4 HOH A 7 1007 1010 HOH HOH . 
G 4 HOH A 8 1008 1012 HOH HOH . 
G 4 HOH A 9 1009 1008 HOH HOH . 
G 4 HOH A 10 1010 1013 HOH HOH . 
G 4 HOH A 11 1011 1011 HOH HOH . 
G 4 HOH A 12 1012 1023 HOH HOH . 
G 4 HOH A 13 1013 1009 HOH HOH . 
G 4 HOH A 14 1014 1014 HOH HOH . 
G 4 HOH A 15 1015 1022 HOH HOH . 
G 4 HOH A 16 1016 1018 HOH HOH . 
G 4 HOH A 17 1017 1015 HOH HOH . 
G 4 HOH A 18 1018 1019 HOH HOH . 
G 4 HOH A 19 1019 1017 HOH HOH . 
G 4 HOH A 20 1020 1028 HOH HOH . 
G 4 HOH A 21 1021 1020 HOH HOH . 
G 4 HOH A 22 1022 1025 HOH HOH . 
G 4 HOH A 23 1023 1016 HOH HOH . 
G 4 HOH A 24 1024 1026 HOH HOH . 
G 4 HOH A 25 1025 1021 HOH HOH . 
G 4 HOH A 26 1026 1029 HOH HOH . 
G 4 HOH A 27 1027 1027 HOH HOH . 
G 4 HOH A 28 1028 1030 HOH HOH . 
G 4 HOH A 29 1029 1031 HOH HOH . 
G 4 HOH A 30 1030 1024 HOH HOH . 
G 4 HOH A 31 1031 1035 HOH HOH . 
G 4 HOH A 32 1032 1033 HOH HOH . 
G 4 HOH A 33 1033 1039 HOH HOH . 
G 4 HOH A 34 1034 1037 HOH HOH . 
G 4 HOH A 35 1035 1036 HOH HOH . 
G 4 HOH A 36 1036 1032 HOH HOH . 
G 4 HOH A 37 1037 1042 HOH HOH . 
G 4 HOH A 38 1038 1034 HOH HOH . 
G 4 HOH A 39 1039 1040 HOH HOH . 
G 4 HOH A 40 1040 1038 HOH HOH . 
G 4 HOH A 41 1041 1043 HOH HOH . 
G 4 HOH A 42 1042 1044 HOH HOH . 
G 4 HOH A 43 1043 1041 HOH HOH . 
G 4 HOH A 44 1044 1047 HOH HOH . 
G 4 HOH A 45 1045 1045 HOH HOH . 
G 4 HOH A 46 1046 1053 HOH HOH . 
G 4 HOH A 47 1047 1046 HOH HOH . 
G 4 HOH A 48 1048 1050 HOH HOH . 
G 4 HOH A 49 1049 1048 HOH HOH . 
G 4 HOH A 50 1050 1049 HOH HOH . 
G 4 HOH A 51 1051 1051 HOH HOH . 
G 4 HOH A 52 1052 1054 HOH HOH . 
G 4 HOH A 53 1053 1052 HOH HOH . 
G 4 HOH A 54 1054 1055 HOH HOH . 
G 4 HOH A 55 1055 1056 HOH HOH . 
G 4 HOH A 56 1056 1057 HOH HOH . 
G 4 HOH A 57 1057 1058 HOH HOH . 
G 4 HOH A 58 1058 1059 HOH HOH . 
G 4 HOH A 59 1059 1060 HOH HOH . 
G 4 HOH A 60 1060 1061 HOH HOH . 
H 4 HOH B 1 1001 1004 HOH HOH . 
H 4 HOH B 2 1002 1001 HOH HOH . 
H 4 HOH B 3 1003 1001 HOH HOH . 
H 4 HOH B 4 1004 1007 HOH HOH . 
H 4 HOH B 5 1005 1006 HOH HOH . 
H 4 HOH B 6 1006 1002 HOH HOH . 
H 4 HOH B 7 1007 1008 HOH HOH . 
H 4 HOH B 8 1008 1003 HOH HOH . 
H 4 HOH B 9 1009 1005 HOH HOH . 
H 4 HOH B 10 1010 1014 HOH HOH . 
H 4 HOH B 11 1011 1011 HOH HOH . 
H 4 HOH B 12 1012 1010 HOH HOH . 
H 4 HOH B 13 1013 1009 HOH HOH . 
H 4 HOH B 14 1014 1012 HOH HOH . 
H 4 HOH B 15 1015 1013 HOH HOH . 
H 4 HOH B 16 1016 1015 HOH HOH . 
H 4 HOH B 17 1017 1018 HOH HOH . 
H 4 HOH B 18 1018 1017 HOH HOH . 
H 4 HOH B 19 1019 1020 HOH HOH . 
H 4 HOH B 20 1020 1024 HOH HOH . 
H 4 HOH B 21 1021 1021 HOH HOH . 
H 4 HOH B 22 1022 1026 HOH HOH . 
H 4 HOH B 23 1023 1022 HOH HOH . 
H 4 HOH B 24 1024 1019 HOH HOH . 
H 4 HOH B 25 1025 1025 HOH HOH . 
H 4 HOH B 26 1026 1016 HOH HOH . 
H 4 HOH B 27 1027 1023 HOH HOH . 
H 4 HOH B 28 1028 1027 HOH HOH . 
H 4 HOH B 29 1029 1031 HOH HOH . 
H 4 HOH B 30 1030 1030 HOH HOH . 
H 4 HOH B 31 1031 1029 HOH HOH . 
H 4 HOH B 32 1032 1028 HOH HOH . 
H 4 HOH B 33 1033 1035 HOH HOH . 
H 4 HOH B 34 1034 1038 HOH HOH . 
H 4 HOH B 35 1035 1034 HOH HOH . 
H 4 HOH B 36 1036 1036 HOH HOH . 
H 4 HOH B 37 1037 1032 HOH HOH . 
H 4 HOH B 38 1038 1033 HOH HOH . 
H 4 HOH B 39 1039 1040 HOH HOH . 
H 4 HOH B 40 1040 1037 HOH HOH . 
H 4 HOH B 41 1041 1039 HOH HOH . 
H 4 HOH B 42 1042 1041 HOH HOH . 
H 4 HOH B 43 1043 1043 HOH HOH . 
H 4 HOH B 44 1044 1042 HOH HOH . 
H 4 HOH B 45 1045 1044 HOH HOH . 
H 4 HOH B 46 1046 1046 HOH HOH . 
H 4 HOH B 47 1047 1045 HOH HOH . 
H 4 HOH B 48 1048 1048 HOH HOH . 
H 4 HOH B 49 1049 1047 HOH HOH . 
H 4 HOH B 50 1050 1050 HOH HOH . 
H 4 HOH B 51 1051 1049 HOH HOH . 
H 4 HOH B 52 1052 1051 HOH HOH . 
H 4 HOH B 53 1053 1052 HOH HOH . 
H 4 HOH B 54 1054 1053 HOH HOH . 
H 4 HOH B 55 1055 1054 HOH HOH . 
H 4 HOH B 56 1056 1055 HOH HOH . 
H 4 HOH B 57 1057 1056 HOH HOH . 
I 4 HOH C 1 701 701 HOH HOH . 
I 4 HOH C 2 702 702 HOH HOH . 
I 4 HOH C 3 703 703 HOH HOH . 
J 4 HOH D 1 701 701 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O01 5K0 . . . E 3 16.753 -0.347 0.123 1 32.42 ? O01 5K0 900 A 1 
HETATM 2 C C02 5K0 . . . E 3 17.407 -0.708 1.334 1 29.93 ? C02 5K0 900 A 1 
HETATM 3 C C03 5K0 . . . E 3 16.73 -0.641 2.539 1 28.84 ? C03 5K0 900 A 1 
HETATM 4 C C04 5K0 . . . E 3 17.383 -0.997 3.743 1 28.41 ? C04 5K0 900 A 1 
HETATM 5 C C05 5K0 . . . E 3 18.707 -1.435 3.746 1 27.97 ? C05 5K0 900 A 1 
HETATM 6 C C06 5K0 . . . E 3 19.481 -1.839 5.044 1 32.52 ? C06 5K0 900 A 1 
HETATM 7 C C07 5K0 . . . E 3 20.958 -1.384 5.07 1 32.83 ? C07 5K0 900 A 1 
HETATM 8 C C08 5K0 . . . E 3 21.258 -0.019 5.059 1 32.33 ? C08 5K0 900 A 1 
HETATM 9 C C09 5K0 . . . E 3 22.586 0.434 5.078 1 32.4 ? C09 5K0 900 A 1 
HETATM 10 C C10 5K0 . . . E 3 23.635 -0.491 5.104 1 33.79 ? C10 5K0 900 A 1 
HETATM 11 O O11 5K0 . . . E 3 24.989 -0.046 5.124 1 34.93 ? O11 5K0 900 A 1 
HETATM 12 C C12 5K0 . . . E 3 23.352 -1.856 5.111 1 33.49 ? C12 5K0 900 A 1 
HETATM 13 C C13 5K0 . . . E 3 22.021 -2.303 5.091 1 33.42 ? C13 5K0 900 A 1 
HETATM 14 C C14 5K0 . . . E 3 18.977 -2.694 6.074 1 33.99 ? C14 5K0 900 A 1 
HETATM 15 C C15 5K0 . . . E 3 17.622 -3.4 6.076 1 34.78 ? C15 5K0 900 A 1 
HETATM 16 C C16 5K0 . . . E 3 17.554 -4.62 6.992 1 34.93 ? C16 5K0 900 A 1 
HETATM 17 C C17 5K0 . . . E 3 18.882 -5.12 7.553 1 35.78 ? C17 5K0 900 A 1 
HETATM 18 C C18 5K0 . . . E 3 18.611 -5.992 8.798 1 36.56 ? C18 5K0 900 A 1 
HETATM 19 C C19 5K0 . . . E 3 19.913 -4.042 7.927 1 34.91 ? C19 5K0 900 A 1 
HETATM 20 C C20 5K0 . . . E 3 19.526 -2.644 7.475 1 34.84 ? C20 5K0 900 A 1 
HETATM 21 C C21 5K0 . . . E 3 19.363 -1.495 2.53 1 27.52 ? C21 5K0 900 A 1 
HETATM 22 C C22 5K0 . . . E 3 18.72 -1.135 1.325 1 28.35 ? C22 5K0 900 A 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           26 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           326 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           22 
#