data_5E7W # _model_server_result.job_id UpsRZqWOKv3hZpXPbO9QIQ _model_server_result.datetime_utc '2024-11-09 07:16:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5e7w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":100}' # _entry.id 5E7W # _exptl.entry_id 5E7W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5E7W _cell.length_a 81.82 _cell.length_b 81.82 _cell.length_c 33.85 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5E7W _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 11 A CYS 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf2 A SG CYS 7 A CYS 7 1_555 B SG CYS 7 B CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? disulf ? disulf3 A SG CYS 20 A CYS 20 1_555 B SG CYS 19 B CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf4 C SG CYS 6 C CYS 6 1_555 C SG CYS 11 C CYS 11 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.132 ? disulf ? disulf5 C SG CYS 6 C CYS 6 1_555 C SG CYS 11 C CYS 11 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.963 ? disulf ? disulf6 C SG CYS 7 C CYS 7 1_555 D SG CYS 7 D CYS 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf7 C SG CYS 20 C CYS 20 1_555 D SG CYS 19 D CYS 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? metalc ? metalc1 B NE2 HIS 10 B HIS 10 1_555 E ZN ZN . B ZN 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? metalc ? metalc2 B NE2 HIS 10 B HIS 10 1_555 E ZN ZN . B ZN 100 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? metalc ? metalc3 E ZN ZN . B ZN 100 1_555 F O ACT . B ACT 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? metalc ? metalc4 E ZN ZN . B ZN 100 1_555 F O ACT . B ACT 101 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? metalc ? metalc5 D NE2 HIS 10 D HIS 10 1_555 H ZN ZN . D ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? metalc ? metalc6 D NE2 HIS 10 D HIS 10 1_555 H ZN ZN . D ZN 202 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? metalc ? metalc7 H ZN ZN . D ZN 202 1_555 L O HOH . D HOH 335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? metalc ? metalc8 H ZN ZN . D ZN 202 1_555 L O HOH . D HOH 335 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5E7W _atom_sites.fract_transf_matrix[1][1] 0.012222 _atom_sites.fract_transf_matrix[1][2] 0.007056 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014113 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.029542 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ZN B 1 100 100 ZN ZN . F 4 ACT B 1 101 101 ACT ACT . G 5 POL D 1 201 201 POL POL . H 3 ZN D 1 202 100 ZN ZN . I 6 HOH A 1 101 199 HOH HOH . I 6 HOH A 2 102 130 HOH HOH . I 6 HOH A 3 103 158 HOH HOH . I 6 HOH A 4 104 31 HOH HOH . I 6 HOH A 5 105 211 HOH HOH . I 6 HOH A 6 106 137 HOH HOH . I 6 HOH A 7 107 94 HOH HOH . I 6 HOH A 8 108 4 HOH HOH . I 6 HOH A 9 109 8 HOH HOH . I 6 HOH A 10 110 48 HOH HOH . I 6 HOH A 11 111 6 HOH HOH . I 6 HOH A 12 112 49 HOH HOH . I 6 HOH A 13 113 52 HOH HOH . I 6 HOH A 14 114 160 HOH HOH . I 6 HOH A 15 115 53 HOH HOH . I 6 HOH A 16 116 75 HOH HOH . I 6 HOH A 17 117 186 HOH HOH . I 6 HOH A 18 118 140 HOH HOH . I 6 HOH A 19 119 208 HOH HOH . I 6 HOH A 20 120 65 HOH HOH . I 6 HOH A 21 121 72 HOH HOH . I 6 HOH A 22 122 63 HOH HOH . I 6 HOH A 23 123 117 HOH HOH . I 6 HOH A 24 124 64 HOH HOH . I 6 HOH A 25 125 210 HOH HOH . I 6 HOH A 26 126 182 HOH HOH . I 6 HOH A 27 127 205 HOH HOH . I 6 HOH A 28 128 88 HOH HOH . I 6 HOH A 29 129 170 HOH HOH . I 6 HOH A 30 130 106 HOH HOH . I 6 HOH A 31 131 138 HOH HOH . I 6 HOH A 32 132 169 HOH HOH . I 6 HOH A 33 133 92 HOH HOH . I 6 HOH A 34 134 89 HOH HOH . I 6 HOH A 35 135 91 HOH HOH . I 6 HOH A 36 136 68 HOH HOH . I 6 HOH A 37 137 196 HOH HOH . I 6 HOH A 38 138 150 HOH HOH . I 6 HOH A 39 139 217 HOH HOH . I 6 HOH A 40 140 35 HOH HOH . I 6 HOH A 41 141 204 HOH HOH . I 6 HOH A 42 142 216 HOH HOH . I 6 HOH A 43 143 191 HOH HOH . I 6 HOH A 44 144 60 HOH HOH . J 6 HOH B 1 201 21 HOH HOH . J 6 HOH B 2 202 105 HOH HOH . J 6 HOH B 3 203 218 HOH HOH . J 6 HOH B 4 204 54 HOH HOH . J 6 HOH B 5 205 124 HOH HOH . J 6 HOH B 6 206 73 HOH HOH . J 6 HOH B 7 207 155 HOH HOH . J 6 HOH B 8 208 161 HOH HOH . J 6 HOH B 9 209 13 HOH HOH . J 6 HOH B 10 210 103 HOH HOH . J 6 HOH B 11 211 55 HOH HOH . J 6 HOH B 12 212 36 HOH HOH . J 6 HOH B 13 213 190 HOH HOH . J 6 HOH B 14 214 42 HOH HOH . J 6 HOH B 15 215 76 HOH HOH . J 6 HOH B 16 216 10 HOH HOH . J 6 HOH B 17 217 27 HOH HOH . J 6 HOH B 18 218 185 HOH HOH . J 6 HOH B 19 219 28 HOH HOH . J 6 HOH B 20 220 41 HOH HOH . J 6 HOH B 21 221 123 HOH HOH . J 6 HOH B 22 222 9 HOH HOH . J 6 HOH B 23 223 32 HOH HOH . J 6 HOH B 24 224 157 HOH HOH . J 6 HOH B 25 225 57 HOH HOH . J 6 HOH B 26 226 3 HOH HOH . J 6 HOH B 27 227 127 HOH HOH . J 6 HOH B 28 228 14 HOH HOH . J 6 HOH B 29 229 128 HOH HOH . J 6 HOH B 30 230 26 HOH HOH . J 6 HOH B 31 231 16 HOH HOH . J 6 HOH B 32 232 80 HOH HOH . J 6 HOH B 33 233 51 HOH HOH . J 6 HOH B 34 234 82 HOH HOH . J 6 HOH B 35 235 59 HOH HOH . J 6 HOH B 36 236 25 HOH HOH . J 6 HOH B 37 237 115 HOH HOH . J 6 HOH B 38 238 81 HOH HOH . J 6 HOH B 39 239 79 HOH HOH . J 6 HOH B 40 240 40 HOH HOH . J 6 HOH B 41 241 219 HOH HOH . J 6 HOH B 42 242 96 HOH HOH . J 6 HOH B 43 243 120 HOH HOH . J 6 HOH B 44 244 147 HOH HOH . J 6 HOH B 45 245 154 HOH HOH . J 6 HOH B 46 246 95 HOH HOH . J 6 HOH B 47 247 84 HOH HOH . J 6 HOH B 48 248 109 HOH HOH . J 6 HOH B 49 249 129 HOH HOH . J 6 HOH B 50 250 159 HOH HOH . J 6 HOH B 51 251 46 HOH HOH . J 6 HOH B 52 252 126 HOH HOH . J 6 HOH B 53 253 107 HOH HOH . J 6 HOH B 54 254 175 HOH HOH . J 6 HOH B 55 255 87 HOH HOH . J 6 HOH B 56 256 197 HOH HOH . J 6 HOH B 57 257 212 HOH HOH . J 6 HOH B 58 258 148 HOH HOH . J 6 HOH B 59 259 90 HOH HOH . J 6 HOH B 60 260 171 HOH HOH . J 6 HOH B 61 261 215 HOH HOH . J 6 HOH B 62 262 98 HOH HOH . J 6 HOH B 63 263 143 HOH HOH . J 6 HOH B 64 264 181 HOH HOH . J 6 HOH B 65 265 177 HOH HOH . J 6 HOH B 66 266 149 HOH HOH . J 6 HOH B 67 267 198 HOH HOH . K 6 HOH C 1 101 195 HOH HOH . K 6 HOH C 2 102 56 HOH HOH . K 6 HOH C 3 103 47 HOH HOH . K 6 HOH C 4 104 86 HOH HOH . K 6 HOH C 5 105 77 HOH HOH . K 6 HOH C 6 106 19 HOH HOH . K 6 HOH C 7 107 111 HOH HOH . K 6 HOH C 8 108 11 HOH HOH . K 6 HOH C 9 109 24 HOH HOH . K 6 HOH C 10 110 114 HOH HOH . K 6 HOH C 11 111 125 HOH HOH . K 6 HOH C 12 112 209 HOH HOH . K 6 HOH C 13 113 5 HOH HOH . K 6 HOH C 14 114 131 HOH HOH . K 6 HOH C 15 115 67 HOH HOH . K 6 HOH C 16 116 85 HOH HOH . K 6 HOH C 17 117 18 HOH HOH . K 6 HOH C 18 118 70 HOH HOH . K 6 HOH C 19 119 43 HOH HOH . K 6 HOH C 20 120 93 HOH HOH . K 6 HOH C 21 121 112 HOH HOH . K 6 HOH C 22 122 193 HOH HOH . K 6 HOH C 23 123 173 HOH HOH . K 6 HOH C 24 124 202 HOH HOH . K 6 HOH C 25 125 194 HOH HOH . K 6 HOH C 26 126 69 HOH HOH . K 6 HOH C 27 127 119 HOH HOH . K 6 HOH C 28 128 187 HOH HOH . K 6 HOH C 29 129 71 HOH HOH . K 6 HOH C 30 130 156 HOH HOH . K 6 HOH C 31 131 122 HOH HOH . K 6 HOH C 32 132 220 HOH HOH . K 6 HOH C 33 133 152 HOH HOH . K 6 HOH C 34 134 213 HOH HOH . K 6 HOH C 35 135 183 HOH HOH . K 6 HOH C 36 136 200 HOH HOH . K 6 HOH C 37 137 203 HOH HOH . K 6 HOH C 38 138 165 HOH HOH . K 6 HOH C 39 139 45 HOH HOH . K 6 HOH C 40 140 118 HOH HOH . K 6 HOH C 41 141 145 HOH HOH . K 6 HOH C 42 142 108 HOH HOH . K 6 HOH C 43 143 174 HOH HOH . K 6 HOH C 44 144 163 HOH HOH . L 6 HOH D 1 301 7 HOH HOH . L 6 HOH D 2 302 184 HOH HOH . L 6 HOH D 3 303 214 HOH HOH . L 6 HOH D 4 304 83 HOH HOH . L 6 HOH D 5 305 206 HOH HOH . L 6 HOH D 6 306 180 HOH HOH . L 6 HOH D 7 307 29 HOH HOH . L 6 HOH D 8 308 110 HOH HOH . L 6 HOH D 9 309 179 HOH HOH . L 6 HOH D 10 310 34 HOH HOH . L 6 HOH D 11 311 153 HOH HOH . L 6 HOH D 12 312 22 HOH HOH . L 6 HOH D 13 313 20 HOH HOH . L 6 HOH D 14 314 50 HOH HOH . L 6 HOH D 15 315 78 HOH HOH . L 6 HOH D 16 316 142 HOH HOH . L 6 HOH D 17 317 61 HOH HOH . L 6 HOH D 18 318 66 HOH HOH . L 6 HOH D 19 319 33 HOH HOH . L 6 HOH D 20 320 44 HOH HOH . L 6 HOH D 21 321 17 HOH HOH . L 6 HOH D 22 322 141 HOH HOH . L 6 HOH D 23 323 2 HOH HOH . L 6 HOH D 24 324 178 HOH HOH . L 6 HOH D 25 325 37 HOH HOH . L 6 HOH D 26 326 15 HOH HOH . L 6 HOH D 27 327 144 HOH HOH . L 6 HOH D 28 328 30 HOH HOH . L 6 HOH D 29 329 201 HOH HOH . L 6 HOH D 30 330 62 HOH HOH . L 6 HOH D 31 331 58 HOH HOH . L 6 HOH D 32 332 166 HOH HOH . L 6 HOH D 33 333 104 HOH HOH . L 6 HOH D 34 334 113 HOH HOH . L 6 HOH D 35 335 1 HOH HOH . L 6 HOH D 36 336 162 HOH HOH . L 6 HOH D 37 337 135 HOH HOH . L 6 HOH D 38 338 132 HOH HOH . L 6 HOH D 39 339 192 HOH HOH . L 6 HOH D 40 340 121 HOH HOH . L 6 HOH D 41 341 167 HOH HOH . L 6 HOH D 42 342 151 HOH HOH . L 6 HOH D 43 343 146 HOH HOH . L 6 HOH D 44 344 136 HOH HOH . L 6 HOH D 45 345 189 HOH HOH . L 6 HOH D 46 346 99 HOH HOH . L 6 HOH D 47 347 188 HOH HOH . L 6 HOH D 48 348 134 HOH HOH . L 6 HOH D 49 349 133 HOH HOH . L 6 HOH D 50 350 38 HOH HOH . L 6 HOH D 51 351 12 HOH HOH . L 6 HOH D 52 352 102 HOH HOH . L 6 HOH D 53 353 74 HOH HOH . L 6 HOH D 54 354 97 HOH HOH . L 6 HOH D 55 355 172 HOH HOH . L 6 HOH D 56 356 100 HOH HOH . L 6 HOH D 57 357 116 HOH HOH . L 6 HOH D 58 358 39 HOH HOH . L 6 HOH D 59 359 101 HOH HOH . L 6 HOH D 60 360 176 HOH HOH . L 6 HOH D 61 361 207 HOH HOH . L 6 HOH D 62 362 23 HOH HOH . L 6 HOH D 63 363 168 HOH HOH . L 6 HOH D 64 364 139 HOH HOH . L 6 HOH D 65 365 164 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x 0 _atom_site.Cartn_y 0 _atom_site.Cartn_z 8.107 _atom_site.occupancy 0.33 _atom_site.B_iso_or_equiv 8.72 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 100 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 1 #