data_5E0Y # _model_server_result.job_id 6n9uJAeJe2FvePtCkIgIVA _model_server_result.datetime_utc '2024-10-10 08:20:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5e0y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":703}' # _entry.id 5E0Y # _exptl.entry_id 5E0Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5E0Y _cell.length_a 41.658 _cell.length_b 41.658 _cell.length_c 122.517 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5E0Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 19 A ASP 573 1_555 D ZN ZN . A ZN 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? metalc ? metalc2 A OE2 GLU 21 A GLU 575 1_555 C ZN ZN . A ZN 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? metalc ? metalc3 A OE1 GLU 21 A GLU 575 1_555 C ZN ZN . A ZN 702 10_666 ? ? ? ? ? ? ? ? ? ? ? ? 2.659 ? metalc ? metalc4 A OE2 GLU 21 A GLU 575 1_555 C ZN ZN . A ZN 702 10_666 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? metalc ? metalc5 A NZ LYS 35 A LYS 589 1_555 H ZN ZN . A ZN 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.528 ? metalc ? metalc6 A OD1 ASP 40 A ASP 594 1_555 E ZN ZN . A ZN 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc7 A OD2 ASP 40 A ASP 594 1_555 E ZN ZN . A ZN 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? metalc ? metalc8 A ND1 HIS 46 A HIS 600 1_555 B ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? metalc ? metalc9 A ND1 HIS 46 A HIS 600 1_555 B ZN ZN . A ZN 701 10_776 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? metalc ? metalc10 A OH TYR 51 A TYR 605 1_555 E ZN ZN . A ZN 704 8_676 ? B ? ? ? ? ? ? ? ? ? ? 1.998 ? metalc ? metalc11 A O GLN 72 A GLN 626 1_555 B ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.586 ? metalc ? metalc12 A OXT GLN 72 A GLN 626 1_555 B ZN ZN . A ZN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? metalc ? metalc13 A O GLN 72 A GLN 626 1_555 B ZN ZN . A ZN 701 10_776 ? ? ? ? ? ? ? ? ? ? ? ? 2.675 ? metalc ? metalc14 A OXT GLN 72 A GLN 626 1_555 B ZN ZN . A ZN 701 10_776 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? metalc ? metalc15 C ZN ZN . A ZN 702 1_555 J O HOH . A HOH 837 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? metalc ? metalc16 C ZN ZN . A ZN 702 1_555 J O HOH . A HOH 837 10_666 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? metalc ? metalc17 D ZN ZN . A ZN 703 1_555 J O HOH . A HOH 845 5_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? metalc ? metalc18 E ZN ZN . A ZN 704 1_555 J O HOH . A HOH 836 8_676 ? ? ? ? ? ? ? ? ? ? ? ? 2.444 ? metalc ? metalc19 E ZN ZN . A ZN 704 1_555 J O HOH . A HOH 844 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.569 ? metalc ? metalc20 H ZN ZN . A ZN 707 1_555 J O HOH . A HOH 810 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? metalc ? metalc21 I ZN ZN . A ZN 708 1_555 J O HOH . A HOH 810 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? metalc ? metalc22 I ZN ZN . A ZN 708 1_555 J O HOH . A HOH 844 10_776 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5E0Y _atom_sites.fract_transf_matrix[1][1] 0.024005 _atom_sites.fract_transf_matrix[1][2] 0.013859 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.027719 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008162 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 701 1 ZN ZN . C 2 ZN A 1 702 2 ZN ZN . D 2 ZN A 1 703 4 ZN ZN . E 2 ZN A 1 704 5 ZN ZN . F 2 ZN A 1 705 6 ZN ZN . G 2 ZN A 1 706 7 ZN ZN . H 2 ZN A 1 707 8 ZN ZN . I 2 ZN A 1 708 9 ZN ZN . J 3 HOH A 1 801 9 HOH HOH . J 3 HOH A 2 802 18 HOH HOH . J 3 HOH A 3 803 2 HOH HOH . J 3 HOH A 4 804 1 HOH HOH . J 3 HOH A 5 805 25 HOH HOH . J 3 HOH A 6 806 31 HOH HOH . J 3 HOH A 7 807 44 HOH HOH . J 3 HOH A 8 808 24 HOH HOH . J 3 HOH A 9 809 33 HOH HOH . J 3 HOH A 10 810 39 HOH HOH . J 3 HOH A 11 811 14 HOH HOH . J 3 HOH A 12 812 47 HOH HOH . J 3 HOH A 13 813 46 HOH HOH . J 3 HOH A 14 814 22 HOH HOH . J 3 HOH A 15 815 23 HOH HOH . J 3 HOH A 16 816 5 HOH HOH . J 3 HOH A 17 817 19 HOH HOH . J 3 HOH A 18 818 6 HOH HOH . J 3 HOH A 19 819 12 HOH HOH . J 3 HOH A 20 820 11 HOH HOH . J 3 HOH A 21 821 16 HOH HOH . J 3 HOH A 22 822 13 HOH HOH . J 3 HOH A 23 823 50 HOH HOH . J 3 HOH A 24 824 27 HOH HOH . J 3 HOH A 25 825 36 HOH HOH . J 3 HOH A 26 826 8 HOH HOH . J 3 HOH A 27 827 45 HOH HOH . J 3 HOH A 28 828 26 HOH HOH . J 3 HOH A 29 829 20 HOH HOH . J 3 HOH A 30 830 17 HOH HOH . J 3 HOH A 31 831 10 HOH HOH . J 3 HOH A 32 832 4 HOH HOH . J 3 HOH A 33 833 7 HOH HOH . J 3 HOH A 34 834 32 HOH HOH . J 3 HOH A 35 835 34 HOH HOH . J 3 HOH A 36 836 41 HOH HOH . J 3 HOH A 37 837 40 HOH HOH . J 3 HOH A 38 838 49 HOH HOH . J 3 HOH A 39 839 30 HOH HOH . J 3 HOH A 40 840 21 HOH HOH . J 3 HOH A 41 841 3 HOH HOH . J 3 HOH A 42 842 43 HOH HOH . J 3 HOH A 43 843 38 HOH HOH . J 3 HOH A 44 844 15 HOH HOH . J 3 HOH A 45 845 37 HOH HOH . J 3 HOH A 46 846 35 HOH HOH . J 3 HOH A 47 847 29 HOH HOH . J 3 HOH A 48 848 48 HOH HOH . J 3 HOH A 49 849 42 HOH HOH . J 3 HOH A 50 850 28 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 5.337 _atom_site.Cartn_y 25.565 _atom_site.Cartn_z 72.233 _atom_site.occupancy 0.61 _atom_site.B_iso_or_equiv 46.86 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 703 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 33 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #