data_5DZD
#
_model_server_result.job_id            CPheD8VvrWDULhTaMZEWDA 
_model_server_result.datetime_utc      '2024-12-22 11:43:29' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5dzd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":606}' 
#
_entry.id    5DZD 
#
_exptl.entry_id    5DZD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              ? 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'UNKNOWN ATOM OR ION' 
_entity.pdbx_number_of_molecules    17 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5DZD 
_cell.length_a            52.668 
_cell.length_b            52.668 
_cell.length_c            82.476 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5DZD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
? 3 M N N 
? 3 N N N 
? 3 O N N 
? 3 P N N 
? 3 Q N N 
? 3 R N N 
? 3 S N N 
? 3 T N N 
? 3 U N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 C SG CYS 8 C CYS 333 1_555 D SG CYS 8 D CYS 333 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.05 ? 
disulf ? disulf2 C SG CYS 8 C CYS 333 1_555 D SG CYS 8 D CYS 333 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.015 ? 
covale ? covale1 C C ACE 1 C ACE 326 1_555 C N THR 2 C THR 327 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.354 ? 
covale ? covale2 C C ILE 13 C ILE 338 1_555 C N NH2 14 C NH2 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale3 D C ILE 13 D ILE 338 1_555 D N NH2 14 D NH2 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.349 ? 
#
_chem_comp.formula           ? 
_chem_comp.formula_weight    ? 
_chem_comp.id                UNX 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'UNKNOWN ATOM OR ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5DZD 
_atom_sites.fract_transf_matrix[1][1]    0.018987 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018987 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012125 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 UNX A 1 601 45 UNX UNX . 
F 3 UNX A 1 602 48 UNX UNX . 
G 3 UNX A 1 603 81 UNX UNX . 
H 3 UNX A 1 604 2 UNX UNX . 
I 3 UNX A 1 605 5 UNX UNX . 
J 3 UNX A 1 606 6 UNX UNX . 
K 3 UNX A 1 607 8 UNX UNX . 
L 3 UNX B 1 601 77 UNX UNX . 
M 3 UNX B 1 602 80 UNX UNX . 
N 3 UNX B 1 603 90 UNX UNX . 
O 3 UNX B 1 604 1 UNX UNX . 
P 3 UNX B 1 605 3 UNX UNX . 
Q 3 UNX B 1 606 7 UNX UNX . 
R 3 UNX C 1 401 29 UNX UNX . 
S 3 UNX C 1 402 47 UNX UNX . 
T 3 UNX C 1 403 58 UNX UNX . 
U 3 UNX D 1 401 4 UNX UNX . 
V 4 HOH A 1 701 63 HOH HOH . 
V 4 HOH A 2 702 89 HOH HOH . 
V 4 HOH A 3 703 86 HOH HOH . 
V 4 HOH A 4 704 70 HOH HOH . 
V 4 HOH A 5 705 83 HOH HOH . 
V 4 HOH A 6 706 53 HOH HOH . 
V 4 HOH A 7 707 15 HOH HOH . 
V 4 HOH A 8 708 22 HOH HOH . 
V 4 HOH A 9 709 16 HOH HOH . 
V 4 HOH A 10 710 46 HOH HOH . 
V 4 HOH A 11 711 88 HOH HOH . 
V 4 HOH A 12 712 84 HOH HOH . 
V 4 HOH A 13 713 6 HOH HOH . 
V 4 HOH A 14 714 71 HOH HOH . 
V 4 HOH A 15 715 60 HOH HOH . 
V 4 HOH A 16 716 17 HOH HOH . 
V 4 HOH A 17 717 24 HOH HOH . 
V 4 HOH A 18 718 72 HOH HOH . 
V 4 HOH A 19 719 41 HOH HOH . 
V 4 HOH A 20 720 18 HOH HOH . 
V 4 HOH A 21 721 85 HOH HOH . 
V 4 HOH A 22 722 73 HOH HOH . 
W 4 HOH B 1 701 42 HOH HOH . 
W 4 HOH B 2 702 34 HOH HOH . 
W 4 HOH B 3 703 4 HOH HOH . 
W 4 HOH B 4 704 10 HOH HOH . 
W 4 HOH B 5 705 35 HOH HOH . 
W 4 HOH B 6 706 21 HOH HOH . 
W 4 HOH B 7 707 11 HOH HOH . 
W 4 HOH B 8 708 51 HOH HOH . 
W 4 HOH B 9 709 23 HOH HOH . 
W 4 HOH B 10 710 13 HOH HOH . 
W 4 HOH B 11 711 31 HOH HOH . 
W 4 HOH B 12 712 3 HOH HOH . 
W 4 HOH B 13 713 12 HOH HOH . 
W 4 HOH B 14 714 9 HOH HOH . 
W 4 HOH B 15 715 57 HOH HOH . 
W 4 HOH B 16 716 33 HOH HOH . 
W 4 HOH B 17 717 68 HOH HOH . 
W 4 HOH B 18 718 32 HOH HOH . 
W 4 HOH B 19 719 74 HOH HOH . 
W 4 HOH B 20 720 56 HOH HOH . 
W 4 HOH B 21 721 44 HOH HOH . 
W 4 HOH B 22 722 64 HOH HOH . 
X 4 HOH C 1 501 19 HOH HOH . 
X 4 HOH C 2 502 25 HOH HOH . 
X 4 HOH C 3 503 5 HOH HOH . 
X 4 HOH C 4 504 37 HOH HOH . 
X 4 HOH C 5 505 49 HOH HOH . 
X 4 HOH C 6 506 54 HOH HOH . 
X 4 HOH C 7 507 75 HOH HOH . 
X 4 HOH C 8 508 50 HOH HOH . 
X 4 HOH C 9 509 76 HOH HOH . 
X 4 HOH C 10 510 43 HOH HOH . 
Y 4 HOH D 1 501 90 HOH HOH . 
Y 4 HOH D 2 502 7 HOH HOH . 
Y 4 HOH D 3 503 26 HOH HOH . 
Y 4 HOH D 4 504 14 HOH HOH . 
Y 4 HOH D 5 505 62 HOH HOH . 
Y 4 HOH D 6 506 69 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           X 
_atom_site.label_atom_id         UNK 
_atom_site.label_comp_id         UNX 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         J 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               26.907 
_atom_site.Cartn_y               5.304 
_atom_site.Cartn_z               13.015 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        29.07 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          UNK 
_atom_site.auth_comp_id          UNX 
_atom_site.auth_seq_id           606 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    30 
_model_server_stats.query_time_ms           318 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#