data_5E14 # _model_server_result.job_id nEelDnEJtC-2jyremB4b5g _model_server_result.datetime_utc '2024-10-12 16:37:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5e14 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":901}' # _entry.id 5E14 # _exptl.entry_id 5E14 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.457 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "4,4'-{[(3R)-3-phenylcyclohexylidene]methanediyl}diphenol" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.98 _cell.angle_gamma 90 _cell.entry_id 5E14 _cell.length_a 55.09 _cell.length_b 81.849 _cell.length_c 58.463 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5E14 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C25 H24 O2' _chem_comp.formula_weight 356.457 _chem_comp.id 5KB _chem_comp.mon_nstd_flag . _chem_comp.name "4,4'-{[(3R)-3-phenylcyclohexylidene]methanediyl}diphenol" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O01 C02 5KB sing 1 n n C03 C02 5KB doub 2 n y C03 C04 5KB sing 3 n y C02 C27 5KB sing 4 n y C04 C05 5KB doub 5 n y C27 C26 5KB doub 6 n y C05 C26 5KB sing 7 n y C05 C06 5KB sing 8 n n C06 C07 5KB sing 9 n n C06 C14 5KB doub 10 n n C15 C14 5KB sing 11 n n C15 C16 5KB sing 12 n n C07 C08 5KB doub 13 n y C07 C13 5KB sing 14 n y C08 C09 5KB sing 15 n y C13 C12 5KB doub 16 n y C14 C25 5KB sing 17 n n C09 C10 5KB doub 18 n y C12 C10 5KB sing 19 n y C10 O11 5KB sing 20 n n C16 C17 5KB sing 21 n n C25 C18 5KB sing 22 n n C17 C18 5KB sing 23 n n C18 C19 5KB sing 24 n n C20 C19 5KB doub 25 n y C20 C21 5KB sing 26 n y C19 C24 5KB sing 27 n y C21 C22 5KB doub 28 n y C24 C23 5KB doub 29 n y C22 C23 5KB sing 30 n y O01 H1 5KB sing 31 n n C03 H2 5KB sing 32 n n C04 H3 5KB sing 33 n n C08 H5 5KB sing 34 n n C09 H6 5KB sing 35 n n O11 H7 5KB sing 36 n n C12 H8 5KB sing 37 n n C13 H9 5KB sing 38 n n C15 H11 5KB sing 39 n n C15 H12 5KB sing 40 n n C16 H13 5KB sing 41 n n C16 H14 5KB sing 42 n n C17 H15 5KB sing 43 n n C17 H16 5KB sing 44 n n C18 H17 5KB sing 45 n n C20 H18 5KB sing 46 n n C21 H19 5KB sing 47 n n C22 H20 5KB sing 48 n n C23 H21 5KB sing 49 n n C24 H22 5KB sing 50 n n C25 H23 5KB sing 51 n n C25 H24 5KB sing 52 n n C26 H25 5KB sing 53 n n C27 H26 5KB sing 54 n n # _atom_sites.entry_id 5E14 _atom_sites.fract_transf_matrix[1][1] 0.018152 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006961 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012218 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018319 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 5KB A 1 900 900 5KB UNK . F 3 5KB B 1 901 901 5KB UNK . G 4 HOH A 1 1001 1 HOH HOH . G 4 HOH A 2 1002 75 HOH HOH . G 4 HOH A 3 1003 22 HOH HOH . G 4 HOH A 4 1004 74 HOH HOH . G 4 HOH A 5 1005 7 HOH HOH . G 4 HOH A 6 1006 28 HOH HOH . G 4 HOH A 7 1007 49 HOH HOH . G 4 HOH A 8 1008 3 HOH HOH . G 4 HOH A 9 1009 65 HOH HOH . G 4 HOH A 10 1010 83 HOH HOH . G 4 HOH A 11 1011 25 HOH HOH . G 4 HOH A 12 1012 4 HOH HOH . G 4 HOH A 13 1013 5 HOH HOH . G 4 HOH A 14 1014 30 HOH HOH . G 4 HOH A 15 1015 69 HOH HOH . G 4 HOH A 16 1016 16 HOH HOH . G 4 HOH A 17 1017 82 HOH HOH . G 4 HOH A 18 1018 48 HOH HOH . G 4 HOH A 19 1019 61 HOH HOH . G 4 HOH A 20 1020 59 HOH HOH . G 4 HOH A 21 1021 78 HOH HOH . G 4 HOH A 22 1022 23 HOH HOH . G 4 HOH A 23 1023 90 HOH HOH . G 4 HOH A 24 1024 88 HOH HOH . G 4 HOH A 25 1025 20 HOH HOH . G 4 HOH A 26 1026 17 HOH HOH . G 4 HOH A 27 1027 8 HOH HOH . G 4 HOH A 28 1028 6 HOH HOH . G 4 HOH A 29 1029 9 HOH HOH . G 4 HOH A 30 1030 58 HOH HOH . G 4 HOH A 31 1031 11 HOH HOH . G 4 HOH A 32 1032 56 HOH HOH . G 4 HOH A 33 1033 39 HOH HOH . G 4 HOH A 34 1034 79 HOH HOH . G 4 HOH A 35 1035 21 HOH HOH . G 4 HOH A 36 1036 89 HOH HOH . G 4 HOH A 37 1037 14 HOH HOH . G 4 HOH A 38 1038 27 HOH HOH . G 4 HOH A 39 1039 41 HOH HOH . G 4 HOH A 40 1040 18 HOH HOH . G 4 HOH A 41 1041 80 HOH HOH . G 4 HOH A 42 1042 26 HOH HOH . G 4 HOH A 43 1043 84 HOH HOH . G 4 HOH A 44 1044 67 HOH HOH . G 4 HOH A 45 1045 54 HOH HOH . G 4 HOH A 46 1046 73 HOH HOH . G 4 HOH A 47 1047 64 HOH HOH . G 4 HOH A 48 1048 66 HOH HOH . G 4 HOH A 49 1049 57 HOH HOH . G 4 HOH A 50 1050 47 HOH HOH . G 4 HOH A 51 1051 24 HOH HOH . H 4 HOH B 1 1001 62 HOH HOH . H 4 HOH B 2 1002 86 HOH HOH . H 4 HOH B 3 1003 55 HOH HOH . H 4 HOH B 4 1004 29 HOH HOH . H 4 HOH B 5 1005 70 HOH HOH . H 4 HOH B 6 1006 52 HOH HOH . H 4 HOH B 7 1007 51 HOH HOH . H 4 HOH B 8 1008 37 HOH HOH . H 4 HOH B 9 1009 33 HOH HOH . H 4 HOH B 10 1010 43 HOH HOH . H 4 HOH B 11 1011 50 HOH HOH . H 4 HOH B 12 1012 63 HOH HOH . H 4 HOH B 13 1013 44 HOH HOH . H 4 HOH B 14 1014 81 HOH HOH . H 4 HOH B 15 1015 53 HOH HOH . H 4 HOH B 16 1016 60 HOH HOH . H 4 HOH B 17 1017 71 HOH HOH . H 4 HOH B 18 1018 38 HOH HOH . H 4 HOH B 19 1019 2 HOH HOH . H 4 HOH B 20 1020 19 HOH HOH . H 4 HOH B 21 1021 12 HOH HOH . H 4 HOH B 22 1022 76 HOH HOH . H 4 HOH B 23 1023 15 HOH HOH . H 4 HOH B 24 1024 46 HOH HOH . H 4 HOH B 25 1025 85 HOH HOH . H 4 HOH B 26 1026 10 HOH HOH . H 4 HOH B 27 1027 40 HOH HOH . H 4 HOH B 28 1028 91 HOH HOH . H 4 HOH B 29 1029 32 HOH HOH . H 4 HOH B 30 1030 87 HOH HOH . H 4 HOH B 31 1031 35 HOH HOH . H 4 HOH B 32 1032 36 HOH HOH . H 4 HOH B 33 1033 42 HOH HOH . H 4 HOH B 34 1034 68 HOH HOH . H 4 HOH B 35 1035 72 HOH HOH . H 4 HOH B 36 1036 31 HOH HOH . H 4 HOH B 37 1037 77 HOH HOH . H 4 HOH B 38 1038 34 HOH HOH . H 4 HOH B 39 1039 13 HOH HOH . I 4 HOH C 1 701 45 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O01 5KB . . . F 3 5.592 6.923 34.691 0.84 33.22 ? O01 5KB 901 B 1 HETATM 2 C C02 5KB . . . F 3 6.947 6.76 34.313 0.84 33.84 ? C02 5KB 901 B 1 HETATM 3 C C03 5KB . . . F 3 7.916 6.532 35.285 0.84 34.59 ? C03 5KB 901 B 1 HETATM 4 C C04 5KB . . . F 3 9.253 6.366 34.905 0.84 35.78 ? C04 5KB 901 B 1 HETATM 5 C C05 5KB . . . F 3 9.619 6.436 33.549 0.84 35.41 ? C05 5KB 901 B 1 HETATM 6 C C06 5KB . . . F 3 11.112 6.244 33.163 0.84 45.57 ? C06 5KB 901 B 1 HETATM 7 C C07 5KB . . . F 3 11.819 4.936 33.67 0.84 40.36 ? C07 5KB 901 B 1 HETATM 8 C C08 5KB . . . F 3 11.275 3.692 33.317 0.84 40.28 ? C08 5KB 901 B 1 HETATM 9 C C09 5KB . . . F 3 11.875 2.523 33.753 0.84 40.79 ? C09 5KB 901 B 1 HETATM 10 C C10 5KB . . . F 3 13.009 2.582 34.544 0.84 42.1 ? C10 5KB 901 B 1 HETATM 11 O O11 5KB . . . F 3 13.62 1.381 34.988 0.84 43.57 ? O11 5KB 901 B 1 HETATM 12 C C12 5KB . . . F 3 13.546 3.808 34.9 0.84 41.66 ? C12 5KB 901 B 1 HETATM 13 C C13 5KB . . . F 3 12.941 4.995 34.463 0.84 40.63 ? C13 5KB 901 B 1 HETATM 14 C C14 5KB . . . F 3 11.764 7.094 32.149 0.84 46.55 ? C14 5KB 901 B 1 HETATM 15 C C15 5KB . . . F 3 11.301 8.528 31.954 0.84 46.74 ? C15 5KB 901 B 1 HETATM 16 C C16 5KB . . . F 3 12.388 9.595 31.791 0.84 46.63 ? C16 5KB 901 B 1 HETATM 17 C C17 5KB . . . F 3 13.799 9.043 31.973 0.84 47.24 ? C17 5KB 901 B 1 HETATM 18 C C18 5KB . . . F 3 13.968 7.852 31.066 0.84 47.75 ? C18 5KB 901 B 1 HETATM 19 C C19 5KB . . . F 3 15.444 7.453 31.098 0.84 47.91 ? C19 5KB 901 B 1 HETATM 20 C C20 5KB . . . F 3 16.082 7.213 32.338 0.84 47.63 ? C20 5KB 901 B 1 HETATM 21 C C21 5KB . . . F 3 17.44 6.844 32.367 0.84 48.34 ? C21 5KB 901 B 1 HETATM 22 C C22 5KB . . . F 3 18.149 6.719 31.184 0.84 48.71 ? C22 5KB 901 B 1 HETATM 23 C C23 5KB . . . F 3 17.518 6.956 29.956 0.84 48 ? C23 5KB 901 B 1 HETATM 24 C C24 5KB . . . F 3 16.149 7.326 29.923 0.84 47.87 ? C24 5KB 901 B 1 HETATM 25 C C25 5KB . . . F 3 13.12 6.675 31.573 0.84 46.78 ? C25 5KB 901 B 1 HETATM 26 C C26 5KB . . . F 3 8.652 6.65 32.592 0.84 34.58 ? C26 5KB 901 B 1 HETATM 27 C C27 5KB . . . F 3 7.305 6.822 32.975 0.84 34.54 ? C27 5KB 901 B 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 27 #