data_5E90 # _model_server_result.job_id qNwv57OD49m1j7jM4NRIqw _model_server_result.datetime_utc '2024-11-28 10:31:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5e90 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 5E90 # _exptl.entry_id 5E90 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 420.464 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-amino-6-[4-(2-hydroxyethyl)phenyl]-N-[4-(morpholin-4-yl)pyridin-3-yl]pyrazine-2-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5E90 _cell.length_a 42.17 _cell.length_b 76.78 _cell.length_c 91.37 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5E90 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C22 H24 N6 O3' _chem_comp.formula_weight 420.464 _chem_comp.id 5L4 _chem_comp.mon_nstd_flag . _chem_comp.name 3-amino-6-[4-(2-hydroxyethyl)phenyl]-N-[4-(morpholin-4-yl)pyridin-3-yl]pyrazine-2-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O25 C24 5L4 sing 1 n n C24 C17 5L4 sing 2 n n C17 C14 5L4 sing 3 n n C14 C15 5L4 doub 4 n y C14 C13 5L4 sing 5 n y C15 C16 5L4 sing 6 n y C13 C12 5L4 doub 7 n y C16 C11 5L4 doub 8 n y C12 C11 5L4 sing 9 n y C30 O29 5L4 sing 10 n n C30 C31 5L4 sing 11 n n C11 C2 5L4 sing 12 n n O29 C28 5L4 sing 13 n n C31 N26 5L4 sing 14 n n C28 C27 5L4 sing 15 n n C2 C1 5L4 doub 16 n y C2 N3 5L4 sing 17 n y C1 N6 5L4 sing 18 n y N3 C4 5L4 doub 19 n y N26 C27 5L4 sing 20 n n N26 C23 5L4 sing 21 n n N6 C5 5L4 doub 22 n y C23 C22 5L4 doub 23 n y C23 C18 5L4 sing 24 n y C4 C5 5L4 sing 25 n y C4 C8 5L4 sing 26 n n N10 C18 5L4 sing 27 n n N10 C8 5L4 sing 28 n n C22 C21 5L4 sing 29 n y C5 N7 5L4 sing 30 n n C18 C19 5L4 doub 31 n y C8 O9 5L4 doub 32 n n C21 N20 5L4 doub 33 n y C19 N20 5L4 sing 34 n y C13 H37 5L4 sing 35 n n C17 H41 5L4 sing 36 n n C17 H40 5L4 sing 37 n n C16 H39 5L4 sing 38 n n C15 H38 5L4 sing 39 n n C19 H42 5L4 sing 40 n n C21 H43 5L4 sing 41 n n C22 H44 5L4 sing 42 n n C24 H45 5L4 sing 43 n n C24 H46 5L4 sing 44 n n C12 H36 5L4 sing 45 n n C27 H49 5L4 sing 46 n n C27 H48 5L4 sing 47 n n C1 H32 5L4 sing 48 n n N7 H34 5L4 sing 49 n n N7 H33 5L4 sing 50 n n N10 H35 5L4 sing 51 n n O25 H47 5L4 sing 52 n n C28 H50 5L4 sing 53 n n C28 H51 5L4 sing 54 n n C30 H53 5L4 sing 55 n n C30 H52 5L4 sing 56 n n C31 H55 5L4 sing 57 n n C31 H54 5L4 sing 58 n n # _atom_sites.entry_id 5E90 _atom_sites.fract_transf_matrix[1][1] 0.023714 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013024 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010945 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 5L4 A 1 601 1 5L4 LG1 . C 3 HOH A 1 701 18 HOH HOH . C 3 HOH A 2 702 52 HOH HOH . C 3 HOH A 3 703 120 HOH HOH . C 3 HOH A 4 704 43 HOH HOH . C 3 HOH A 5 705 89 HOH HOH . C 3 HOH A 6 706 35 HOH HOH . C 3 HOH A 7 707 70 HOH HOH . C 3 HOH A 8 708 2 HOH HOH . C 3 HOH A 9 709 34 HOH HOH . C 3 HOH A 10 710 51 HOH HOH . C 3 HOH A 11 711 59 HOH HOH . C 3 HOH A 12 712 12 HOH HOH . C 3 HOH A 13 713 29 HOH HOH . C 3 HOH A 14 714 3 HOH HOH . C 3 HOH A 15 715 37 HOH HOH . C 3 HOH A 16 716 98 HOH HOH . C 3 HOH A 17 717 44 HOH HOH . C 3 HOH A 18 718 5 HOH HOH . C 3 HOH A 19 719 57 HOH HOH . C 3 HOH A 20 720 128 HOH HOH . C 3 HOH A 21 721 23 HOH HOH . C 3 HOH A 22 722 157 HOH HOH . C 3 HOH A 23 723 38 HOH HOH . C 3 HOH A 24 724 58 HOH HOH . C 3 HOH A 25 725 131 HOH HOH . C 3 HOH A 26 726 82 HOH HOH . C 3 HOH A 27 727 67 HOH HOH . C 3 HOH A 28 728 50 HOH HOH . C 3 HOH A 29 729 97 HOH HOH . C 3 HOH A 30 730 68 HOH HOH . C 3 HOH A 31 731 45 HOH HOH . C 3 HOH A 32 732 60 HOH HOH . C 3 HOH A 33 733 151 HOH HOH . C 3 HOH A 34 734 71 HOH HOH . C 3 HOH A 35 735 144 HOH HOH . C 3 HOH A 36 736 90 HOH HOH . C 3 HOH A 37 737 49 HOH HOH . C 3 HOH A 38 738 24 HOH HOH . C 3 HOH A 39 739 72 HOH HOH . C 3 HOH A 40 740 81 HOH HOH . C 3 HOH A 41 741 80 HOH HOH . C 3 HOH A 42 742 53 HOH HOH . C 3 HOH A 43 743 55 HOH HOH . C 3 HOH A 44 744 103 HOH HOH . C 3 HOH A 45 745 107 HOH HOH . C 3 HOH A 46 746 112 HOH HOH . C 3 HOH A 47 747 8 HOH HOH . C 3 HOH A 48 748 14 HOH HOH . C 3 HOH A 49 749 86 HOH HOH . C 3 HOH A 50 750 147 HOH HOH . C 3 HOH A 51 751 28 HOH HOH . C 3 HOH A 52 752 26 HOH HOH . C 3 HOH A 53 753 56 HOH HOH . C 3 HOH A 54 754 149 HOH HOH . C 3 HOH A 55 755 161 HOH HOH . C 3 HOH A 56 756 22 HOH HOH . C 3 HOH A 57 757 7 HOH HOH . C 3 HOH A 58 758 83 HOH HOH . C 3 HOH A 59 759 85 HOH HOH . C 3 HOH A 60 760 20 HOH HOH . C 3 HOH A 61 761 10 HOH HOH . C 3 HOH A 62 762 84 HOH HOH . C 3 HOH A 63 763 21 HOH HOH . C 3 HOH A 64 764 141 HOH HOH . C 3 HOH A 65 765 27 HOH HOH . C 3 HOH A 66 766 135 HOH HOH . C 3 HOH A 67 767 17 HOH HOH . C 3 HOH A 68 768 138 HOH HOH . C 3 HOH A 69 769 148 HOH HOH . C 3 HOH A 70 770 62 HOH HOH . C 3 HOH A 71 771 94 HOH HOH . C 3 HOH A 72 772 25 HOH HOH . C 3 HOH A 73 773 155 HOH HOH . C 3 HOH A 74 774 140 HOH HOH . C 3 HOH A 75 775 36 HOH HOH . C 3 HOH A 76 776 95 HOH HOH . C 3 HOH A 77 777 119 HOH HOH . C 3 HOH A 78 778 64 HOH HOH . C 3 HOH A 79 779 150 HOH HOH . C 3 HOH A 80 780 32 HOH HOH . C 3 HOH A 81 781 91 HOH HOH . C 3 HOH A 82 782 48 HOH HOH . C 3 HOH A 83 783 42 HOH HOH . C 3 HOH A 84 784 116 HOH HOH . C 3 HOH A 85 785 41 HOH HOH . C 3 HOH A 86 786 73 HOH HOH . C 3 HOH A 87 787 108 HOH HOH . C 3 HOH A 88 788 30 HOH HOH . C 3 HOH A 89 789 11 HOH HOH . C 3 HOH A 90 790 16 HOH HOH . C 3 HOH A 91 791 76 HOH HOH . C 3 HOH A 92 792 136 HOH HOH . C 3 HOH A 93 793 106 HOH HOH . C 3 HOH A 94 794 13 HOH HOH . C 3 HOH A 95 795 96 HOH HOH . C 3 HOH A 96 796 110 HOH HOH . C 3 HOH A 97 797 154 HOH HOH . C 3 HOH A 98 798 78 HOH HOH . C 3 HOH A 99 799 142 HOH HOH . C 3 HOH A 100 800 74 HOH HOH . C 3 HOH A 101 801 39 HOH HOH . C 3 HOH A 102 802 54 HOH HOH . C 3 HOH A 103 803 79 HOH HOH . C 3 HOH A 104 804 117 HOH HOH . C 3 HOH A 105 805 65 HOH HOH . C 3 HOH A 106 806 109 HOH HOH . C 3 HOH A 107 807 66 HOH HOH . C 3 HOH A 108 808 6 HOH HOH . C 3 HOH A 109 809 69 HOH HOH . C 3 HOH A 110 810 33 HOH HOH . C 3 HOH A 111 811 4 HOH HOH . C 3 HOH A 112 812 118 HOH HOH . C 3 HOH A 113 813 137 HOH HOH . C 3 HOH A 114 814 1 HOH HOH . C 3 HOH A 115 815 75 HOH HOH . C 3 HOH A 116 816 114 HOH HOH . C 3 HOH A 117 817 61 HOH HOH . C 3 HOH A 118 818 63 HOH HOH . C 3 HOH A 119 819 87 HOH HOH . C 3 HOH A 120 820 9 HOH HOH . C 3 HOH A 121 821 15 HOH HOH . C 3 HOH A 122 822 159 HOH HOH . C 3 HOH A 123 823 127 HOH HOH . C 3 HOH A 124 824 125 HOH HOH . C 3 HOH A 125 825 19 HOH HOH . C 3 HOH A 126 826 152 HOH HOH . C 3 HOH A 127 827 47 HOH HOH . C 3 HOH A 128 828 105 HOH HOH . C 3 HOH A 129 829 40 HOH HOH . C 3 HOH A 130 830 46 HOH HOH . C 3 HOH A 131 831 99 HOH HOH . C 3 HOH A 132 832 132 HOH HOH . C 3 HOH A 133 833 153 HOH HOH . C 3 HOH A 134 834 113 HOH HOH . C 3 HOH A 135 835 100 HOH HOH . C 3 HOH A 136 836 31 HOH HOH . C 3 HOH A 137 837 133 HOH HOH . C 3 HOH A 138 838 130 HOH HOH . C 3 HOH A 139 839 129 HOH HOH . C 3 HOH A 140 840 77 HOH HOH . C 3 HOH A 141 841 88 HOH HOH . C 3 HOH A 142 842 121 HOH HOH . C 3 HOH A 143 843 123 HOH HOH . C 3 HOH A 144 844 101 HOH HOH . C 3 HOH A 145 845 145 HOH HOH . C 3 HOH A 146 846 104 HOH HOH . C 3 HOH A 147 847 111 HOH HOH . C 3 HOH A 148 848 156 HOH HOH . C 3 HOH A 149 849 143 HOH HOH . C 3 HOH A 150 850 158 HOH HOH . C 3 HOH A 151 851 126 HOH HOH . C 3 HOH A 152 852 92 HOH HOH . C 3 HOH A 153 853 124 HOH HOH . C 3 HOH A 154 854 139 HOH HOH . C 3 HOH A 155 855 122 HOH HOH . C 3 HOH A 156 856 102 HOH HOH . C 3 HOH A 157 857 115 HOH HOH . C 3 HOH A 158 858 146 HOH HOH . C 3 HOH A 159 859 160 HOH HOH . C 3 HOH A 160 860 93 HOH HOH . C 3 HOH A 161 861 134 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C13 5L4 . . . B 2 -1.991 6.758 4.79 1 26.06 ? C13 5L4 601 A 1 HETATM 2 C C18 5L4 . . . B 2 3.783 8.513 7.441 1 20.32 ? C18 5L4 601 A 1 HETATM 3 C C17 5L4 . . . B 2 -4.123 5.461 4.421 1 35.85 ? C17 5L4 601 A 1 HETATM 4 C C16 5L4 . . . B 2 -0.975 5.964 2.354 1 20.65 ? C16 5L4 601 A 1 HETATM 5 C C15 5L4 . . . B 2 -2.285 5.645 2.709 1 22.54 ? C15 5L4 601 A 1 HETATM 6 C C19 5L4 . . . B 2 5.036 9.081 7.735 1 19.42 ? C19 5L4 601 A 1 HETATM 7 C C21 5L4 . . . B 2 4.522 9.282 9.964 1 22.99 ? C21 5L4 601 A 1 HETATM 8 C C22 5L4 . . . B 2 3.275 8.701 9.804 1 21.17 ? C22 5L4 601 A 1 HETATM 9 C C23 5L4 . . . B 2 2.898 8.297 8.516 1 21.95 ? C23 5L4 601 A 1 HETATM 10 C C24 5L4 . . . B 2 -5.29 6.374 4.114 1 41.52 ? C24 5L4 601 A 1 HETATM 11 C C11 5L4 . . . B 2 -0.143 6.683 3.221 1 18.55 ? C11 5L4 601 A 1 HETATM 12 C C12 5L4 . . . B 2 -0.702 7.116 4.425 1 23.02 ? C12 5L4 601 A 1 HETATM 13 C C27 5L4 . . . B 2 0.536 7.883 9.147 1 22.58 ? C27 5L4 601 A 1 HETATM 14 C C1 5L4 . . . B 2 1.897 6.637 1.684 1 17.6 ? C1 5L4 601 A 1 HETATM 15 C C2 5L4 . . . B 2 1.304 6.887 2.937 1 18.3 ? C2 5L4 601 A 1 HETATM 16 N N3 5L4 . . . B 2 2.062 7.32 3.967 1 19.04 ? N3 5L4 601 A 1 HETATM 17 C C4 5L4 . . . B 2 3.386 7.51 3.777 1 19.04 ? C4 5L4 601 A 1 HETATM 18 C C5 5L4 . . . B 2 3.976 7.254 2.49 1 17.07 ? C5 5L4 601 A 1 HETATM 19 N N6 5L4 . . . B 2 3.204 6.81 1.47 1 16.32 ? N6 5L4 601 A 1 HETATM 20 N N7 5L4 . . . B 2 5.264 7.473 2.231 1 18.01 ? N7 5L4 601 A 1 HETATM 21 C C8 5L4 . . . B 2 4.148 7.963 4.996 1 17.64 ? C8 5L4 601 A 1 HETATM 22 O O9 5L4 . . . B 2 5.356 8.14 4.947 1 18.63 ? O9 5L4 601 A 1 HETATM 23 N N10 5L4 . . . B 2 3.412 8.101 6.126 1 16.45 ? N10 5L4 601 A 1 HETATM 24 C C14 5L4 . . . B 2 -2.793 5.996 3.946 1 28.21 ? C14 5L4 601 A 1 HETATM 25 N N20 5L4 . . . B 2 5.399 9.462 8.965 1 21.46 ? N20 5L4 601 A 1 HETATM 26 O O25 5L4 . . . B 2 -6.492 5.83 4.625 1 47.61 ? O25 5L4 601 A 1 HETATM 27 N N26 5L4 . . . B 2 1.688 7.585 8.292 1 24.18 ? N26 5L4 601 A 1 HETATM 28 C C28 5L4 . . . B 2 -0.719 7.398 8.468 1 24.24 ? C28 5L4 601 A 1 HETATM 29 O O29 5L4 . . . B 2 -0.648 5.989 8.193 1 26.94 ? O29 5L4 601 A 1 HETATM 30 C C30 5L4 . . . B 2 0.525 5.641 7.402 1 25.75 ? C30 5L4 601 A 1 HETATM 31 C C31 5L4 . . . B 2 1.802 6.145 8.032 1 25.59 ? C31 5L4 601 A 1 HETATM 32 H H37 5L4 . . . B 2 -2.349 7.048 5.777 0 26.15 ? H37 5L4 601 A 1 HETATM 33 H H41 5L4 . . . B 2 -4.281 4.477 3.984 0 35.91 ? H41 5L4 601 A 1 HETATM 34 H H40 5L4 . . . B 2 -4.088 5.275 5.494 0 35.91 ? H40 5L4 601 A 1 HETATM 35 H H39 5L4 . . . B 2 -0.62 5.643 1.377 0 20.71 ? H39 5L4 601 A 1 HETATM 36 H H38 5L4 . . . B 2 -2.909 5.112 1.995 0 22.59 ? H38 5L4 601 A 1 HETATM 37 H H42 5L4 . . . B 2 5.831 9.26 7.014 0 19.52 ? H42 5L4 601 A 1 HETATM 38 H H43 5L4 . . . B 2 4.858 9.633 10.939 0 23.1 ? H43 5L4 601 A 1 HETATM 39 H H44 5L4 . . . B 2 2.632 8.564 10.671 0 21.25 ? H44 5L4 601 A 1 HETATM 40 H H45 5L4 . . . B 2 -5.107 7.377 4.492 0 41.59 ? H45 5L4 601 A 1 HETATM 41 H H46 5L4 . . . B 2 -5.437 6.473 3.04 0 41.59 ? H46 5L4 601 A 1 HETATM 42 H H36 5L4 . . . B 2 -0.15 7.788 5.08 0 23.09 ? H36 5L4 601 A 1 HETATM 43 H H49 5L4 . . . B 2 0.486 8.959 9.31 0 22.65 ? H49 5L4 601 A 1 HETATM 44 H H48 5L4 . . . B 2 0.617 7.449 10.143 0 22.65 ? H48 5L4 601 A 1 HETATM 45 H H32 5L4 . . . B 2 1.344 6.315 0.804 0 17.69 ? H32 5L4 601 A 1 HETATM 46 H H34 5L4 . . . B 2 5.648 7.263 1.315 0 18.09 ? H34 5L4 601 A 1 HETATM 47 H H33 5L4 . . . B 2 5.896 7.86 2.922 0 18.09 ? H33 5L4 601 A 1 HETATM 48 H H35 5L4 . . . B 2 2.415 7.944 6.02 0 16.51 ? H35 5L4 601 A 1 HETATM 49 H H47 5L4 . . . B 2 -6.689 5.005 4.108 0 47.7 ? H47 5L4 601 A 1 HETATM 50 H H50 5L4 . . . B 2 -1.585 7.502 9.119 0 24.34 ? H50 5L4 601 A 1 HETATM 51 H H51 5L4 . . . B 2 -0.94 7.97 7.569 0 24.34 ? H51 5L4 601 A 1 HETATM 52 H H53 5L4 . . . B 2 0.437 5.975 6.371 0 25.84 ? H53 5L4 601 A 1 HETATM 53 H H52 5L4 . . . B 2 0.496 4.555 7.36 0 25.84 ? H52 5L4 601 A 1 HETATM 54 H H55 5L4 . . . B 2 2.643 5.943 7.372 0 25.68 ? H55 5L4 601 A 1 HETATM 55 H H54 5L4 . . . B 2 2.008 5.571 8.933 0 25.68 ? H54 5L4 601 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 55 #