data_5E15 # _model_server_result.job_id pjDQ5BqmchYBwgHYHDs-1A _model_server_result.datetime_utc '2024-11-08 14:49:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5e15 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":901}' # _entry.id 5E15 # _exptl.entry_id 5E15 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 398.51 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "4,4'-({4-[2-(4-fluorobutoxy)ethyl]cyclohexylidene}methanediyl)diphenol" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.72 _cell.angle_gamma 90 _cell.entry_id 5E15 _cell.length_a 52.527 _cell.length_b 75.101 _cell.length_c 57.628 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5E15 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C25 H31 F O3' _chem_comp.formula_weight 398.51 _chem_comp.id 5KA _chem_comp.mon_nstd_flag . _chem_comp.name "4,4'-({4-[2-(4-fluorobutoxy)ethyl]cyclohexylidene}methanediyl)diphenol" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C26 C27 5KA sing 1 n n C26 C17 5KA sing 2 n n C27 C14 5KA sing 3 n n C19 C18 5KA sing 4 n n C19 O20 5KA sing 5 n n C17 C18 5KA sing 6 n n C17 C16 5KA sing 7 n n C14 C15 5KA sing 8 n n C14 C06 5KA doub 9 n n C15 C16 5KA sing 10 n n O11 C10 5KA sing 11 n n C09 C10 5KA doub 12 n y C09 C08 5KA sing 13 n y C10 C12 5KA sing 14 n y C08 C07 5KA doub 15 n y C12 C13 5KA doub 16 n y C07 C13 5KA sing 17 n y C07 C06 5KA sing 18 n n C06 C05 5KA sing 19 n n C04 C05 5KA doub 20 n y C04 C03 5KA sing 21 n y C05 C28 5KA sing 22 n y C03 C02 5KA doub 23 n y C28 C29 5KA doub 24 n y C02 C29 5KA sing 25 n y C02 O01 5KA sing 26 n n O01 H1 5KA sing 27 n n C03 H2 5KA sing 28 n n C04 H3 5KA sing 29 n n C08 H5 5KA sing 30 n n C09 H6 5KA sing 31 n n O11 H7 5KA sing 32 n n C12 H8 5KA sing 33 n n C13 H9 5KA sing 34 n n C15 H11 5KA sing 35 n n C15 H12 5KA sing 36 n n C16 H13 5KA sing 37 n n C16 H14 5KA sing 38 n n C17 H15 5KA sing 39 n n C18 H16 5KA sing 40 n n C18 H17 5KA sing 41 n n C19 H18 5KA sing 42 n n C19 H19 5KA sing 43 n n C26 H21 5KA sing 44 n n C26 H22 5KA sing 45 n n C27 H23 5KA sing 46 n n C27 H24 5KA sing 47 n n C28 H25 5KA sing 48 n n C29 H26 5KA sing 49 n n O20 C1 5KA sing 50 n n C1 C2 5KA sing 51 n n C2 C3 5KA sing 52 n n C3 C4 5KA sing 53 n n C4 F1 5KA sing 54 n n C1 H4 5KA sing 55 n n C1 H10 5KA sing 56 n n C2 H20 5KA sing 57 n n C2 H27 5KA sing 58 n n C3 H28 5KA sing 59 n n C3 H29 5KA sing 60 n n C4 H30 5KA sing 61 n n C4 H31 5KA sing 62 n n # _atom_sites.entry_id 5E15 _atom_sites.fract_transf_matrix[1][1] 0.019038 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007201 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013315 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018553 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 5KA A 1 900 900 5KA 5KA . F 3 5KA B 1 901 901 5KA 5KA . G 4 HOH A 1 1001 1001 HOH HOH . G 4 HOH A 2 1002 1002 HOH HOH . G 4 HOH A 3 1003 1003 HOH HOH . G 4 HOH A 4 1004 1004 HOH HOH . G 4 HOH A 5 1005 1005 HOH HOH . G 4 HOH A 6 1006 1006 HOH HOH . G 4 HOH A 7 1007 1007 HOH HOH . G 4 HOH A 8 1008 1008 HOH HOH . G 4 HOH A 9 1009 1009 HOH HOH . G 4 HOH A 10 1010 1010 HOH HOH . G 4 HOH A 11 1011 1011 HOH HOH . G 4 HOH A 12 1012 1012 HOH HOH . G 4 HOH A 13 1013 1013 HOH HOH . G 4 HOH A 14 1014 1014 HOH HOH . G 4 HOH A 15 1015 1015 HOH HOH . G 4 HOH A 16 1016 1016 HOH HOH . G 4 HOH A 17 1017 1017 HOH HOH . G 4 HOH A 18 1018 1018 HOH HOH . G 4 HOH A 19 1019 1019 HOH HOH . G 4 HOH A 20 1020 1020 HOH HOH . G 4 HOH A 21 1021 1021 HOH HOH . G 4 HOH A 22 1022 1022 HOH HOH . G 4 HOH A 23 1023 1023 HOH HOH . G 4 HOH A 24 1024 1024 HOH HOH . G 4 HOH A 25 1025 1025 HOH HOH . G 4 HOH A 26 1026 1026 HOH HOH . G 4 HOH A 27 1027 1027 HOH HOH . G 4 HOH A 28 1028 1028 HOH HOH . G 4 HOH A 29 1029 1029 HOH HOH . G 4 HOH A 30 1030 1030 HOH HOH . G 4 HOH A 31 1031 1031 HOH HOH . G 4 HOH A 32 1032 1032 HOH HOH . G 4 HOH A 33 1033 1033 HOH HOH . G 4 HOH A 34 1034 1034 HOH HOH . G 4 HOH A 35 1035 1036 HOH HOH . G 4 HOH A 36 1036 1035 HOH HOH . G 4 HOH A 37 1037 1037 HOH HOH . G 4 HOH A 38 1038 1038 HOH HOH . G 4 HOH A 39 1039 1039 HOH HOH . G 4 HOH A 40 1040 1040 HOH HOH . G 4 HOH A 41 1041 1041 HOH HOH . G 4 HOH A 42 1042 1042 HOH HOH . G 4 HOH A 43 1043 1043 HOH HOH . G 4 HOH A 44 1044 1044 HOH HOH . G 4 HOH A 45 1045 1045 HOH HOH . G 4 HOH A 46 1046 1046 HOH HOH . G 4 HOH A 47 1047 1047 HOH HOH . G 4 HOH A 48 1048 1048 HOH HOH . G 4 HOH A 49 1049 1049 HOH HOH . G 4 HOH A 50 1050 1050 HOH HOH . G 4 HOH A 51 1051 1051 HOH HOH . G 4 HOH A 52 1052 1052 HOH HOH . G 4 HOH A 53 1053 1053 HOH HOH . G 4 HOH A 54 1054 1054 HOH HOH . G 4 HOH A 55 1055 1055 HOH HOH . G 4 HOH A 56 1056 1056 HOH HOH . G 4 HOH A 57 1057 1057 HOH HOH . G 4 HOH A 58 1058 1058 HOH HOH . G 4 HOH A 59 1059 1059 HOH HOH . G 4 HOH A 60 1060 1060 HOH HOH . G 4 HOH A 61 1061 1061 HOH HOH . G 4 HOH A 62 1062 1062 HOH HOH . G 4 HOH A 63 1063 1063 HOH HOH . G 4 HOH A 64 1064 1069 HOH HOH . G 4 HOH A 65 1065 1064 HOH HOH . G 4 HOH A 66 1066 1065 HOH HOH . G 4 HOH A 67 1067 1066 HOH HOH . G 4 HOH A 68 1068 1067 HOH HOH . G 4 HOH A 69 1069 1068 HOH HOH . G 4 HOH A 70 1070 1070 HOH HOH . G 4 HOH A 71 1071 1071 HOH HOH . G 4 HOH A 72 1072 1072 HOH HOH . G 4 HOH A 73 1073 1073 HOH HOH . G 4 HOH A 74 1074 1074 HOH HOH . G 4 HOH A 75 1075 1075 HOH HOH . G 4 HOH A 76 1076 1076 HOH HOH . G 4 HOH A 77 1077 1077 HOH HOH . G 4 HOH A 78 1078 1078 HOH HOH . G 4 HOH A 79 1079 1079 HOH HOH . G 4 HOH A 80 1080 1080 HOH HOH . G 4 HOH A 81 1081 1081 HOH HOH . G 4 HOH A 82 1082 1082 HOH HOH . G 4 HOH A 83 1083 1083 HOH HOH . G 4 HOH A 84 1084 1084 HOH HOH . G 4 HOH A 85 1085 1085 HOH HOH . G 4 HOH A 86 1086 1086 HOH HOH . G 4 HOH A 87 1087 1087 HOH HOH . G 4 HOH A 88 1088 1088 HOH HOH . H 4 HOH B 1 1001 1001 HOH HOH . H 4 HOH B 2 1002 1002 HOH HOH . H 4 HOH B 3 1003 1003 HOH HOH . H 4 HOH B 4 1004 1004 HOH HOH . H 4 HOH B 5 1005 1005 HOH HOH . H 4 HOH B 6 1006 1006 HOH HOH . H 4 HOH B 7 1007 1007 HOH HOH . H 4 HOH B 8 1008 1008 HOH HOH . H 4 HOH B 9 1009 1009 HOH HOH . H 4 HOH B 10 1010 1010 HOH HOH . H 4 HOH B 11 1011 1011 HOH HOH . H 4 HOH B 12 1012 1012 HOH HOH . H 4 HOH B 13 1013 1013 HOH HOH . H 4 HOH B 14 1014 1014 HOH HOH . H 4 HOH B 15 1015 1015 HOH HOH . H 4 HOH B 16 1016 1016 HOH HOH . H 4 HOH B 17 1017 1017 HOH HOH . H 4 HOH B 18 1018 1018 HOH HOH . H 4 HOH B 19 1019 1019 HOH HOH . H 4 HOH B 20 1020 1020 HOH HOH . H 4 HOH B 21 1021 1021 HOH HOH . H 4 HOH B 22 1022 1022 HOH HOH . H 4 HOH B 23 1023 1023 HOH HOH . H 4 HOH B 24 1024 1024 HOH HOH . H 4 HOH B 25 1025 1025 HOH HOH . H 4 HOH B 26 1026 1026 HOH HOH . H 4 HOH B 27 1027 1027 HOH HOH . H 4 HOH B 28 1028 1028 HOH HOH . H 4 HOH B 29 1029 1029 HOH HOH . H 4 HOH B 30 1030 1030 HOH HOH . H 4 HOH B 31 1031 1031 HOH HOH . H 4 HOH B 32 1032 1032 HOH HOH . H 4 HOH B 33 1033 1033 HOH HOH . H 4 HOH B 34 1034 1034 HOH HOH . H 4 HOH B 35 1035 1035 HOH HOH . H 4 HOH B 36 1036 1036 HOH HOH . H 4 HOH B 37 1037 1037 HOH HOH . H 4 HOH B 38 1038 1038 HOH HOH . H 4 HOH B 39 1039 1039 HOH HOH . H 4 HOH B 40 1040 1040 HOH HOH . H 4 HOH B 41 1041 1041 HOH HOH . H 4 HOH B 42 1042 1042 HOH HOH . H 4 HOH B 43 1043 1043 HOH HOH . H 4 HOH B 44 1044 1044 HOH HOH . H 4 HOH B 45 1045 1045 HOH HOH . H 4 HOH B 46 1046 1046 HOH HOH . H 4 HOH B 47 1047 1047 HOH HOH . H 4 HOH B 48 1048 1048 HOH HOH . H 4 HOH B 49 1049 1049 HOH HOH . H 4 HOH B 50 1050 1050 HOH HOH . H 4 HOH B 51 1051 1051 HOH HOH . H 4 HOH B 52 1052 1052 HOH HOH . H 4 HOH B 53 1053 1053 HOH HOH . H 4 HOH B 54 1054 1054 HOH HOH . H 4 HOH B 55 1055 1055 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O01 5KA . . . F 3 9.082 -11.319 -8.795 1 36.22 ? O01 5KA 901 B 1 HETATM 2 C C02 5KA . . . F 3 7.8 -11.567 -8.316 1 35.17 ? C02 5KA 901 B 1 HETATM 3 C C03 5KA . . . F 3 7.47 -11.327 -6.999 1 35.13 ? C03 5KA 901 B 1 HETATM 4 C C04 5KA . . . F 3 6.188 -11.595 -6.553 1 34.35 ? C04 5KA 901 B 1 HETATM 5 C C05 5KA . . . F 3 5.242 -12.086 -7.444 1 34.44 ? C05 5KA 901 B 1 HETATM 6 C C06 5KA . . . F 3 3.79 -12.421 -7.003 1 34.79 ? C06 5KA 901 B 1 HETATM 7 C C07 5KA . . . F 3 3.105 -13.553 -7.687 1 33.15 ? C07 5KA 901 B 1 HETATM 8 C C08 5KA . . . F 3 3.579 -14.834 -7.559 1 33.21 ? C08 5KA 901 B 1 HETATM 9 C C09 5KA . . . F 3 2.965 -15.876 -8.185 1 34.34 ? C09 5KA 901 B 1 HETATM 10 C C10 5KA . . . F 3 1.866 -15.637 -8.966 1 36.36 ? C10 5KA 901 B 1 HETATM 11 O O11 5KA . . . F 3 1.234 -16.696 -9.604 1 39.14 ? O11 5KA 901 B 1 HETATM 12 C C12 5KA . . . F 3 1.398 -14.35 -9.104 1 35.32 ? C12 5KA 901 B 1 HETATM 13 C C13 5KA . . . F 3 2.014 -13.301 -8.464 1 33.04 ? C13 5KA 901 B 1 HETATM 14 C C14 5KA . . . F 3 3.108 -11.652 -6.07 1 38.02 ? C14 5KA 901 B 1 HETATM 15 C C15 5KA . . . F 3 3.504 -10.203 -5.876 1 40.35 ? C15 5KA 901 B 1 HETATM 16 C C16 5KA . . . F 3 2.721 -9.47 -4.803 1 40.48 ? C16 5KA 901 B 1 HETATM 17 C C17 5KA . . . F 3 1.25 -9.795 -4.681 1 40.21 ? C17 5KA 901 B 1 HETATM 18 C C18 5KA . . . F 3 0.478 -8.502 -4.959 1 66.18 ? C18 5KA 901 B 1 HETATM 19 C C19 5KA . . . F 3 -1.015 -8.738 -5.167 1 66.21 ? C19 5KA 901 B 1 HETATM 20 O O20 5KA . . . F 3 -1.522 -9.546 -4.108 1 65.9 ? O20 5KA 901 B 1 HETATM 21 C C26 5KA . . . F 3 0.768 -10.93 -5.563 1 39.52 ? C26 5KA 901 B 1 HETATM 22 C C27 5KA . . . F 3 1.763 -12.062 -5.522 1 38.76 ? C27 5KA 901 B 1 HETATM 23 C C28 5KA . . . F 3 5.589 -12.33 -8.746 1 33.48 ? C28 5KA 901 B 1 HETATM 24 C C29 5KA . . . F 3 6.867 -12.064 -9.177 1 34.38 ? C29 5KA 901 B 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 24 #