data_5E9V # _model_server_result.job_id MD0DZQ4fOsyrq_uZaiC87w _model_server_result.datetime_utc '2024-11-23 11:15:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5e9v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 5E9V # _exptl.entry_id 5E9V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 360.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[1-(imidazo[1,2-a]pyridin-5-yl)-7-(morpholin-4-yl)indolizin-3-yl]ethanone _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.17 _cell.angle_gamma 90 _cell.entry_id 5E9V _cell.length_a 58.381 _cell.length_b 37.96 _cell.length_c 60.551 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5E9V _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C21 H20 N4 O2' _chem_comp.formula_weight 360.409 _chem_comp.id 5L0 _chem_comp.mon_nstd_flag . _chem_comp.name 1-[1-(imidazo[1,2-a]pyridin-5-yl)-7-(morpholin-4-yl)indolizin-3-yl]ethanone _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag NAP CAW 5L0 doub 1 n y NAP CAD 5L0 sing 2 n y CAG CAW 5L0 sing 3 n y CAG CAC 5L0 doub 4 n y CAW NAZ 5L0 sing 5 n y CAD CAH 5L0 doub 6 n y CAC CAE 5L0 sing 7 n y CAH NAZ 5L0 sing 8 n y NAZ CAV 5L0 sing 9 n y CAE CAV 5L0 doub 10 n y CAV CAT 5L0 sing 11 n n CAJ CAT 5L0 sing 12 n y CAJ CAU 5L0 doub 13 n y CAT CAX 5L0 doub 14 n y CAA CAR 5L0 sing 15 n n CAU CAR 5L0 sing 16 n n CAU NBA 5L0 sing 17 n y CAX CAK 5L0 sing 18 n y CAX NBA 5L0 sing 19 n y CAR OAB 5L0 doub 20 n n CAK CAS 5L0 doub 21 n y NBA CAI 5L0 sing 22 n y CAO NAY 5L0 sing 23 n n CAO CAM 5L0 sing 24 n n CAS NAY 5L0 sing 25 n n CAS CAF 5L0 sing 26 n y CAI CAF 5L0 doub 27 n y NAY CAN 5L0 sing 28 n n CAM OAQ 5L0 sing 29 n n OAQ CAL 5L0 sing 30 n n CAN CAL 5L0 sing 31 n n CAN H1 5L0 sing 32 n n CAN H2 5L0 sing 33 n n CAL H3 5L0 sing 34 n n CAL H4 5L0 sing 35 n n CAM H5 5L0 sing 36 n n CAM H6 5L0 sing 37 n n CAO H7 5L0 sing 38 n n CAO H8 5L0 sing 39 n n CAK H9 5L0 sing 40 n n CAF H10 5L0 sing 41 n n CAI H11 5L0 sing 42 n n CAA H12 5L0 sing 43 n n CAA H13 5L0 sing 44 n n CAA H14 5L0 sing 45 n n CAJ H15 5L0 sing 46 n n CAH H16 5L0 sing 47 n n CAD H17 5L0 sing 48 n n CAG H18 5L0 sing 49 n n CAC H19 5L0 sing 50 n n CAE H20 5L0 sing 51 n n # _atom_sites.entry_id 5E9V _atom_sites.fract_transf_matrix[1][1] 0.017129 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004967 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.026344 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017195 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 5L0 A 1 301 2 5L0 DRG . D 3 EDO A 1 302 2 EDO EDO . E 2 5L0 B 1 301 1 5L0 DRG . F 3 EDO B 1 302 1 EDO EDO . G 4 HOH A 1 401 19 HOH HOH . G 4 HOH A 2 402 91 HOH HOH . G 4 HOH A 3 403 50 HOH HOH . G 4 HOH A 4 404 84 HOH HOH . G 4 HOH A 5 405 14 HOH HOH . G 4 HOH A 6 406 51 HOH HOH . G 4 HOH A 7 407 69 HOH HOH . G 4 HOH A 8 408 62 HOH HOH . G 4 HOH A 9 409 61 HOH HOH . G 4 HOH A 10 410 100 HOH HOH . G 4 HOH A 11 411 81 HOH HOH . G 4 HOH A 12 412 101 HOH HOH . G 4 HOH A 13 413 71 HOH HOH . G 4 HOH A 14 414 57 HOH HOH . G 4 HOH A 15 415 63 HOH HOH . G 4 HOH A 16 416 17 HOH HOH . G 4 HOH A 17 417 59 HOH HOH . G 4 HOH A 18 418 45 HOH HOH . G 4 HOH A 19 419 95 HOH HOH . G 4 HOH A 20 420 130 HOH HOH . G 4 HOH A 21 421 78 HOH HOH . G 4 HOH A 22 422 15 HOH HOH . G 4 HOH A 23 423 106 HOH HOH . G 4 HOH A 24 424 125 HOH HOH . G 4 HOH A 25 425 67 HOH HOH . G 4 HOH A 26 426 39 HOH HOH . G 4 HOH A 27 427 49 HOH HOH . G 4 HOH A 28 428 108 HOH HOH . G 4 HOH A 29 429 80 HOH HOH . G 4 HOH A 30 430 48 HOH HOH . G 4 HOH A 31 431 73 HOH HOH . G 4 HOH A 32 432 29 HOH HOH . G 4 HOH A 33 433 124 HOH HOH . G 4 HOH A 34 434 25 HOH HOH . G 4 HOH A 35 435 41 HOH HOH . G 4 HOH A 36 436 93 HOH HOH . G 4 HOH A 37 437 98 HOH HOH . G 4 HOH A 38 438 92 HOH HOH . G 4 HOH A 39 439 83 HOH HOH . G 4 HOH A 40 440 129 HOH HOH . G 4 HOH A 41 441 109 HOH HOH . G 4 HOH A 42 442 79 HOH HOH . G 4 HOH A 43 443 122 HOH HOH . G 4 HOH A 44 444 82 HOH HOH . G 4 HOH A 45 445 105 HOH HOH . G 4 HOH A 46 446 103 HOH HOH . G 4 HOH A 47 447 110 HOH HOH . G 4 HOH A 48 448 104 HOH HOH . H 4 HOH B 1 401 119 HOH HOH . H 4 HOH B 2 402 127 HOH HOH . H 4 HOH B 3 403 114 HOH HOH . H 4 HOH B 4 404 107 HOH HOH . H 4 HOH B 5 405 102 HOH HOH . H 4 HOH B 6 406 9 HOH HOH . H 4 HOH B 7 407 18 HOH HOH . H 4 HOH B 8 408 123 HOH HOH . H 4 HOH B 9 409 86 HOH HOH . H 4 HOH B 10 410 26 HOH HOH . H 4 HOH B 11 411 21 HOH HOH . H 4 HOH B 12 412 58 HOH HOH . H 4 HOH B 13 413 65 HOH HOH . H 4 HOH B 14 414 24 HOH HOH . H 4 HOH B 15 415 40 HOH HOH . H 4 HOH B 16 416 34 HOH HOH . H 4 HOH B 17 417 85 HOH HOH . H 4 HOH B 18 418 35 HOH HOH . H 4 HOH B 19 419 97 HOH HOH . H 4 HOH B 20 420 88 HOH HOH . H 4 HOH B 21 421 31 HOH HOH . H 4 HOH B 22 422 117 HOH HOH . H 4 HOH B 23 423 55 HOH HOH . H 4 HOH B 24 424 128 HOH HOH . H 4 HOH B 25 425 5 HOH HOH . H 4 HOH B 26 426 37 HOH HOH . H 4 HOH B 27 427 12 HOH HOH . H 4 HOH B 28 428 2 HOH HOH . H 4 HOH B 29 429 3 HOH HOH . H 4 HOH B 30 430 30 HOH HOH . H 4 HOH B 31 431 36 HOH HOH . H 4 HOH B 32 432 16 HOH HOH . H 4 HOH B 33 433 38 HOH HOH . H 4 HOH B 34 434 20 HOH HOH . H 4 HOH B 35 435 56 HOH HOH . H 4 HOH B 36 436 54 HOH HOH . H 4 HOH B 37 437 10 HOH HOH . H 4 HOH B 38 438 7 HOH HOH . H 4 HOH B 39 439 96 HOH HOH . H 4 HOH B 40 440 13 HOH HOH . H 4 HOH B 41 441 23 HOH HOH . H 4 HOH B 42 442 74 HOH HOH . H 4 HOH B 43 443 60 HOH HOH . H 4 HOH B 44 444 120 HOH HOH . H 4 HOH B 45 445 6 HOH HOH . H 4 HOH B 46 446 136 HOH HOH . H 4 HOH B 47 447 22 HOH HOH . H 4 HOH B 48 448 133 HOH HOH . H 4 HOH B 49 449 42 HOH HOH . H 4 HOH B 50 450 11 HOH HOH . H 4 HOH B 51 451 43 HOH HOH . H 4 HOH B 52 452 1 HOH HOH . H 4 HOH B 53 453 46 HOH HOH . H 4 HOH B 54 454 90 HOH HOH . H 4 HOH B 55 455 112 HOH HOH . H 4 HOH B 56 456 126 HOH HOH . H 4 HOH B 57 457 72 HOH HOH . H 4 HOH B 58 458 66 HOH HOH . H 4 HOH B 59 459 33 HOH HOH . H 4 HOH B 60 460 111 HOH HOH . H 4 HOH B 61 461 32 HOH HOH . H 4 HOH B 62 462 94 HOH HOH . H 4 HOH B 63 463 28 HOH HOH . H 4 HOH B 64 464 132 HOH HOH . H 4 HOH B 65 465 70 HOH HOH . H 4 HOH B 66 466 4 HOH HOH . H 4 HOH B 67 467 53 HOH HOH . H 4 HOH B 68 468 121 HOH HOH . H 4 HOH B 69 469 52 HOH HOH . H 4 HOH B 70 470 118 HOH HOH . H 4 HOH B 71 471 76 HOH HOH . H 4 HOH B 72 472 135 HOH HOH . H 4 HOH B 73 473 89 HOH HOH . H 4 HOH B 74 474 131 HOH HOH . H 4 HOH B 75 475 75 HOH HOH . H 4 HOH B 76 476 87 HOH HOH . H 4 HOH B 77 477 64 HOH HOH . H 4 HOH B 78 478 115 HOH HOH . H 4 HOH B 79 479 47 HOH HOH . H 4 HOH B 80 480 8 HOH HOH . H 4 HOH B 81 481 68 HOH HOH . H 4 HOH B 82 482 113 HOH HOH . H 4 HOH B 83 483 134 HOH HOH . H 4 HOH B 84 484 77 HOH HOH . H 4 HOH B 85 485 99 HOH HOH . H 4 HOH B 86 486 116 HOH HOH . H 4 HOH B 87 487 27 HOH HOH . H 4 HOH B 88 488 44 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAN 5L0 . . . C 2 49.201 8.812 32.191 1 49.14 ? CAN 5L0 301 A 1 HETATM 2 C CAL 5L0 . . . C 2 49.756 8.524 33.502 1 49.53 ? CAL 5L0 301 A 1 HETATM 3 O OAQ 5L0 . . . C 2 49.065 7.341 34.013 1 50.83 ? OAQ 5L0 301 A 1 HETATM 4 C CAM 5L0 . . . C 2 49.641 6.177 33.403 1 51.67 ? CAM 5L0 301 A 1 HETATM 5 C CAO 5L0 . . . C 2 49.172 6.22 31.904 1 50.57 ? CAO 5L0 301 A 1 HETATM 6 N NAY 5L0 . . . C 2 49.057 7.6 31.319 1 46.36 ? NAY 5L0 301 A 1 HETATM 7 C CAS 5L0 . . . C 2 48.814 7.763 29.967 1 43.65 ? CAS 5L0 301 A 1 HETATM 8 C CAK 5L0 . . . C 2 48.404 6.696 29.13 1 43.8 ? CAK 5L0 301 A 1 HETATM 9 C CAX 5L0 . . . C 2 48.169 6.897 27.796 1 40.76 ? CAX 5L0 301 A 1 HETATM 10 C CAF 5L0 . . . C 2 48.963 9.022 29.366 1 38.57 ? CAF 5L0 301 A 1 HETATM 11 C CAI 5L0 . . . C 2 48.738 9.225 28.015 1 37.29 ? CAI 5L0 301 A 1 HETATM 12 N NBA 5L0 . . . C 2 48.335 8.112 27.253 1 40 ? NBA 5L0 301 A 1 HETATM 13 C CAU 5L0 . . . C 2 48.058 8.04 25.916 1 34.95 ? CAU 5L0 301 A 1 HETATM 14 C CAR 5L0 . . . C 2 48.079 9.046 25.033 1 29.99 ? CAR 5L0 301 A 1 HETATM 15 O OAB 5L0 . . . C 2 48.212 10.216 25.358 1 32.88 ? OAB 5L0 301 A 1 HETATM 16 C CAA 5L0 . . . C 2 47.846 8.729 23.533 1 33.31 ? CAA 5L0 301 A 1 HETATM 17 C CAJ 5L0 . . . C 2 47.728 6.78 25.639 1 36.26 ? CAJ 5L0 301 A 1 HETATM 18 C CAT 5L0 . . . C 2 47.787 6.091 26.792 1 42.92 ? CAT 5L0 301 A 1 HETATM 19 C CAV 5L0 . . . C 2 47.518 4.777 26.875 1 48.78 ? CAV 5L0 301 A 1 HETATM 20 N NAZ 5L0 . . . C 2 46.401 4.244 26.332 1 54.99 ? NAZ 5L0 301 A 1 HETATM 21 C CAH 5L0 . . . C 2 45.39 4.846 25.675 1 54.69 ? CAH 5L0 301 A 1 HETATM 22 C CAD 5L0 . . . C 2 44.498 3.926 25.319 1 58.2 ? CAD 5L0 301 A 1 HETATM 23 N NAP 5L0 . . . C 2 44.943 2.748 25.744 1 59.08 ? NAP 5L0 301 A 1 HETATM 24 C CAW 5L0 . . . C 2 46.111 2.935 26.368 1 58.11 ? CAW 5L0 301 A 1 HETATM 25 C CAG 5L0 . . . C 2 46.94 2.075 26.974 1 57.36 ? CAG 5L0 301 A 1 HETATM 26 C CAC 5L0 . . . C 2 48.12 2.537 27.55 1 55.14 ? CAC 5L0 301 A 1 HETATM 27 C CAE 5L0 . . . C 2 48.409 3.902 27.501 1 54.66 ? CAE 5L0 301 A 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 221 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 27 #