data_5E0E # _model_server_result.job_id XC_NE-hmDX61W4hQ-uSX8g _model_server_result.datetime_utc '2024-11-28 03:01:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5e0e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":503}' # _entry.id 5E0E # _exptl.entry_id 5E0E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 178.618 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-(4-CHLOROPHENYL)IMIDAZOLE _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5E0E _cell.length_a 144.77 _cell.length_b 144.77 _cell.length_c 104.47 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5E0E _symmetry.cell_setting ? _symmetry.Int_Tables_number 80 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 41' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C TYR 172 A TYR 200 1_555 A CA LEU 173 A LEU 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.454 ? metalc ? metalc1 A SG CYS 408 A CYS 436 1_555 B FE HEM . A HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.954 ? # _chem_comp.formula 'C9 H7 Cl N2' _chem_comp.formula_weight 178.618 _chem_comp.id CPZ _chem_comp.mon_nstd_flag . _chem_comp.name 4-(4-CHLOROPHENYL)IMIDAZOLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C11 C10 CPZ doub 70 n y C11 C6 CPZ sing 71 n y C11 H11 CPZ sing 72 n n C10 C9 CPZ sing 73 n y C10 H10 CPZ sing 74 n n C9 C8 CPZ doub 75 n y C9 CL CPZ sing 76 n n C8 C7 CPZ sing 77 n y C8 H8 CPZ sing 78 n n C7 C6 CPZ doub 79 n y C7 H7 CPZ sing 80 n n C6 C4 CPZ sing 81 n y C4 C2 CPZ doub 82 n y C4 N3 CPZ sing 83 n y C2 N1 CPZ sing 84 n y C2 H2 CPZ sing 85 n n N1 C5 CPZ doub 86 n y C5 N3 CPZ sing 87 n y C5 H5 CPZ sing 88 n n N3 HN3 CPZ sing 89 n n # _atom_sites.entry_id 5E0E _atom_sites.fract_transf_matrix[1][1] 0.006908 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006908 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009572 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 501 494 HEM HEM . C 3 CPZ A 1 502 502 CPZ CPZ . D 3 CPZ A 1 503 503 CPZ CPZ . E 3 CPZ A 1 504 504 CPZ CPZ . F 4 HOH A 1 601 35 HOH HOH . F 4 HOH A 2 602 31 HOH HOH . F 4 HOH A 3 603 8 HOH HOH . F 4 HOH A 4 604 27 HOH HOH . F 4 HOH A 5 605 13 HOH HOH . F 4 HOH A 6 606 34 HOH HOH . F 4 HOH A 7 607 9 HOH HOH . F 4 HOH A 8 608 14 HOH HOH . F 4 HOH A 9 609 25 HOH HOH . F 4 HOH A 10 610 24 HOH HOH . F 4 HOH A 11 611 36 HOH HOH . F 4 HOH A 12 612 38 HOH HOH . F 4 HOH A 13 613 37 HOH HOH . F 4 HOH A 14 614 33 HOH HOH . F 4 HOH A 15 615 22 HOH HOH . F 4 HOH A 16 616 39 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C11 CPZ . . . D 3 9.464 11.477 19.328 1 106.58 ? C11 CPZ 503 A 1 HETATM 2 C C10 CPZ . . . D 3 8.658 11.403 20.455 1 104.26 ? C10 CPZ 503 A 1 HETATM 3 C C9 CPZ . . . D 3 7.862 12.482 20.811 1 102.07 ? C9 CPZ 503 A 1 HETATM 4 C C8 CPZ . . . D 3 7.873 13.635 20.04 1 102.65 ? C8 CPZ 503 A 1 HETATM 5 C C7 CPZ . . . D 3 8.679 13.71 18.914 1 105.45 ? C7 CPZ 503 A 1 HETATM 6 C C6 CPZ . . . D 3 9.474 12.63 18.558 1 108.26 ? C6 CPZ 503 A 1 HETATM 7 C C4 CPZ . . . D 3 10.341 12.71 17.347 1 111.67 ? C4 CPZ 503 A 1 HETATM 8 C C2 CPZ . . . D 3 10.296 13.669 16.345 1 112.79 ? C2 CPZ 503 A 1 HETATM 9 N N1 CPZ . . . D 3 11.225 13.424 15.414 1 113.25 ? N1 CPZ 503 A 1 HETATM 10 C C5 CPZ . . . D 3 11.846 12.315 15.835 1 113.93 ? C5 CPZ 503 A 1 HETATM 11 N N3 CPZ . . . D 3 11.335 11.863 16.996 1 113.54 ? N3 CPZ 503 A 1 HETATM 12 CL CL CPZ . . . D 3 6.858 12.389 22.214 1 95.65 ? CL CPZ 503 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 237 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 12 #