data_5E4Z
#
_model_server_result.job_id            GnDrJDB0dT2qBb5Ot45Lew 
_model_server_result.datetime_utc      '2024-11-16 22:31:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5e4z 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":401}' 
#
_entry.id    5E4Z 
#
_exptl.entry_id    5E4Z 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              238.278 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PENTAETHYLENE GLYCOL' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5E4Z 
_cell.length_a            56.29 
_cell.length_b            122.631 
_cell.length_c            127.296 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5E4Z 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3,4 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 
3 'crystal symmetry operation' 3_554 -x,y,-z-1 -1 0 0 0 1 0 0 0 -1 0 0 -127.296 
4 'crystal symmetry operation' 4_554 x,-y,-z-1 1 0 0 0 -1 0 0 0 -1 0 0 -127.296 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A NZ LYS 210 A LYS 210 1_555 E C4A PLP . A PLP 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? 
metalc ? metalc1 D NA NA . A NA 403 1_555 F O HOH . A HOH 546 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.825 ? 
metalc ? metalc2 D NA NA . A NA 403 1_555 F O HOH . A HOH 593 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.744 ? 
metalc ? metalc3 D NA NA . A NA 403 1_555 F O HOH . A HOH 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.473 ? 
#
_chem_comp.formula           'C10 H22 O6' 
_chem_comp.formula_weight    238.278 
_chem_comp.id                1PE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PENTAETHYLENE GLYCOL' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     PEG400 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
OH2 C12 1PE sing 1 n n 
OH2 HO2 1PE sing 2 n n 
C12 C22 1PE sing 3 n n 
C12 H121 1PE sing 4 n n 
C12 H122 1PE sing 5 n n 
C22 OH3 1PE sing 6 n n 
C22 H221 1PE sing 7 n n 
C22 H222 1PE sing 8 n n 
OH3 C23 1PE sing 9 n n 
C13 C23 1PE sing 10 n n 
C13 OH4 1PE sing 11 n n 
C13 H131 1PE sing 12 n n 
C13 H132 1PE sing 13 n n 
C23 H231 1PE sing 14 n n 
C23 H232 1PE sing 15 n n 
OH4 C24 1PE sing 16 n n 
C14 C24 1PE sing 17 n n 
C14 OH5 1PE sing 18 n n 
C14 H141 1PE sing 19 n n 
C14 H142 1PE sing 20 n n 
C24 H241 1PE sing 21 n n 
C24 H242 1PE sing 22 n n 
OH5 C25 1PE sing 23 n n 
C15 C25 1PE sing 24 n n 
C15 OH6 1PE sing 25 n n 
C15 H151 1PE sing 26 n n 
C15 H152 1PE sing 27 n n 
C25 H251 1PE sing 28 n n 
C25 H252 1PE sing 29 n n 
OH6 C26 1PE sing 30 n n 
C16 C26 1PE sing 31 n n 
C16 OH7 1PE sing 32 n n 
C16 H161 1PE sing 33 n n 
C16 H162 1PE sing 34 n n 
C26 H261 1PE sing 35 n n 
C26 H262 1PE sing 36 n n 
OH7 HO7 1PE sing 37 n n 
#
_atom_sites.entry_id                     5E4Z 
_atom_sites.fract_transf_matrix[1][1]    0.017765 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008155 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007856 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 1PE A 1 401 400 1PE 1PE . 
C 3 PEG A 1 402 1 PEG PEG . 
D 4 NA A 1 403 1 NA NA . 
E 5 PLP A 1 404 210 PLP PLP . 
F 6 HOH A 1 501 107 HOH HOH . 
F 6 HOH A 2 502 90 HOH HOH . 
F 6 HOH A 3 503 39 HOH HOH . 
F 6 HOH A 4 504 85 HOH HOH . 
F 6 HOH A 5 505 8 HOH HOH . 
F 6 HOH A 6 506 57 HOH HOH . 
F 6 HOH A 7 507 17 HOH HOH . 
F 6 HOH A 8 508 86 HOH HOH . 
F 6 HOH A 9 509 6 HOH HOH . 
F 6 HOH A 10 510 78 HOH HOH . 
F 6 HOH A 11 511 24 HOH HOH . 
F 6 HOH A 12 512 52 HOH HOH . 
F 6 HOH A 13 513 83 HOH HOH . 
F 6 HOH A 14 514 81 HOH HOH . 
F 6 HOH A 15 515 75 HOH HOH . 
F 6 HOH A 16 516 55 HOH HOH . 
F 6 HOH A 17 517 60 HOH HOH . 
F 6 HOH A 18 518 67 HOH HOH . 
F 6 HOH A 19 519 76 HOH HOH . 
F 6 HOH A 20 520 54 HOH HOH . 
F 6 HOH A 21 521 45 HOH HOH . 
F 6 HOH A 22 522 21 HOH HOH . 
F 6 HOH A 23 523 12 HOH HOH . 
F 6 HOH A 24 524 37 HOH HOH . 
F 6 HOH A 25 525 10 HOH HOH . 
F 6 HOH A 26 526 65 HOH HOH . 
F 6 HOH A 27 527 68 HOH HOH . 
F 6 HOH A 28 528 28 HOH HOH . 
F 6 HOH A 29 529 31 HOH HOH . 
F 6 HOH A 30 530 77 HOH HOH . 
F 6 HOH A 31 531 104 HOH HOH . 
F 6 HOH A 32 532 9 HOH HOH . 
F 6 HOH A 33 533 33 HOH HOH . 
F 6 HOH A 34 534 48 HOH HOH . 
F 6 HOH A 35 535 22 HOH HOH . 
F 6 HOH A 36 536 11 HOH HOH . 
F 6 HOH A 37 537 49 HOH HOH . 
F 6 HOH A 38 538 56 HOH HOH . 
F 6 HOH A 39 539 5 HOH HOH . 
F 6 HOH A 40 540 63 HOH HOH . 
F 6 HOH A 41 541 91 HOH HOH . 
F 6 HOH A 42 542 64 HOH HOH . 
F 6 HOH A 43 543 59 HOH HOH . 
F 6 HOH A 44 544 46 HOH HOH . 
F 6 HOH A 45 545 27 HOH HOH . 
F 6 HOH A 46 546 29 HOH HOH . 
F 6 HOH A 47 547 38 HOH HOH . 
F 6 HOH A 48 548 20 HOH HOH . 
F 6 HOH A 49 549 98 HOH HOH . 
F 6 HOH A 50 550 16 HOH HOH . 
F 6 HOH A 51 551 19 HOH HOH . 
F 6 HOH A 52 552 14 HOH HOH . 
F 6 HOH A 53 553 13 HOH HOH . 
F 6 HOH A 54 554 35 HOH HOH . 
F 6 HOH A 55 555 71 HOH HOH . 
F 6 HOH A 56 556 18 HOH HOH . 
F 6 HOH A 57 557 23 HOH HOH . 
F 6 HOH A 58 558 51 HOH HOH . 
F 6 HOH A 59 559 43 HOH HOH . 
F 6 HOH A 60 560 70 HOH HOH . 
F 6 HOH A 61 561 30 HOH HOH . 
F 6 HOH A 62 562 66 HOH HOH . 
F 6 HOH A 63 563 41 HOH HOH . 
F 6 HOH A 64 564 69 HOH HOH . 
F 6 HOH A 65 565 36 HOH HOH . 
F 6 HOH A 66 566 89 HOH HOH . 
F 6 HOH A 67 567 94 HOH HOH . 
F 6 HOH A 68 568 34 HOH HOH . 
F 6 HOH A 69 569 79 HOH HOH . 
F 6 HOH A 70 570 1 HOH HOH . 
F 6 HOH A 71 571 58 HOH HOH . 
F 6 HOH A 72 572 102 HOH HOH . 
F 6 HOH A 73 573 15 HOH HOH . 
F 6 HOH A 74 574 2 HOH HOH . 
F 6 HOH A 75 575 50 HOH HOH . 
F 6 HOH A 76 576 72 HOH HOH . 
F 6 HOH A 77 577 32 HOH HOH . 
F 6 HOH A 78 578 42 HOH HOH . 
F 6 HOH A 79 579 95 HOH HOH . 
F 6 HOH A 80 580 44 HOH HOH . 
F 6 HOH A 81 581 7 HOH HOH . 
F 6 HOH A 82 582 40 HOH HOH . 
F 6 HOH A 83 583 26 HOH HOH . 
F 6 HOH A 84 584 84 HOH HOH . 
F 6 HOH A 85 585 62 HOH HOH . 
F 6 HOH A 86 586 3 HOH HOH . 
F 6 HOH A 87 587 87 HOH HOH . 
F 6 HOH A 88 588 82 HOH HOH . 
F 6 HOH A 89 589 108 HOH HOH . 
F 6 HOH A 90 590 80 HOH HOH . 
F 6 HOH A 91 591 93 HOH HOH . 
F 6 HOH A 92 592 74 HOH HOH . 
F 6 HOH A 93 593 73 HOH HOH . 
F 6 HOH A 94 594 25 HOH HOH . 
F 6 HOH A 95 595 4 HOH HOH . 
F 6 HOH A 96 596 101 HOH HOH . 
F 6 HOH A 97 597 97 HOH HOH . 
F 6 HOH A 98 598 103 HOH HOH . 
F 6 HOH A 99 599 106 HOH HOH . 
F 6 HOH A 100 600 96 HOH HOH . 
F 6 HOH A 101 601 47 HOH HOH . 
F 6 HOH A 102 602 99 HOH HOH . 
F 6 HOH A 103 603 88 HOH HOH . 
F 6 HOH A 104 604 105 HOH HOH . 
F 6 HOH A 105 605 61 HOH HOH . 
F 6 HOH A 106 606 100 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O OH2 1PE . . . B 2 6.027 -15.688 -29.392 1 51.74 ? OH2 1PE 401 A 1 
HETATM 2 C C12 1PE . . . B 2 5.461 -16.97 -29.716 1 50.29 ? C12 1PE 401 A 1 
HETATM 3 C C22 1PE . . . B 2 6.26 -17.65 -30.829 1 46.17 ? C22 1PE 401 A 1 
HETATM 4 O OH3 1PE . . . B 2 6.076 -16.965 -32.064 1 48.99 ? OH3 1PE 401 A 1 
HETATM 5 C C13 1PE . . . B 2 6.639 -16.873 -34.439 1 42.51 ? C13 1PE 401 A 1 
HETATM 6 C C23 1PE . . . B 2 6.955 -17.475 -33.07 1 51.71 ? C23 1PE 401 A 1 
HETATM 7 O OH4 1PE . . . B 2 7.281 -15.602 -34.568 1 52.98 ? OH4 1PE 401 A 1 
HETATM 8 C C14 1PE . . . B 2 7.959 -13.761 -35.994 1 46.62 ? C14 1PE 401 A 1 
HETATM 9 C C24 1PE . . . B 2 7.117 -15.03 -35.869 1 41.01 ? C24 1PE 401 A 1 
HETATM 10 O OH5 1PE . . . B 2 7.532 -12.782 -35.037 1 56.66 ? OH5 1PE 401 A 1 
HETATM 11 C C15 1PE . . . B 2 7.096 -10.413 -34.537 1 48.35 ? C15 1PE 401 A 1 
HETATM 12 C C25 1PE . . . B 2 7.519 -11.456 -35.583 1 48.39 ? C25 1PE 401 A 1 
HETATM 13 O OH6 1PE . . . B 2 5.796 -10.656 -33.972 1 47.53 ? OH6 1PE 401 A 1 
HETATM 14 C C16 1PE . . . B 2 4.113 -9.782 -32.396 1 46.35 ? C16 1PE 401 A 1 
HETATM 15 C C26 1PE . . . B 2 5.469 -9.587 -33.071 1 48.98 ? C26 1PE 401 A 1 
HETATM 16 O OH7 1PE . . . B 2 4.249 -9.629 -30.973 1 50.86 ? OH7 1PE 401 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    22 
_model_server_stats.query_time_ms           282 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           16 
#