data_5E7Z
#
_model_server_result.job_id            calna1rqmh6zcyK77hDW6A 
_model_server_result.datetime_utc      '2024-11-07 04:45:47' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5e7z 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":505}' 
#
_entry.id    5E7Z 
#
_exptl.entry_id    5E7Z 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              204.225 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            TRYPTOPHAN 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            5E7Z 
_cell.length_a            206.357 
_cell.length_b            206.357 
_cell.length_c            66.941 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5E7Z 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 6_554 -x,-x+y,-z-1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 0 0 -22.313667 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 G N N 
? 5 N N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 89 A CYS 87 1_555 E MN MN . A MN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.587 ? 
metalc ? metalc2 A NE2 HIS 371 A HIS 369 1_555 E MN MN . A MN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.662 ? 
metalc ? metalc3 A OE1 GLU 413 A GLU 411 1_555 E MN MN . A MN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.701 ? 
metalc ? metalc4 A OE2 GLU 413 A GLU 411 1_555 E MN MN . A MN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
metalc ? metalc5 A OD2 ASP 443 A ASP 441 1_555 E MN MN . A MN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? 
metalc ? metalc6 B SG CYS 89 B CYS 87 1_555 K MN MN . B MN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? 
metalc ? metalc7 B NE2 HIS 371 B HIS 369 1_555 K MN MN . B MN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.559 ? 
metalc ? metalc8 B OE1 GLU 413 B GLU 411 1_555 K MN MN . B MN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.788 ? 
metalc ? metalc9 B OE2 GLU 413 B GLU 411 1_555 K MN MN . B MN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? 
metalc ? metalc10 B OD2 ASP 443 B ASP 441 1_555 K MN MN . B MN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? 
#
_chem_comp.formula           'C11 H12 N2 O2' 
_chem_comp.formula_weight    204.225 
_chem_comp.id                TRP 
_chem_comp.mon_nstd_flag     y 
_chem_comp.name              TRYPTOPHAN 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA TRP sing 374 n n 
N H TRP sing 375 n n 
N H2 TRP sing 376 n n 
CA C TRP sing 377 n n 
CA CB TRP sing 378 n n 
CA HA TRP sing 379 n n 
C O TRP doub 380 n n 
C OXT TRP sing 381 n n 
CB CG TRP sing 382 n n 
CB HB2 TRP sing 383 n n 
CB HB3 TRP sing 384 n n 
CG CD1 TRP doub 385 n y 
CG CD2 TRP sing 386 n y 
CD1 NE1 TRP sing 387 n y 
CD1 HD1 TRP sing 388 n n 
CD2 CE2 TRP doub 389 n y 
CD2 CE3 TRP sing 390 n y 
NE1 CE2 TRP sing 391 n y 
NE1 HE1 TRP sing 392 n n 
CE2 CZ2 TRP sing 393 n y 
CE3 CZ3 TRP doub 394 n y 
CE3 HE3 TRP sing 395 n n 
CZ2 CH2 TRP doub 396 n y 
CZ2 HZ2 TRP sing 397 n n 
CZ3 CH2 TRP sing 398 n y 
CZ3 HZ3 TRP sing 399 n n 
CH2 HH2 TRP sing 400 n n 
OXT HXT TRP sing 401 n n 
#
_atom_sites.entry_id                     5E7Z 
_atom_sites.fract_transf_matrix[1][1]    0.004846 
_atom_sites.fract_transf_matrix[1][2]    0.002798 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005596 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014939 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 SO4 A 1 501 501 SO4 SO4 . 
D 2 SO4 A 1 502 502 SO4 SO4 . 
E 3 MN A 1 503 503 MN MN . 
F 4 DTR A 1 504 504 DTR DTR . 
G 5 TRP A 1 505 505 TRP TRP . 
H 6 DPN A 1 506 506 DPN DPN . 
I 2 SO4 B 1 501 501 SO4 SO4 . 
J 2 SO4 B 1 502 502 SO4 SO4 . 
K 3 MN B 1 503 503 MN MN . 
L 7 GOL B 1 504 504 GOL GOL . 
M 4 DTR B 1 505 505 DTR DTR . 
N 5 TRP B 1 506 506 TRP TRP . 
O 6 DPN B 1 507 507 DPN DPN . 
P 8 HOH A 1 601 601 HOH HOH . 
P 8 HOH A 2 602 602 HOH HOH . 
P 8 HOH A 3 603 603 HOH HOH . 
P 8 HOH A 4 604 604 HOH HOH . 
P 8 HOH A 5 605 605 HOH HOH . 
P 8 HOH A 6 606 606 HOH HOH . 
P 8 HOH A 7 607 607 HOH HOH . 
P 8 HOH A 8 608 608 HOH HOH . 
P 8 HOH A 9 609 609 HOH HOH . 
P 8 HOH A 10 610 610 HOH HOH . 
P 8 HOH A 11 611 611 HOH HOH . 
P 8 HOH A 12 612 612 HOH HOH . 
P 8 HOH A 13 613 613 HOH HOH . 
P 8 HOH A 14 614 614 HOH HOH . 
P 8 HOH A 15 615 615 HOH HOH . 
P 8 HOH A 16 616 616 HOH HOH . 
P 8 HOH A 17 617 617 HOH HOH . 
P 8 HOH A 18 618 618 HOH HOH . 
P 8 HOH A 19 619 619 HOH HOH . 
P 8 HOH A 20 620 620 HOH HOH . 
P 8 HOH A 21 621 621 HOH HOH . 
P 8 HOH A 22 622 622 HOH HOH . 
P 8 HOH A 23 623 623 HOH HOH . 
P 8 HOH A 24 624 624 HOH HOH . 
P 8 HOH A 25 625 625 HOH HOH . 
P 8 HOH A 26 626 626 HOH HOH . 
P 8 HOH A 27 627 627 HOH HOH . 
P 8 HOH A 28 628 628 HOH HOH . 
P 8 HOH A 29 629 629 HOH HOH . 
P 8 HOH A 30 630 630 HOH HOH . 
P 8 HOH A 31 631 631 HOH HOH . 
P 8 HOH A 32 632 632 HOH HOH . 
P 8 HOH A 33 633 633 HOH HOH . 
P 8 HOH A 34 634 634 HOH HOH . 
P 8 HOH A 35 635 635 HOH HOH . 
P 8 HOH A 36 636 636 HOH HOH . 
P 8 HOH A 37 637 637 HOH HOH . 
P 8 HOH A 38 638 638 HOH HOH . 
P 8 HOH A 39 639 639 HOH HOH . 
P 8 HOH A 40 640 640 HOH HOH . 
P 8 HOH A 41 641 641 HOH HOH . 
P 8 HOH A 42 642 642 HOH HOH . 
P 8 HOH A 43 643 643 HOH HOH . 
P 8 HOH A 44 644 644 HOH HOH . 
P 8 HOH A 45 645 645 HOH HOH . 
P 8 HOH A 46 646 646 HOH HOH . 
P 8 HOH A 47 647 647 HOH HOH . 
P 8 HOH A 48 648 648 HOH HOH . 
P 8 HOH A 49 649 649 HOH HOH . 
P 8 HOH A 50 650 650 HOH HOH . 
P 8 HOH A 51 651 651 HOH HOH . 
P 8 HOH A 52 652 652 HOH HOH . 
P 8 HOH A 53 653 653 HOH HOH . 
P 8 HOH A 54 654 654 HOH HOH . 
P 8 HOH A 55 655 655 HOH HOH . 
P 8 HOH A 56 656 656 HOH HOH . 
P 8 HOH A 57 657 657 HOH HOH . 
P 8 HOH A 58 658 658 HOH HOH . 
P 8 HOH A 59 659 659 HOH HOH . 
P 8 HOH A 60 660 660 HOH HOH . 
P 8 HOH A 61 661 661 HOH HOH . 
P 8 HOH A 62 662 662 HOH HOH . 
P 8 HOH A 63 663 663 HOH HOH . 
P 8 HOH A 64 664 664 HOH HOH . 
P 8 HOH A 65 665 665 HOH HOH . 
P 8 HOH A 66 666 666 HOH HOH . 
P 8 HOH A 67 667 667 HOH HOH . 
P 8 HOH A 68 668 668 HOH HOH . 
P 8 HOH A 69 669 669 HOH HOH . 
Q 8 HOH B 1 601 601 HOH HOH . 
Q 8 HOH B 2 602 602 HOH HOH . 
Q 8 HOH B 3 603 603 HOH HOH . 
Q 8 HOH B 4 604 604 HOH HOH . 
Q 8 HOH B 5 605 605 HOH HOH . 
Q 8 HOH B 6 606 606 HOH HOH . 
Q 8 HOH B 7 607 607 HOH HOH . 
Q 8 HOH B 8 608 608 HOH HOH . 
Q 8 HOH B 9 609 609 HOH HOH . 
Q 8 HOH B 10 610 610 HOH HOH . 
Q 8 HOH B 11 611 611 HOH HOH . 
Q 8 HOH B 12 612 612 HOH HOH . 
Q 8 HOH B 13 613 613 HOH HOH . 
Q 8 HOH B 14 614 614 HOH HOH . 
Q 8 HOH B 15 615 615 HOH HOH . 
Q 8 HOH B 16 616 616 HOH HOH . 
Q 8 HOH B 17 617 617 HOH HOH . 
Q 8 HOH B 18 618 618 HOH HOH . 
Q 8 HOH B 19 619 619 HOH HOH . 
Q 8 HOH B 20 620 620 HOH HOH . 
Q 8 HOH B 21 621 621 HOH HOH . 
Q 8 HOH B 22 622 622 HOH HOH . 
Q 8 HOH B 23 623 623 HOH HOH . 
Q 8 HOH B 24 624 624 HOH HOH . 
Q 8 HOH B 25 625 625 HOH HOH . 
Q 8 HOH B 26 626 626 HOH HOH . 
Q 8 HOH B 27 627 627 HOH HOH . 
Q 8 HOH B 28 628 628 HOH HOH . 
Q 8 HOH B 29 629 629 HOH HOH . 
Q 8 HOH B 30 630 630 HOH HOH . 
Q 8 HOH B 31 631 631 HOH HOH . 
Q 8 HOH B 32 632 632 HOH HOH . 
Q 8 HOH B 33 633 633 HOH HOH . 
Q 8 HOH B 34 634 634 HOH HOH . 
Q 8 HOH B 35 635 635 HOH HOH . 
Q 8 HOH B 36 636 636 HOH HOH . 
Q 8 HOH B 37 637 637 HOH HOH . 
Q 8 HOH B 38 638 638 HOH HOH . 
Q 8 HOH B 39 639 639 HOH HOH . 
Q 8 HOH B 40 640 640 HOH HOH . 
Q 8 HOH B 41 641 641 HOH HOH . 
Q 8 HOH B 42 642 642 HOH HOH . 
Q 8 HOH B 43 643 643 HOH HOH . 
Q 8 HOH B 44 644 644 HOH HOH . 
Q 8 HOH B 45 645 645 HOH HOH . 
Q 8 HOH B 46 646 646 HOH HOH . 
Q 8 HOH B 47 647 647 HOH HOH . 
Q 8 HOH B 48 648 648 HOH HOH . 
Q 8 HOH B 49 649 649 HOH HOH . 
Q 8 HOH B 50 650 650 HOH HOH . 
Q 8 HOH B 51 651 651 HOH HOH . 
Q 8 HOH B 52 652 652 HOH HOH . 
Q 8 HOH B 53 653 653 HOH HOH . 
Q 8 HOH B 54 654 654 HOH HOH . 
Q 8 HOH B 55 655 655 HOH HOH . 
Q 8 HOH B 56 656 656 HOH HOH . 
Q 8 HOH B 57 657 657 HOH HOH . 
Q 8 HOH B 58 658 658 HOH HOH . 
Q 8 HOH B 59 659 659 HOH HOH . 
Q 8 HOH B 60 660 660 HOH HOH . 
Q 8 HOH B 61 661 661 HOH HOH . 
Q 8 HOH B 62 662 662 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N TRP . B . G 5 -54.92 75.851 -14.734 0.5 26.86 ? N TRP 505 A 1 
HETATM 2 C CA TRP . B . G 5 -53.788 75.071 -15.215 0.5 25.49 ? CA TRP 505 A 1 
HETATM 3 C C TRP . B . G 5 -54.196 74.134 -16.346 0.5 26.25 ? C TRP 505 A 1 
HETATM 4 O O TRP . B . G 5 -53.29 73.408 -16.858 0.5 30.81 ? O TRP 505 A 1 
HETATM 5 C CB TRP . B . G 5 -53.158 74.275 -14.071 0.5 23.97 ? CB TRP 505 A 1 
HETATM 6 C CG TRP . B . G 5 -54.106 73.337 -13.391 0.5 23.3 ? CG TRP 505 A 1 
HETATM 7 C CD1 TRP . B . G 5 -54.979 73.639 -12.389 0.5 24.27 ? CD1 TRP 505 A 1 
HETATM 8 C CD2 TRP . B . G 5 -54.271 71.939 -13.659 0.5 23.34 ? CD2 TRP 505 A 1 
HETATM 9 N NE1 TRP . B . G 5 -55.68 72.519 -12.018 0.5 23.96 ? NE1 TRP 505 A 1 
HETATM 10 C CE2 TRP . B . G 5 -55.264 71.462 -12.782 0.5 23.01 ? CE2 TRP 505 A 1 
HETATM 11 C CE3 TRP . B . G 5 -53.677 71.047 -14.555 0.5 23.6 ? CE3 TRP 505 A 1 
HETATM 12 C CZ2 TRP . B . G 5 -55.677 70.132 -12.776 0.5 23.67 ? CZ2 TRP 505 A 1 
HETATM 13 C CZ3 TRP . B . G 5 -54.088 69.728 -14.547 0.5 24.85 ? CZ3 TRP 505 A 1 
HETATM 14 C CH2 TRP . B . G 5 -55.078 69.283 -13.664 0.5 25.98 ? CH2 TRP 505 A 1 
HETATM 15 O OXT TRP . B . G 5 -55.415 74.14 -16.703 0.5 27.79 ? OXT TRP 505 A 1 
#
_model_server_stats.io_time_ms              20 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           315 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           15 
#