data_5E15
#
_model_server_result.job_id            y0Sfzqd9tMcJ2Kz2aIjxqg 
_model_server_result.datetime_utc      '2024-12-23 17:43:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5e15 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":900}' 
#
_entry.id    5E15 
#
_exptl.entry_id    5E15 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              398.51 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "4,4'-({4-[2-(4-fluorobutoxy)ethyl]cyclohexylidene}methanediyl)diphenol" 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          110.72 
_cell.angle_gamma         90 
_cell.entry_id            5E15 
_cell.length_a            52.527 
_cell.length_b            75.101 
_cell.length_c            57.628 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5E15 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 F N N 
#
_chem_comp.formula           'C25 H31 F O3' 
_chem_comp.formula_weight    398.51 
_chem_comp.id                5KA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "4,4'-({4-[2-(4-fluorobutoxy)ethyl]cyclohexylidene}methanediyl)diphenol" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C26 C27 5KA sing 1 n n 
C26 C17 5KA sing 2 n n 
C27 C14 5KA sing 3 n n 
C19 C18 5KA sing 4 n n 
C19 O20 5KA sing 5 n n 
C17 C18 5KA sing 6 n n 
C17 C16 5KA sing 7 n n 
C14 C15 5KA sing 8 n n 
C14 C06 5KA doub 9 n n 
C15 C16 5KA sing 10 n n 
O11 C10 5KA sing 11 n n 
C09 C10 5KA doub 12 n y 
C09 C08 5KA sing 13 n y 
C10 C12 5KA sing 14 n y 
C08 C07 5KA doub 15 n y 
C12 C13 5KA doub 16 n y 
C07 C13 5KA sing 17 n y 
C07 C06 5KA sing 18 n n 
C06 C05 5KA sing 19 n n 
C04 C05 5KA doub 20 n y 
C04 C03 5KA sing 21 n y 
C05 C28 5KA sing 22 n y 
C03 C02 5KA doub 23 n y 
C28 C29 5KA doub 24 n y 
C02 C29 5KA sing 25 n y 
C02 O01 5KA sing 26 n n 
O01 H1 5KA sing 27 n n 
C03 H2 5KA sing 28 n n 
C04 H3 5KA sing 29 n n 
C08 H5 5KA sing 30 n n 
C09 H6 5KA sing 31 n n 
O11 H7 5KA sing 32 n n 
C12 H8 5KA sing 33 n n 
C13 H9 5KA sing 34 n n 
C15 H11 5KA sing 35 n n 
C15 H12 5KA sing 36 n n 
C16 H13 5KA sing 37 n n 
C16 H14 5KA sing 38 n n 
C17 H15 5KA sing 39 n n 
C18 H16 5KA sing 40 n n 
C18 H17 5KA sing 41 n n 
C19 H18 5KA sing 42 n n 
C19 H19 5KA sing 43 n n 
C26 H21 5KA sing 44 n n 
C26 H22 5KA sing 45 n n 
C27 H23 5KA sing 46 n n 
C27 H24 5KA sing 47 n n 
C28 H25 5KA sing 48 n n 
C29 H26 5KA sing 49 n n 
O20 C1 5KA sing 50 n n 
C1 C2 5KA sing 51 n n 
C2 C3 5KA sing 52 n n 
C3 C4 5KA sing 53 n n 
C4 F1 5KA sing 54 n n 
C1 H4 5KA sing 55 n n 
C1 H10 5KA sing 56 n n 
C2 H20 5KA sing 57 n n 
C2 H27 5KA sing 58 n n 
C3 H28 5KA sing 59 n n 
C3 H29 5KA sing 60 n n 
C4 H30 5KA sing 61 n n 
C4 H31 5KA sing 62 n n 
#
_atom_sites.entry_id                     5E15 
_atom_sites.fract_transf_matrix[1][1]    0.019038 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.007201 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013315 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018553 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 5KA A 1 900 900 5KA 5KA . 
F 3 5KA B 1 901 901 5KA 5KA . 
G 4 HOH A 1 1001 1001 HOH HOH . 
G 4 HOH A 2 1002 1002 HOH HOH . 
G 4 HOH A 3 1003 1003 HOH HOH . 
G 4 HOH A 4 1004 1004 HOH HOH . 
G 4 HOH A 5 1005 1005 HOH HOH . 
G 4 HOH A 6 1006 1006 HOH HOH . 
G 4 HOH A 7 1007 1007 HOH HOH . 
G 4 HOH A 8 1008 1008 HOH HOH . 
G 4 HOH A 9 1009 1009 HOH HOH . 
G 4 HOH A 10 1010 1010 HOH HOH . 
G 4 HOH A 11 1011 1011 HOH HOH . 
G 4 HOH A 12 1012 1012 HOH HOH . 
G 4 HOH A 13 1013 1013 HOH HOH . 
G 4 HOH A 14 1014 1014 HOH HOH . 
G 4 HOH A 15 1015 1015 HOH HOH . 
G 4 HOH A 16 1016 1016 HOH HOH . 
G 4 HOH A 17 1017 1017 HOH HOH . 
G 4 HOH A 18 1018 1018 HOH HOH . 
G 4 HOH A 19 1019 1019 HOH HOH . 
G 4 HOH A 20 1020 1020 HOH HOH . 
G 4 HOH A 21 1021 1021 HOH HOH . 
G 4 HOH A 22 1022 1022 HOH HOH . 
G 4 HOH A 23 1023 1023 HOH HOH . 
G 4 HOH A 24 1024 1024 HOH HOH . 
G 4 HOH A 25 1025 1025 HOH HOH . 
G 4 HOH A 26 1026 1026 HOH HOH . 
G 4 HOH A 27 1027 1027 HOH HOH . 
G 4 HOH A 28 1028 1028 HOH HOH . 
G 4 HOH A 29 1029 1029 HOH HOH . 
G 4 HOH A 30 1030 1030 HOH HOH . 
G 4 HOH A 31 1031 1031 HOH HOH . 
G 4 HOH A 32 1032 1032 HOH HOH . 
G 4 HOH A 33 1033 1033 HOH HOH . 
G 4 HOH A 34 1034 1034 HOH HOH . 
G 4 HOH A 35 1035 1036 HOH HOH . 
G 4 HOH A 36 1036 1035 HOH HOH . 
G 4 HOH A 37 1037 1037 HOH HOH . 
G 4 HOH A 38 1038 1038 HOH HOH . 
G 4 HOH A 39 1039 1039 HOH HOH . 
G 4 HOH A 40 1040 1040 HOH HOH . 
G 4 HOH A 41 1041 1041 HOH HOH . 
G 4 HOH A 42 1042 1042 HOH HOH . 
G 4 HOH A 43 1043 1043 HOH HOH . 
G 4 HOH A 44 1044 1044 HOH HOH . 
G 4 HOH A 45 1045 1045 HOH HOH . 
G 4 HOH A 46 1046 1046 HOH HOH . 
G 4 HOH A 47 1047 1047 HOH HOH . 
G 4 HOH A 48 1048 1048 HOH HOH . 
G 4 HOH A 49 1049 1049 HOH HOH . 
G 4 HOH A 50 1050 1050 HOH HOH . 
G 4 HOH A 51 1051 1051 HOH HOH . 
G 4 HOH A 52 1052 1052 HOH HOH . 
G 4 HOH A 53 1053 1053 HOH HOH . 
G 4 HOH A 54 1054 1054 HOH HOH . 
G 4 HOH A 55 1055 1055 HOH HOH . 
G 4 HOH A 56 1056 1056 HOH HOH . 
G 4 HOH A 57 1057 1057 HOH HOH . 
G 4 HOH A 58 1058 1058 HOH HOH . 
G 4 HOH A 59 1059 1059 HOH HOH . 
G 4 HOH A 60 1060 1060 HOH HOH . 
G 4 HOH A 61 1061 1061 HOH HOH . 
G 4 HOH A 62 1062 1062 HOH HOH . 
G 4 HOH A 63 1063 1063 HOH HOH . 
G 4 HOH A 64 1064 1069 HOH HOH . 
G 4 HOH A 65 1065 1064 HOH HOH . 
G 4 HOH A 66 1066 1065 HOH HOH . 
G 4 HOH A 67 1067 1066 HOH HOH . 
G 4 HOH A 68 1068 1067 HOH HOH . 
G 4 HOH A 69 1069 1068 HOH HOH . 
G 4 HOH A 70 1070 1070 HOH HOH . 
G 4 HOH A 71 1071 1071 HOH HOH . 
G 4 HOH A 72 1072 1072 HOH HOH . 
G 4 HOH A 73 1073 1073 HOH HOH . 
G 4 HOH A 74 1074 1074 HOH HOH . 
G 4 HOH A 75 1075 1075 HOH HOH . 
G 4 HOH A 76 1076 1076 HOH HOH . 
G 4 HOH A 77 1077 1077 HOH HOH . 
G 4 HOH A 78 1078 1078 HOH HOH . 
G 4 HOH A 79 1079 1079 HOH HOH . 
G 4 HOH A 80 1080 1080 HOH HOH . 
G 4 HOH A 81 1081 1081 HOH HOH . 
G 4 HOH A 82 1082 1082 HOH HOH . 
G 4 HOH A 83 1083 1083 HOH HOH . 
G 4 HOH A 84 1084 1084 HOH HOH . 
G 4 HOH A 85 1085 1085 HOH HOH . 
G 4 HOH A 86 1086 1086 HOH HOH . 
G 4 HOH A 87 1087 1087 HOH HOH . 
G 4 HOH A 88 1088 1088 HOH HOH . 
H 4 HOH B 1 1001 1001 HOH HOH . 
H 4 HOH B 2 1002 1002 HOH HOH . 
H 4 HOH B 3 1003 1003 HOH HOH . 
H 4 HOH B 4 1004 1004 HOH HOH . 
H 4 HOH B 5 1005 1005 HOH HOH . 
H 4 HOH B 6 1006 1006 HOH HOH . 
H 4 HOH B 7 1007 1007 HOH HOH . 
H 4 HOH B 8 1008 1008 HOH HOH . 
H 4 HOH B 9 1009 1009 HOH HOH . 
H 4 HOH B 10 1010 1010 HOH HOH . 
H 4 HOH B 11 1011 1011 HOH HOH . 
H 4 HOH B 12 1012 1012 HOH HOH . 
H 4 HOH B 13 1013 1013 HOH HOH . 
H 4 HOH B 14 1014 1014 HOH HOH . 
H 4 HOH B 15 1015 1015 HOH HOH . 
H 4 HOH B 16 1016 1016 HOH HOH . 
H 4 HOH B 17 1017 1017 HOH HOH . 
H 4 HOH B 18 1018 1018 HOH HOH . 
H 4 HOH B 19 1019 1019 HOH HOH . 
H 4 HOH B 20 1020 1020 HOH HOH . 
H 4 HOH B 21 1021 1021 HOH HOH . 
H 4 HOH B 22 1022 1022 HOH HOH . 
H 4 HOH B 23 1023 1023 HOH HOH . 
H 4 HOH B 24 1024 1024 HOH HOH . 
H 4 HOH B 25 1025 1025 HOH HOH . 
H 4 HOH B 26 1026 1026 HOH HOH . 
H 4 HOH B 27 1027 1027 HOH HOH . 
H 4 HOH B 28 1028 1028 HOH HOH . 
H 4 HOH B 29 1029 1029 HOH HOH . 
H 4 HOH B 30 1030 1030 HOH HOH . 
H 4 HOH B 31 1031 1031 HOH HOH . 
H 4 HOH B 32 1032 1032 HOH HOH . 
H 4 HOH B 33 1033 1033 HOH HOH . 
H 4 HOH B 34 1034 1034 HOH HOH . 
H 4 HOH B 35 1035 1035 HOH HOH . 
H 4 HOH B 36 1036 1036 HOH HOH . 
H 4 HOH B 37 1037 1037 HOH HOH . 
H 4 HOH B 38 1038 1038 HOH HOH . 
H 4 HOH B 39 1039 1039 HOH HOH . 
H 4 HOH B 40 1040 1040 HOH HOH . 
H 4 HOH B 41 1041 1041 HOH HOH . 
H 4 HOH B 42 1042 1042 HOH HOH . 
H 4 HOH B 43 1043 1043 HOH HOH . 
H 4 HOH B 44 1044 1044 HOH HOH . 
H 4 HOH B 45 1045 1045 HOH HOH . 
H 4 HOH B 46 1046 1046 HOH HOH . 
H 4 HOH B 47 1047 1047 HOH HOH . 
H 4 HOH B 48 1048 1048 HOH HOH . 
H 4 HOH B 49 1049 1049 HOH HOH . 
H 4 HOH B 50 1050 1050 HOH HOH . 
H 4 HOH B 51 1051 1051 HOH HOH . 
H 4 HOH B 52 1052 1052 HOH HOH . 
H 4 HOH B 53 1053 1053 HOH HOH . 
H 4 HOH B 54 1054 1054 HOH HOH . 
H 4 HOH B 55 1055 1055 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O01 5KA . . . E 3 -1.226 -18.657 25.336 1 29.9 ? O01 5KA 900 A 1 
HETATM 2 C C02 5KA . . . E 3 -1.804 -19.096 24.145 1 31.56 ? C02 5KA 900 A 1 
HETATM 3 C C03 5KA . . . E 3 -1.142 -19.038 22.927 1 30.19 ? C03 5KA 900 A 1 
HETATM 4 C C04 5KA . . . E 3 -1.754 -19.503 21.778 1 31.14 ? C04 5KA 900 A 1 
HETATM 5 C C05 5KA . . . E 3 -3.029 -20.055 21.832 1 32.96 ? C05 5KA 900 A 1 
HETATM 6 C C06 5KA . . . E 3 -3.832 -20.568 20.587 1 30.09 ? C06 5KA 900 A 1 
HETATM 7 C C07 5KA . . . E 3 -5.245 -20.046 20.444 1 28.92 ? C07 5KA 900 A 1 
HETATM 8 C C08 5KA . . . E 3 -5.488 -18.698 20.278 1 27.86 ? C08 5KA 900 A 1 
HETATM 9 C C09 5KA . . . E 3 -6.764 -18.246 20.143 1 27.2 ? C09 5KA 900 A 1 
HETATM 10 C C10 5KA . . . E 3 -7.811 -19.137 20.179 1 25.9 ? C10 5KA 900 A 1 
HETATM 11 O O11 5KA . . . E 3 -9.099 -18.716 20.039 1 26.68 ? O11 5KA 900 A 1 
HETATM 12 C C12 5KA . . . E 3 -7.591 -20.469 20.354 1 26.66 ? C12 5KA 900 A 1 
HETATM 13 C C13 5KA . . . E 3 -6.3 -20.923 20.476 1 27.9 ? C13 5KA 900 A 1 
HETATM 14 C C14 5KA . . . E 3 -3.244 -21.178 19.471 1 32.4 ? C14 5KA 900 A 1 
HETATM 15 C C15 5KA . . . E 3 -1.856 -21.752 19.491 1 33.02 ? C15 5KA 900 A 1 
HETATM 16 C C16 5KA . . . E 3 -1.96 -23.253 19.604 1 33.66 ? C16 5KA 900 A 1 
HETATM 17 C C17 5KA . . . E 3 -2.81 -23.931 18.553 1 34.24 ? C17 5KA 900 A 1 
HETATM 18 C C18 5KA . . . E 3 -3.384 -25.176 19.287 1 53.37 ? C18 5KA 900 A 1 
HETATM 19 C C19 5KA . . . E 3 -3.614 -26.447 18.494 1 52.91 ? C19 5KA 900 A 1 
HETATM 20 O O20 5KA . . . E 3 -4.345 -27.351 19.326 1 52.7 ? O20 5KA 900 A 1 
HETATM 21 C C26 5KA . . . E 3 -3.967 -23.102 17.985 1 33.99 ? C26 5KA 900 A 1 
HETATM 22 C C27 5KA . . . E 3 -4.032 -21.621 18.269 1 32.37 ? C27 5KA 900 A 1 
HETATM 23 C C28 5KA . . . E 3 -3.666 -20.092 23.048 1 32.4 ? C28 5KA 900 A 1 
HETATM 24 C C29 5KA . . . E 3 -3.063 -19.625 24.199 1 32.49 ? C29 5KA 900 A 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           19 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           305 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           24 
#