data_5E2L # _model_server_result.job_id aDASB49NmsWkhvxM6Ob2vw _model_server_result.datetime_utc '2024-11-12 21:35:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5e2l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":504}' # _entry.id 5E2L # _exptl.entry_id 5E2L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5E2L _cell.length_a 203.989 _cell.length_b 203.989 _cell.length_c 66.904 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5E2L _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 x-y,-y,-z+1/3 1 0 0 0 -1 0 0 0 -1 0 0 22.301333 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 89 A CYS 87 1_555 D MN MN . A MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.431 ? metalc ? metalc2 A NE2 HIS 371 A HIS 369 1_555 D MN MN . A MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? metalc ? metalc3 A OE2 GLU 413 A GLU 411 1_555 D MN MN . A MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? metalc ? metalc4 A OD2 ASP 443 A ASP 441 1_555 D MN MN . A MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc5 B SG CYS 89 B CYS 87 1_555 N MN MN . B MN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? metalc ? metalc6 B NE2 HIS 371 B HIS 369 1_555 N MN MN . B MN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.369 ? metalc ? metalc7 B OE2 GLU 413 B GLU 411 1_555 N MN MN . B MN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.007 ? metalc ? metalc8 B OD2 ASP 443 B ASP 441 1_555 N MN MN . B MN 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 326 n n S O2 SO4 doub 327 n n S O3 SO4 sing 328 n n S O4 SO4 sing 329 n n # _atom_sites.entry_id 5E2L _atom_sites.fract_transf_matrix[1][1] 0.004902 _atom_sites.fract_transf_matrix[1][2] 0.00283 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005661 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014947 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 501 3 SO4 SO4 . D 3 MN A 1 502 700 MN MN . E 4 CL A 1 503 10 CL CL . F 5 GOL A 1 504 11 GOL GOL . G 4 CL A 1 505 12 CL CL . H 4 CL A 1 506 13 CL CL . I 6 DPN A 1 507 901 DPN DPN . J 2 SO4 B 1 501 1 SO4 SO4 . K 2 SO4 B 1 502 2 SO4 SO4 . L 2 SO4 B 1 503 4 SO4 SO4 . M 2 SO4 B 1 504 5 SO4 SO4 . N 3 MN B 1 505 701 MN MN . O 4 CL B 1 506 7 CL CL . P 5 GOL B 1 507 9 GOL GOL . Q 4 CL B 1 508 14 CL CL . R 6 DPN B 1 509 900 DPN DPN . S 7 HOH A 1 601 16 HOH HOH . S 7 HOH A 2 602 48 HOH HOH . S 7 HOH A 3 603 63 HOH HOH . S 7 HOH A 4 604 62 HOH HOH . S 7 HOH A 5 605 22 HOH HOH . S 7 HOH A 6 606 56 HOH HOH . S 7 HOH A 7 607 50 HOH HOH . S 7 HOH A 8 608 42 HOH HOH . S 7 HOH A 9 609 23 HOH HOH . S 7 HOH A 10 610 14 HOH HOH . S 7 HOH A 11 611 33 HOH HOH . S 7 HOH A 12 612 11 HOH HOH . S 7 HOH A 13 613 10 HOH HOH . S 7 HOH A 14 614 28 HOH HOH . S 7 HOH A 15 615 57 HOH HOH . S 7 HOH A 16 616 49 HOH HOH . S 7 HOH A 17 617 34 HOH HOH . S 7 HOH A 18 618 82 HOH HOH . S 7 HOH A 19 619 8 HOH HOH . S 7 HOH A 20 620 7 HOH HOH . S 7 HOH A 21 621 9 HOH HOH . S 7 HOH A 22 622 47 HOH HOH . S 7 HOH A 23 623 3 HOH HOH . S 7 HOH A 24 624 69 HOH HOH . S 7 HOH A 25 625 68 HOH HOH . S 7 HOH A 26 626 13 HOH HOH . S 7 HOH A 27 627 46 HOH HOH . S 7 HOH A 28 628 31 HOH HOH . S 7 HOH A 29 629 40 HOH HOH . S 7 HOH A 30 630 44 HOH HOH . S 7 HOH A 31 631 39 HOH HOH . S 7 HOH A 32 632 45 HOH HOH . S 7 HOH A 33 633 43 HOH HOH . T 7 HOH B 1 601 64 HOH HOH . T 7 HOH B 2 602 29 HOH HOH . T 7 HOH B 3 603 60 HOH HOH . T 7 HOH B 4 604 24 HOH HOH . T 7 HOH B 5 605 19 HOH HOH . T 7 HOH B 6 606 55 HOH HOH . T 7 HOH B 7 607 41 HOH HOH . T 7 HOH B 8 608 30 HOH HOH . T 7 HOH B 9 609 17 HOH HOH . T 7 HOH B 10 610 67 HOH HOH . T 7 HOH B 11 611 27 HOH HOH . T 7 HOH B 12 612 54 HOH HOH . T 7 HOH B 13 613 12 HOH HOH . T 7 HOH B 14 614 20 HOH HOH . T 7 HOH B 15 615 25 HOH HOH . T 7 HOH B 16 616 26 HOH HOH . T 7 HOH B 17 617 5 HOH HOH . T 7 HOH B 18 618 18 HOH HOH . T 7 HOH B 19 619 72 HOH HOH . T 7 HOH B 20 620 1 HOH HOH . T 7 HOH B 21 621 66 HOH HOH . T 7 HOH B 22 622 53 HOH HOH . T 7 HOH B 23 623 2 HOH HOH . T 7 HOH B 24 624 65 HOH HOH . T 7 HOH B 25 625 70 HOH HOH . T 7 HOH B 26 626 35 HOH HOH . T 7 HOH B 27 627 61 HOH HOH . T 7 HOH B 28 628 71 HOH HOH . T 7 HOH B 29 629 15 HOH HOH . T 7 HOH B 30 630 37 HOH HOH . T 7 HOH B 31 631 32 HOH HOH . T 7 HOH B 32 632 6 HOH HOH . T 7 HOH B 33 633 73 HOH HOH . T 7 HOH B 34 634 59 HOH HOH . T 7 HOH B 35 635 81 HOH HOH . T 7 HOH B 36 636 74 HOH HOH . T 7 HOH B 37 637 21 HOH HOH . T 7 HOH B 38 638 51 HOH HOH . T 7 HOH B 39 639 75 HOH HOH . T 7 HOH B 40 640 58 HOH HOH . T 7 HOH B 41 641 38 HOH HOH . T 7 HOH B 42 642 52 HOH HOH . T 7 HOH B 43 643 78 HOH HOH . T 7 HOH B 44 644 4 HOH HOH . T 7 HOH B 45 645 76 HOH HOH . T 7 HOH B 46 646 80 HOH HOH . T 7 HOH B 47 647 77 HOH HOH . T 7 HOH B 48 648 36 HOH HOH . T 7 HOH B 49 649 79 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . M 2 126.549 -43.974 3.543 1 62.87 ? S SO4 504 B 1 HETATM 2 O O1 SO4 . . . M 2 126.053 -45.37 3.544 1 60.64 ? O1 SO4 504 B 1 HETATM 3 O O2 SO4 . . . M 2 126.214 -43.353 2.236 1 62.78 ? O2 SO4 504 B 1 HETATM 4 O O3 SO4 . . . M 2 128.016 -43.984 3.76 1 62.19 ? O3 SO4 504 B 1 HETATM 5 O O4 SO4 . . . M 2 125.917 -43.184 4.62 1 63.42 ? O4 SO4 504 B 1 # _model_server_stats.io_time_ms 42 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #