data_5E7R # _model_server_result.job_id WQwn3_lK1KHmR6UnZOlxFg _model_server_result.datetime_utc '2024-11-14 23:25:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5e7r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 5E7R # _exptl.entry_id 5E7R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 487.382 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-chloro-N-{2-[(5-chloro-2-{[4-(4-methylpiperazin-1-yl)phenyl]amino}pyrimidin-4-yl)oxy]phenyl}acetamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5E7R _cell.length_a 58.179 _cell.length_b 134.093 _cell.length_c 149.044 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5E7R _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 148 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 174 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C30 _struct_conn.ptnr2_label_comp_id 5KW _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id 5KW _struct_conn.ptnr2_auth_seq_id 601 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.897 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C23 H24 Cl2 N6 O2' _chem_comp.formula_weight 487.382 _chem_comp.id 5KW _chem_comp.mon_nstd_flag . _chem_comp.name 2-chloro-N-{2-[(5-chloro-2-{[4-(4-methylpiperazin-1-yl)phenyl]amino}pyrimidin-4-yl)oxy]phenyl}acetamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C03 N02 5KW sing 1 n n C03 C04 5KW sing 2 n n N02 C05 5KW sing 3 n n N02 C01 5KW sing 4 n n C05 C06 5KW sing 5 n n C04 N07 5KW sing 6 n n C25 C26 5KW doub 7 n y C25 C24 5KW sing 8 n y N07 C06 5KW sing 9 n n N07 C08 5KW sing 10 n n C26 C27 5KW sing 11 n y C11 C08 5KW doub 12 n y C11 C12 5KW sing 13 n y O31 C29 5KW doub 14 n n C08 C09 5KW sing 15 n y C24 C23 5KW doub 16 n y C29 C30 5KW sing 17 n n C29 N28 5KW sing 18 n n C12 C13 5KW doub 19 n y C27 N28 5KW sing 20 n n C27 C22 5KW doub 21 n y C09 C10 5KW doub 22 n y C23 C22 5KW sing 23 n y C13 C10 5KW sing 24 n y C13 N14 5KW sing 25 n n C22 O21 5KW sing 26 n n N14 C15 5KW sing 27 n n N32 C15 5KW doub 28 n y N32 C20 5KW sing 29 n y C15 N16 5KW sing 30 n y O21 C20 5KW sing 31 n n C20 C18 5KW doub 32 n y N16 C17 5KW doub 33 n y C18 C17 5KW sing 34 n y C18 CL1 5KW sing 35 n n C01 H1 5KW sing 36 n n C01 H2 5KW sing 37 n n C01 H3 5KW sing 38 n n C03 H5 5KW sing 39 n n C03 H6 5KW sing 40 n n C04 H7 5KW sing 41 n n C04 H8 5KW sing 42 n n C05 H9 5KW sing 43 n n C05 H10 5KW sing 44 n n C06 H11 5KW sing 45 n n C06 H12 5KW sing 46 n n C09 H13 5KW sing 47 n n C10 H14 5KW sing 48 n n C11 H15 5KW sing 49 n n C12 H16 5KW sing 50 n n N14 H17 5KW sing 51 n n C17 H18 5KW sing 52 n n C23 H19 5KW sing 53 n n C24 H20 5KW sing 54 n n C25 H21 5KW sing 55 n n C26 H22 5KW sing 56 n n N28 H23 5KW sing 57 n n C30 H24 5KW sing 58 n n C30 H25 5KW sing 59 n n C30 CL2 5KW sing 60 n n # _atom_sites.entry_id 5E7R _atom_sites.fract_transf_matrix[1][1] 0.017188 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007458 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006709 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 5KW A 1 601 1 5KW TL8 . C 3 HOH A 1 701 42 HOH HOH . C 3 HOH A 2 702 4 HOH HOH . C 3 HOH A 3 703 5 HOH HOH . C 3 HOH A 4 704 23 HOH HOH . C 3 HOH A 5 705 24 HOH HOH . C 3 HOH A 6 706 12 HOH HOH . C 3 HOH A 7 707 15 HOH HOH . C 3 HOH A 8 708 14 HOH HOH . C 3 HOH A 9 709 36 HOH HOH . C 3 HOH A 10 710 50 HOH HOH . C 3 HOH A 11 711 29 HOH HOH . C 3 HOH A 12 712 9 HOH HOH . C 3 HOH A 13 713 17 HOH HOH . C 3 HOH A 14 714 8 HOH HOH . C 3 HOH A 15 715 26 HOH HOH . C 3 HOH A 16 716 34 HOH HOH . C 3 HOH A 17 717 38 HOH HOH . C 3 HOH A 18 718 1 HOH HOH . C 3 HOH A 19 719 3 HOH HOH . C 3 HOH A 20 720 11 HOH HOH . C 3 HOH A 21 721 30 HOH HOH . C 3 HOH A 22 722 6 HOH HOH . C 3 HOH A 23 723 43 HOH HOH . C 3 HOH A 24 724 48 HOH HOH . C 3 HOH A 25 725 32 HOH HOH . C 3 HOH A 26 726 22 HOH HOH . C 3 HOH A 27 727 27 HOH HOH . C 3 HOH A 28 728 20 HOH HOH . C 3 HOH A 29 729 10 HOH HOH . C 3 HOH A 30 730 19 HOH HOH . C 3 HOH A 31 731 47 HOH HOH . C 3 HOH A 32 732 33 HOH HOH . C 3 HOH A 33 733 21 HOH HOH . C 3 HOH A 34 734 45 HOH HOH . C 3 HOH A 35 735 7 HOH HOH . C 3 HOH A 36 736 18 HOH HOH . C 3 HOH A 37 737 52 HOH HOH . C 3 HOH A 38 738 2 HOH HOH . C 3 HOH A 39 739 54 HOH HOH . C 3 HOH A 40 740 49 HOH HOH . C 3 HOH A 41 741 35 HOH HOH . C 3 HOH A 42 742 25 HOH HOH . C 3 HOH A 43 743 13 HOH HOH . C 3 HOH A 44 744 16 HOH HOH . C 3 HOH A 45 745 28 HOH HOH . C 3 HOH A 46 746 39 HOH HOH . C 3 HOH A 47 747 31 HOH HOH . C 3 HOH A 48 748 46 HOH HOH . C 3 HOH A 49 749 51 HOH HOH . C 3 HOH A 50 750 41 HOH HOH . C 3 HOH A 51 751 44 HOH HOH . C 3 HOH A 52 752 53 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 5KW . . . B 2 -21.266 -51.845 -22.279 1 61.18 ? C01 5KW 601 A 1 HETATM 2 N N02 5KW . . . B 2 -20.27 -50.854 -21.934 1 58.95 ? N02 5KW 601 A 1 HETATM 3 C C03 5KW . . . B 2 -20.831 -49.645 -21.411 1 60.08 ? C03 5KW 601 A 1 HETATM 4 C C04 5KW . . . B 2 -19.787 -48.661 -20.852 1 59.61 ? C04 5KW 601 A 1 HETATM 5 C C05 5KW . . . B 2 -19.03 -51.304 -21.637 1 59.14 ? C05 5KW 601 A 1 HETATM 6 C C06 5KW . . . B 2 -18.52 -50.803 -20.555 1 57.62 ? C06 5KW 601 A 1 HETATM 7 N N07 5KW . . . B 2 -18.807 -49.538 -20.215 1 57.06 ? N07 5KW 601 A 1 HETATM 8 C C08 5KW . . . B 2 -17.768 -48.895 -19.57 1 54.46 ? C08 5KW 601 A 1 HETATM 9 C C09 5KW . . . B 2 -18.17 -47.828 -18.826 1 53.66 ? C09 5KW 601 A 1 HETATM 10 C C10 5KW . . . B 2 -17.166 -47.127 -18.13 1 54.77 ? C10 5KW 601 A 1 HETATM 11 C C11 5KW . . . B 2 -16.487 -49.401 -19.699 1 50.4 ? C11 5KW 601 A 1 HETATM 12 C C12 5KW . . . B 2 -15.497 -48.735 -18.924 1 51.7 ? C12 5KW 601 A 1 HETATM 13 C C13 5KW . . . B 2 -15.842 -47.59 -18.169 1 54.03 ? C13 5KW 601 A 1 HETATM 14 N N14 5KW . . . B 2 -14.949 -46.806 -17.388 1 53.99 ? N14 5KW 601 A 1 HETATM 15 C C15 5KW . . . B 2 -13.747 -47.209 -16.871 1 54.36 ? C15 5KW 601 A 1 HETATM 16 N N16 5KW . . . B 2 -13.147 -46.324 -16.095 1 54.42 ? N16 5KW 601 A 1 HETATM 17 C C17 5KW . . . B 2 -11.89 -46.568 -15.646 1 51.89 ? C17 5KW 601 A 1 HETATM 18 C C18 5KW . . . B 2 -11.288 -47.769 -15.786 1 55.16 ? C18 5KW 601 A 1 HETATM 19 CL CL1 5KW . . . B 2 -9.657 -48.192 -15.184 1 64.29 ? CL1 5KW 601 A 1 HETATM 20 C C20 5KW . . . B 2 -12.007 -48.618 -16.575 1 56.93 ? C20 5KW 601 A 1 HETATM 21 O O21 5KW . . . B 2 -11.339 -49.832 -16.788 1 61.53 ? O21 5KW 601 A 1 HETATM 22 C C22 5KW . . . B 2 -11.848 -50.661 -17.793 1 61.33 ? C22 5KW 601 A 1 HETATM 23 C C23 5KW . . . B 2 -13.148 -51.117 -17.764 1 61.88 ? C23 5KW 601 A 1 HETATM 24 C C24 5KW . . . B 2 -13.583 -51.968 -18.79 1 63.11 ? C24 5KW 601 A 1 HETATM 25 C C25 5KW . . . B 2 -12.688 -52.266 -19.837 1 65.21 ? C25 5KW 601 A 1 HETATM 26 C C26 5KW . . . B 2 -11.358 -51.758 -19.889 1 68.14 ? C26 5KW 601 A 1 HETATM 27 C C27 5KW . . . B 2 -10.954 -50.935 -18.842 1 64.69 ? C27 5KW 601 A 1 HETATM 28 N N28 5KW . . . B 2 -9.683 -50.362 -18.675 1 63.34 ? N28 5KW 601 A 1 HETATM 29 C C29 5KW . . . B 2 -8.51 -50.818 -19.275 1 70.2 ? C29 5KW 601 A 1 HETATM 30 C C30 5KW . . . B 2 -7.22 -50.135 -18.831 1 65.5 ? C30 5KW 601 A 1 HETATM 31 O O31 5KW . . . B 2 -8.554 -51.757 -20.135 1 70.39 ? O31 5KW 601 A 1 HETATM 32 N N32 5KW . . . B 2 -13.19 -48.377 -17.123 1 56.26 ? N32 5KW 601 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 715 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 32 #