data_5E1I # _model_server_result.job_id faWyhCa3kfn7VbLyyzI8kg _model_server_result.datetime_utc '2024-11-27 03:51:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5e1i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 5E1I # _exptl.entry_id 5E1I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.04 _cell.angle_gamma 90 _cell.entry_id 5E1I _cell.length_a 61.183 _cell.length_b 93.957 _cell.length_c 75.391 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5E1I _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F 1 1 B,G 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 316 A CYS 354 1_555 D C02 6B8 . A 6B8 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.975 ? metalc ? metalc1 A O ASP 213 A ASP 251 1_555 C NA NA . A NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.73 ? metalc ? metalc2 A OD1 ASP 335 A ASP 373 1_555 C NA NA . A NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.611 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5E1I _atom_sites.fract_transf_matrix[1][1] 0.016344 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000868 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010643 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013283 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NA A 1 501 2 NA NA . D 3 6B8 A 1 502 1 6B8 T0G . E 4 GOL A 1 503 1 GOL GOL . F 5 HOH A 1 601 55 HOH HOH . F 5 HOH A 2 602 53 HOH HOH . F 5 HOH A 3 603 26 HOH HOH . F 5 HOH A 4 604 166 HOH HOH . F 5 HOH A 5 605 3 HOH HOH . F 5 HOH A 6 606 71 HOH HOH . F 5 HOH A 7 607 58 HOH HOH . F 5 HOH A 8 608 15 HOH HOH . F 5 HOH A 9 609 7 HOH HOH . F 5 HOH A 10 610 86 HOH HOH . F 5 HOH A 11 611 258 HOH HOH . F 5 HOH A 12 612 73 HOH HOH . F 5 HOH A 13 613 5 HOH HOH . F 5 HOH A 14 614 19 HOH HOH . F 5 HOH A 15 615 119 HOH HOH . F 5 HOH A 16 616 174 HOH HOH . F 5 HOH A 17 617 48 HOH HOH . F 5 HOH A 18 618 69 HOH HOH . F 5 HOH A 19 619 11 HOH HOH . F 5 HOH A 20 620 70 HOH HOH . F 5 HOH A 21 621 147 HOH HOH . F 5 HOH A 22 622 16 HOH HOH . F 5 HOH A 23 623 45 HOH HOH . F 5 HOH A 24 624 88 HOH HOH . F 5 HOH A 25 625 78 HOH HOH . F 5 HOH A 26 626 108 HOH HOH . F 5 HOH A 27 627 112 HOH HOH . F 5 HOH A 28 628 29 HOH HOH . F 5 HOH A 29 629 5 HOH HOH . F 5 HOH A 30 630 36 HOH HOH . F 5 HOH A 31 631 80 HOH HOH . F 5 HOH A 32 632 122 HOH HOH . F 5 HOH A 33 633 64 HOH HOH . F 5 HOH A 34 634 89 HOH HOH . F 5 HOH A 35 635 32 HOH HOH . F 5 HOH A 36 636 87 HOH HOH . F 5 HOH A 37 637 3 HOH HOH . F 5 HOH A 38 638 73 HOH HOH . F 5 HOH A 39 639 65 HOH HOH . F 5 HOH A 40 640 6 HOH HOH . F 5 HOH A 41 641 109 HOH HOH . F 5 HOH A 42 642 10 HOH HOH . F 5 HOH A 43 643 189 HOH HOH . F 5 HOH A 44 644 68 HOH HOH . F 5 HOH A 45 645 65 HOH HOH . F 5 HOH A 46 646 82 HOH HOH . F 5 HOH A 47 647 88 HOH HOH . F 5 HOH A 48 648 28 HOH HOH . F 5 HOH A 49 649 4 HOH HOH . F 5 HOH A 50 650 204 HOH HOH . F 5 HOH A 51 651 14 HOH HOH . F 5 HOH A 52 652 180 HOH HOH . F 5 HOH A 53 653 12 HOH HOH . F 5 HOH A 54 654 78 HOH HOH . F 5 HOH A 55 655 67 HOH HOH . F 5 HOH A 56 656 101 HOH HOH . F 5 HOH A 57 657 96 HOH HOH . F 5 HOH A 58 658 114 HOH HOH . F 5 HOH A 59 659 111 HOH HOH . F 5 HOH A 60 660 18 HOH HOH . F 5 HOH A 61 661 80 HOH HOH . F 5 HOH A 62 662 135 HOH HOH . F 5 HOH A 63 663 170 HOH HOH . F 5 HOH A 64 664 20 HOH HOH . F 5 HOH A 65 665 46 HOH HOH . F 5 HOH A 66 666 116 HOH HOH . F 5 HOH A 67 667 188 HOH HOH . F 5 HOH A 68 668 184 HOH HOH . F 5 HOH A 69 669 87 HOH HOH . F 5 HOH A 70 670 242 HOH HOH . F 5 HOH A 71 671 91 HOH HOH . F 5 HOH A 72 672 209 HOH HOH . F 5 HOH A 73 673 1 HOH HOH . F 5 HOH A 74 674 331 HOH HOH . F 5 HOH A 75 675 117 HOH HOH . F 5 HOH A 76 676 21 HOH HOH . F 5 HOH A 77 677 7 HOH HOH . F 5 HOH A 78 678 54 HOH HOH . F 5 HOH A 79 679 14 HOH HOH . F 5 HOH A 80 680 72 HOH HOH . F 5 HOH A 81 681 68 HOH HOH . F 5 HOH A 82 682 49 HOH HOH . F 5 HOH A 83 683 146 HOH HOH . F 5 HOH A 84 684 195 HOH HOH . F 5 HOH A 85 685 164 HOH HOH . F 5 HOH A 86 686 77 HOH HOH . F 5 HOH A 87 687 81 HOH HOH . F 5 HOH A 88 688 255 HOH HOH . F 5 HOH A 89 689 66 HOH HOH . F 5 HOH A 90 690 85 HOH HOH . F 5 HOH A 91 691 79 HOH HOH . F 5 HOH A 92 692 75 HOH HOH . F 5 HOH A 93 693 57 HOH HOH . F 5 HOH A 94 694 82 HOH HOH . F 5 HOH A 95 695 71 HOH HOH . F 5 HOH A 96 696 81 HOH HOH . F 5 HOH A 97 697 34 HOH HOH . F 5 HOH A 98 698 280 HOH HOH . F 5 HOH A 99 699 132 HOH HOH . F 5 HOH A 100 700 123 HOH HOH . F 5 HOH A 101 701 76 HOH HOH . F 5 HOH A 102 702 115 HOH HOH . F 5 HOH A 103 703 74 HOH HOH . F 5 HOH A 104 704 222 HOH HOH . F 5 HOH A 105 705 33 HOH HOH . F 5 HOH A 106 706 70 HOH HOH . F 5 HOH A 107 707 10 HOH HOH . F 5 HOH A 108 708 323 HOH HOH . F 5 HOH A 109 709 92 HOH HOH . F 5 HOH A 110 710 63 HOH HOH . F 5 HOH A 111 711 212 HOH HOH . F 5 HOH A 112 712 44 HOH HOH . F 5 HOH A 113 713 249 HOH HOH . F 5 HOH A 114 714 83 HOH HOH . F 5 HOH A 115 715 90 HOH HOH . F 5 HOH A 116 716 8 HOH HOH . F 5 HOH A 117 717 176 HOH HOH . F 5 HOH A 118 718 9 HOH HOH . F 5 HOH A 119 719 299 HOH HOH . F 5 HOH A 120 720 317 HOH HOH . F 5 HOH A 121 721 51 HOH HOH . F 5 HOH A 122 722 155 HOH HOH . F 5 HOH A 123 723 153 HOH HOH . F 5 HOH A 124 724 84 HOH HOH . F 5 HOH A 125 725 99 HOH HOH . F 5 HOH A 126 726 335 HOH HOH . F 5 HOH A 127 727 326 HOH HOH . F 5 HOH A 128 728 13 HOH HOH . F 5 HOH A 129 729 215 HOH HOH . F 5 HOH A 130 730 314 HOH HOH . F 5 HOH A 131 731 183 HOH HOH . F 5 HOH A 132 732 158 HOH HOH . F 5 HOH A 133 733 316 HOH HOH . F 5 HOH A 134 734 304 HOH HOH . F 5 HOH A 135 735 321 HOH HOH . F 5 HOH A 136 736 16 HOH HOH . F 5 HOH A 137 737 86 HOH HOH . F 5 HOH A 138 738 66 HOH HOH . F 5 HOH A 139 739 193 HOH HOH . F 5 HOH A 140 740 2 HOH HOH . F 5 HOH A 141 741 198 HOH HOH . F 5 HOH A 142 742 187 HOH HOH . F 5 HOH A 143 743 207 HOH HOH . F 5 HOH A 144 744 313 HOH HOH . F 5 HOH A 145 745 17 HOH HOH . F 5 HOH A 146 746 171 HOH HOH . F 5 HOH A 147 747 220 HOH HOH . F 5 HOH A 148 748 230 HOH HOH . F 5 HOH A 149 749 206 HOH HOH . F 5 HOH A 150 750 324 HOH HOH . F 5 HOH A 151 751 223 HOH HOH . G 5 HOH B 1 501 131 HOH HOH . G 5 HOH B 2 502 52 HOH HOH . G 5 HOH B 3 503 278 HOH HOH . G 5 HOH B 4 504 61 HOH HOH . G 5 HOH B 5 505 229 HOH HOH . G 5 HOH B 6 506 29 HOH HOH . G 5 HOH B 7 507 72 HOH HOH . G 5 HOH B 8 508 48 HOH HOH . G 5 HOH B 9 509 125 HOH HOH . G 5 HOH B 10 510 32 HOH HOH . G 5 HOH B 11 511 56 HOH HOH . G 5 HOH B 12 512 4 HOH HOH . G 5 HOH B 13 513 40 HOH HOH . G 5 HOH B 14 514 75 HOH HOH . G 5 HOH B 15 515 47 HOH HOH . G 5 HOH B 16 516 15 HOH HOH . G 5 HOH B 17 517 39 HOH HOH . G 5 HOH B 18 518 9 HOH HOH . G 5 HOH B 19 519 41 HOH HOH . G 5 HOH B 20 520 38 HOH HOH . G 5 HOH B 21 521 106 HOH HOH . G 5 HOH B 22 522 30 HOH HOH . G 5 HOH B 23 523 22 HOH HOH . G 5 HOH B 24 524 24 HOH HOH . G 5 HOH B 25 525 41 HOH HOH . G 5 HOH B 26 526 58 HOH HOH . G 5 HOH B 27 527 152 HOH HOH . G 5 HOH B 28 528 113 HOH HOH . G 5 HOH B 29 529 6 HOH HOH . G 5 HOH B 30 530 43 HOH HOH . G 5 HOH B 31 531 79 HOH HOH . G 5 HOH B 32 532 36 HOH HOH . G 5 HOH B 33 533 91 HOH HOH . G 5 HOH B 34 534 24 HOH HOH . G 5 HOH B 35 535 161 HOH HOH . G 5 HOH B 36 536 60 HOH HOH . G 5 HOH B 37 537 44 HOH HOH . G 5 HOH B 38 538 306 HOH HOH . G 5 HOH B 39 539 59 HOH HOH . G 5 HOH B 40 540 165 HOH HOH . G 5 HOH B 41 541 67 HOH HOH . G 5 HOH B 42 542 294 HOH HOH . G 5 HOH B 43 543 343 HOH HOH . G 5 HOH B 44 544 27 HOH HOH . G 5 HOH B 45 545 118 HOH HOH . G 5 HOH B 46 546 38 HOH HOH . G 5 HOH B 47 547 8 HOH HOH . G 5 HOH B 48 548 56 HOH HOH . G 5 HOH B 49 549 37 HOH HOH . G 5 HOH B 50 550 191 HOH HOH . G 5 HOH B 51 551 322 HOH HOH . G 5 HOH B 52 552 2 HOH HOH . G 5 HOH B 53 553 89 HOH HOH . G 5 HOH B 54 554 30 HOH HOH . G 5 HOH B 55 555 28 HOH HOH . G 5 HOH B 56 556 216 HOH HOH . G 5 HOH B 57 557 243 HOH HOH . G 5 HOH B 58 558 42 HOH HOH . G 5 HOH B 59 559 50 HOH HOH . G 5 HOH B 60 560 62 HOH HOH . G 5 HOH B 61 561 93 HOH HOH . G 5 HOH B 62 562 163 HOH HOH . G 5 HOH B 63 563 104 HOH HOH . G 5 HOH B 64 564 59 HOH HOH . G 5 HOH B 65 565 55 HOH HOH . G 5 HOH B 66 566 39 HOH HOH . G 5 HOH B 67 567 134 HOH HOH . G 5 HOH B 68 568 37 HOH HOH . G 5 HOH B 69 569 26 HOH HOH . G 5 HOH B 70 570 169 HOH HOH . G 5 HOH B 71 571 46 HOH HOH . G 5 HOH B 72 572 98 HOH HOH . G 5 HOH B 73 573 156 HOH HOH . G 5 HOH B 74 574 143 HOH HOH . G 5 HOH B 75 575 43 HOH HOH . G 5 HOH B 76 576 27 HOH HOH . G 5 HOH B 77 577 45 HOH HOH . G 5 HOH B 78 578 23 HOH HOH . G 5 HOH B 79 579 235 HOH HOH . G 5 HOH B 80 580 244 HOH HOH . G 5 HOH B 81 581 57 HOH HOH . G 5 HOH B 82 582 35 HOH HOH . G 5 HOH B 83 583 160 HOH HOH . G 5 HOH B 84 584 11 HOH HOH . G 5 HOH B 85 585 31 HOH HOH . G 5 HOH B 86 586 97 HOH HOH . G 5 HOH B 87 587 52 HOH HOH . G 5 HOH B 88 588 77 HOH HOH . G 5 HOH B 89 589 61 HOH HOH . G 5 HOH B 90 590 126 HOH HOH . G 5 HOH B 91 591 85 HOH HOH . G 5 HOH B 92 592 100 HOH HOH . G 5 HOH B 93 593 96 HOH HOH . G 5 HOH B 94 594 137 HOH HOH . G 5 HOH B 95 595 138 HOH HOH . G 5 HOH B 96 596 90 HOH HOH . G 5 HOH B 97 597 12 HOH HOH . G 5 HOH B 98 598 53 HOH HOH . G 5 HOH B 99 599 129 HOH HOH . G 5 HOH B 100 600 93 HOH HOH . G 5 HOH B 101 601 13 HOH HOH . G 5 HOH B 102 602 64 HOH HOH . G 5 HOH B 103 603 94 HOH HOH . G 5 HOH B 104 604 25 HOH HOH . G 5 HOH B 105 605 54 HOH HOH . G 5 HOH B 106 606 224 HOH HOH . G 5 HOH B 107 607 40 HOH HOH . G 5 HOH B 108 608 94 HOH HOH . G 5 HOH B 109 609 128 HOH HOH . G 5 HOH B 110 610 20 HOH HOH . G 5 HOH B 111 611 151 HOH HOH . G 5 HOH B 112 612 92 HOH HOH . G 5 HOH B 113 613 218 HOH HOH . G 5 HOH B 114 614 154 HOH HOH . G 5 HOH B 115 615 264 HOH HOH . G 5 HOH B 116 616 95 HOH HOH . G 5 HOH B 117 617 130 HOH HOH . G 5 HOH B 118 618 133 HOH HOH . G 5 HOH B 119 619 177 HOH HOH . G 5 HOH B 120 620 271 HOH HOH . G 5 HOH B 121 621 279 HOH HOH . G 5 HOH B 122 622 51 HOH HOH . G 5 HOH B 123 623 95 HOH HOH . G 5 HOH B 124 624 332 HOH HOH . G 5 HOH B 125 625 42 HOH HOH . G 5 HOH B 126 626 62 HOH HOH . G 5 HOH B 127 627 63 HOH HOH . G 5 HOH B 128 628 248 HOH HOH . G 5 HOH B 129 629 325 HOH HOH . G 5 HOH B 130 630 182 HOH HOH . G 5 HOH B 131 631 337 HOH HOH . G 5 HOH B 132 632 145 HOH HOH . G 5 HOH B 133 633 310 HOH HOH . G 5 HOH B 134 634 60 HOH HOH . G 5 HOH B 135 635 319 HOH HOH . G 5 HOH B 136 636 49 HOH HOH . G 5 HOH B 137 637 47 HOH HOH . G 5 HOH B 138 638 315 HOH HOH . G 5 HOH B 139 639 199 HOH HOH . G 5 HOH B 140 640 219 HOH HOH . G 5 HOH B 141 641 31 HOH HOH . G 5 HOH B 142 642 102 HOH HOH . G 5 HOH B 143 643 261 HOH HOH . G 5 HOH B 144 644 157 HOH HOH . G 5 HOH B 145 645 268 HOH HOH . G 5 HOH B 146 646 328 HOH HOH . G 5 HOH B 147 647 34 HOH HOH . G 5 HOH B 148 648 312 HOH HOH . G 5 HOH B 149 649 327 HOH HOH . G 5 HOH B 150 650 336 HOH HOH . G 5 HOH B 151 651 311 HOH HOH . G 5 HOH B 152 652 330 HOH HOH . G 5 HOH B 153 653 35 HOH HOH . G 5 HOH B 154 654 194 HOH HOH . G 5 HOH B 155 655 25 HOH HOH . G 5 HOH B 156 656 318 HOH HOH . G 5 HOH B 157 657 181 HOH HOH . G 5 HOH B 158 658 149 HOH HOH . G 5 HOH B 159 659 167 HOH HOH . G 5 HOH B 160 660 334 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 81.272 _atom_site.Cartn_y -8.293 _atom_site.Cartn_z 63.39 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 20.16 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 501 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 33 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #