data_5E8V
#
_model_server_result.job_id            x9-i2mazom4i4F1sAiEMzQ 
_model_server_result.datetime_utc      '2024-11-04 22:51:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5e8v 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":601}' 
#
_entry.id    5E8V 
#
_exptl.entry_id    5E8V 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5E8V 
_cell.length_a            60.92 
_cell.length_b            76.31 
_cell.length_c            78.12 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5E8V 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     5E8V 
_atom_sites.fract_transf_matrix[1][1]    0.016415 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013104 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012801 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GOL A 1 601 1 GOL GOL . 
C 3 HOH A 1 701 46 HOH HOH . 
C 3 HOH A 2 702 33 HOH HOH . 
C 3 HOH A 3 703 145 HOH HOH . 
C 3 HOH A 4 704 73 HOH HOH . 
C 3 HOH A 5 705 71 HOH HOH . 
C 3 HOH A 6 706 34 HOH HOH . 
C 3 HOH A 7 707 15 HOH HOH . 
C 3 HOH A 8 708 117 HOH HOH . 
C 3 HOH A 9 709 38 HOH HOH . 
C 3 HOH A 10 710 126 HOH HOH . 
C 3 HOH A 11 711 115 HOH HOH . 
C 3 HOH A 12 712 70 HOH HOH . 
C 3 HOH A 13 713 105 HOH HOH . 
C 3 HOH A 14 714 104 HOH HOH . 
C 3 HOH A 15 715 52 HOH HOH . 
C 3 HOH A 16 716 107 HOH HOH . 
C 3 HOH A 17 717 60 HOH HOH . 
C 3 HOH A 18 718 28 HOH HOH . 
C 3 HOH A 19 719 174 HOH HOH . 
C 3 HOH A 20 720 88 HOH HOH . 
C 3 HOH A 21 721 82 HOH HOH . 
C 3 HOH A 22 722 63 HOH HOH . 
C 3 HOH A 23 723 37 HOH HOH . 
C 3 HOH A 24 724 184 HOH HOH . 
C 3 HOH A 25 725 26 HOH HOH . 
C 3 HOH A 26 726 76 HOH HOH . 
C 3 HOH A 27 727 180 HOH HOH . 
C 3 HOH A 28 728 178 HOH HOH . 
C 3 HOH A 29 729 83 HOH HOH . 
C 3 HOH A 30 730 85 HOH HOH . 
C 3 HOH A 31 731 172 HOH HOH . 
C 3 HOH A 32 732 35 HOH HOH . 
C 3 HOH A 33 733 84 HOH HOH . 
C 3 HOH A 34 734 188 HOH HOH . 
C 3 HOH A 35 735 163 HOH HOH . 
C 3 HOH A 36 736 62 HOH HOH . 
C 3 HOH A 37 737 181 HOH HOH . 
C 3 HOH A 38 738 59 HOH HOH . 
C 3 HOH A 39 739 10 HOH HOH . 
C 3 HOH A 40 740 2 HOH HOH . 
C 3 HOH A 41 741 44 HOH HOH . 
C 3 HOH A 42 742 166 HOH HOH . 
C 3 HOH A 43 743 142 HOH HOH . 
C 3 HOH A 44 744 101 HOH HOH . 
C 3 HOH A 45 745 134 HOH HOH . 
C 3 HOH A 46 746 81 HOH HOH . 
C 3 HOH A 47 747 9 HOH HOH . 
C 3 HOH A 48 748 39 HOH HOH . 
C 3 HOH A 49 749 123 HOH HOH . 
C 3 HOH A 50 750 80 HOH HOH . 
C 3 HOH A 51 751 23 HOH HOH . 
C 3 HOH A 52 752 68 HOH HOH . 
C 3 HOH A 53 753 6 HOH HOH . 
C 3 HOH A 54 754 25 HOH HOH . 
C 3 HOH A 55 755 24 HOH HOH . 
C 3 HOH A 56 756 129 HOH HOH . 
C 3 HOH A 57 757 74 HOH HOH . 
C 3 HOH A 58 758 32 HOH HOH . 
C 3 HOH A 59 759 7 HOH HOH . 
C 3 HOH A 60 760 61 HOH HOH . 
C 3 HOH A 61 761 113 HOH HOH . 
C 3 HOH A 62 762 29 HOH HOH . 
C 3 HOH A 63 763 42 HOH HOH . 
C 3 HOH A 64 764 118 HOH HOH . 
C 3 HOH A 65 765 3 HOH HOH . 
C 3 HOH A 66 766 11 HOH HOH . 
C 3 HOH A 67 767 12 HOH HOH . 
C 3 HOH A 68 768 148 HOH HOH . 
C 3 HOH A 69 769 77 HOH HOH . 
C 3 HOH A 70 770 20 HOH HOH . 
C 3 HOH A 71 771 140 HOH HOH . 
C 3 HOH A 72 772 86 HOH HOH . 
C 3 HOH A 73 773 173 HOH HOH . 
C 3 HOH A 74 774 55 HOH HOH . 
C 3 HOH A 75 775 64 HOH HOH . 
C 3 HOH A 76 776 4 HOH HOH . 
C 3 HOH A 77 777 40 HOH HOH . 
C 3 HOH A 78 778 125 HOH HOH . 
C 3 HOH A 79 779 45 HOH HOH . 
C 3 HOH A 80 780 8 HOH HOH . 
C 3 HOH A 81 781 127 HOH HOH . 
C 3 HOH A 82 782 100 HOH HOH . 
C 3 HOH A 83 783 93 HOH HOH . 
C 3 HOH A 84 784 99 HOH HOH . 
C 3 HOH A 85 785 96 HOH HOH . 
C 3 HOH A 86 786 57 HOH HOH . 
C 3 HOH A 87 787 121 HOH HOH . 
C 3 HOH A 88 788 30 HOH HOH . 
C 3 HOH A 89 789 92 HOH HOH . 
C 3 HOH A 90 790 157 HOH HOH . 
C 3 HOH A 91 791 22 HOH HOH . 
C 3 HOH A 92 792 102 HOH HOH . 
C 3 HOH A 93 793 41 HOH HOH . 
C 3 HOH A 94 794 1 HOH HOH . 
C 3 HOH A 95 795 56 HOH HOH . 
C 3 HOH A 96 796 21 HOH HOH . 
C 3 HOH A 97 797 160 HOH HOH . 
C 3 HOH A 98 798 153 HOH HOH . 
C 3 HOH A 99 799 78 HOH HOH . 
C 3 HOH A 100 800 54 HOH HOH . 
C 3 HOH A 101 801 48 HOH HOH . 
C 3 HOH A 102 802 138 HOH HOH . 
C 3 HOH A 103 803 13 HOH HOH . 
C 3 HOH A 104 804 159 HOH HOH . 
C 3 HOH A 105 805 36 HOH HOH . 
C 3 HOH A 106 806 31 HOH HOH . 
C 3 HOH A 107 807 128 HOH HOH . 
C 3 HOH A 108 808 51 HOH HOH . 
C 3 HOH A 109 809 171 HOH HOH . 
C 3 HOH A 110 810 89 HOH HOH . 
C 3 HOH A 111 811 182 HOH HOH . 
C 3 HOH A 112 812 97 HOH HOH . 
C 3 HOH A 113 813 49 HOH HOH . 
C 3 HOH A 114 814 67 HOH HOH . 
C 3 HOH A 115 815 146 HOH HOH . 
C 3 HOH A 116 816 120 HOH HOH . 
C 3 HOH A 117 817 14 HOH HOH . 
C 3 HOH A 118 818 43 HOH HOH . 
C 3 HOH A 119 819 72 HOH HOH . 
C 3 HOH A 120 820 161 HOH HOH . 
C 3 HOH A 121 821 16 HOH HOH . 
C 3 HOH A 122 822 5 HOH HOH . 
C 3 HOH A 123 823 69 HOH HOH . 
C 3 HOH A 124 824 111 HOH HOH . 
C 3 HOH A 125 825 95 HOH HOH . 
C 3 HOH A 126 826 94 HOH HOH . 
C 3 HOH A 127 827 133 HOH HOH . 
C 3 HOH A 128 828 18 HOH HOH . 
C 3 HOH A 129 829 58 HOH HOH . 
C 3 HOH A 130 830 144 HOH HOH . 
C 3 HOH A 131 831 66 HOH HOH . 
C 3 HOH A 132 832 50 HOH HOH . 
C 3 HOH A 133 833 53 HOH HOH . 
C 3 HOH A 134 834 90 HOH HOH . 
C 3 HOH A 135 835 168 HOH HOH . 
C 3 HOH A 136 836 177 HOH HOH . 
C 3 HOH A 137 837 75 HOH HOH . 
C 3 HOH A 138 838 87 HOH HOH . 
C 3 HOH A 139 839 119 HOH HOH . 
C 3 HOH A 140 840 116 HOH HOH . 
C 3 HOH A 141 841 106 HOH HOH . 
C 3 HOH A 142 842 170 HOH HOH . 
C 3 HOH A 143 843 136 HOH HOH . 
C 3 HOH A 144 844 65 HOH HOH . 
C 3 HOH A 145 845 79 HOH HOH . 
C 3 HOH A 146 846 47 HOH HOH . 
C 3 HOH A 147 847 179 HOH HOH . 
C 3 HOH A 148 848 27 HOH HOH . 
C 3 HOH A 149 849 17 HOH HOH . 
C 3 HOH A 150 850 152 HOH HOH . 
C 3 HOH A 151 851 169 HOH HOH . 
C 3 HOH A 152 852 135 HOH HOH . 
C 3 HOH A 153 853 103 HOH HOH . 
C 3 HOH A 154 854 155 HOH HOH . 
C 3 HOH A 155 855 147 HOH HOH . 
C 3 HOH A 156 856 91 HOH HOH . 
C 3 HOH A 157 857 139 HOH HOH . 
C 3 HOH A 158 858 158 HOH HOH . 
C 3 HOH A 159 859 130 HOH HOH . 
C 3 HOH A 160 860 141 HOH HOH . 
C 3 HOH A 161 861 143 HOH HOH . 
C 3 HOH A 162 862 165 HOH HOH . 
C 3 HOH A 163 863 19 HOH HOH . 
C 3 HOH A 164 864 124 HOH HOH . 
C 3 HOH A 165 865 185 HOH HOH . 
C 3 HOH A 166 866 137 HOH HOH . 
C 3 HOH A 167 867 98 HOH HOH . 
C 3 HOH A 168 868 175 HOH HOH . 
C 3 HOH A 169 869 156 HOH HOH . 
C 3 HOH A 170 870 149 HOH HOH . 
C 3 HOH A 171 871 164 HOH HOH . 
C 3 HOH A 172 872 162 HOH HOH . 
C 3 HOH A 173 873 132 HOH HOH . 
C 3 HOH A 174 874 122 HOH HOH . 
C 3 HOH A 175 875 151 HOH HOH . 
C 3 HOH A 176 876 114 HOH HOH . 
C 3 HOH A 177 877 154 HOH HOH . 
C 3 HOH A 178 878 109 HOH HOH . 
C 3 HOH A 179 879 110 HOH HOH . 
C 3 HOH A 180 880 186 HOH HOH . 
C 3 HOH A 181 881 131 HOH HOH . 
C 3 HOH A 182 882 167 HOH HOH . 
C 3 HOH A 183 883 187 HOH HOH . 
C 3 HOH A 184 884 150 HOH HOH . 
C 3 HOH A 185 885 108 HOH HOH . 
C 3 HOH A 186 886 183 HOH HOH . 
C 3 HOH A 187 887 112 HOH HOH . 
C 3 HOH A 188 888 176 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . B 2 24.967 26.361 16.694 1 49.29 ? C1 GOL 601 A 1 
HETATM 2 O O1 GOL . . . B 2 24.144 26.095 15.58 1 52.39 ? O1 GOL 601 A 1 
HETATM 3 C C2 GOL . . . B 2 26.358 25.81 16.484 1 48.96 ? C2 GOL 601 A 1 
HETATM 4 O O2 GOL . . . B 2 26.946 26.392 15.312 1 52.46 ? O2 GOL 601 A 1 
HETATM 5 C C3 GOL . . . B 2 27.211 26.124 17.691 1 42.96 ? C3 GOL 601 A 1 
HETATM 6 O O3 GOL . . . B 2 26.436 26.055 18.879 1 34.48 ? O3 GOL 601 A 1 
#
_model_server_stats.io_time_ms              44 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           283 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           6 
#