data_5EAB # _model_server_result.job_id Ug8Pzvj1db9CiXin3FwqXw _model_server_result.datetime_utc '2024-10-18 12:33:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5eab # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":602}' # _entry.id 5EAB # _exptl.entry_id 5EAB _exptl.method 'X-RAY DIFFRACTION' # _entity.details 'TBX is the small molecule S-tebuconazole' _entity.formula_weight 307.818 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3~{S})-1-(4-chlorophenyl)-4,4-dimethyl-3-(1,2,4-triazol-1-ylmethyl)pentan-3-ol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.5 _cell.angle_gamma 90 _cell.entry_id 5EAB _cell.length_a 80.7 _cell.length_b 67.23 _cell.length_c 81.63 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5EAB _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 470 A CYS 470 1_555 B FE HEM . A HEM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.623 ? metalc ? metalc2 B FE HEM . A HEM 601 1_555 C N24 TBX . A TBX 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? # _chem_comp.formula 'C16 H22 Cl N3 O' _chem_comp.formula_weight 307.818 _chem_comp.id TBX _chem_comp.mon_nstd_flag . _chem_comp.name (3~{S})-1-(4-chlorophenyl)-4,4-dimethyl-3-(1,2,4-triazol-1-ylmethyl)pentan-3-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms (S)-tebuconazole # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL1 C6 TBX sing 370 n n C6 C1 TBX doub 371 n y C6 C5 TBX sing 372 n y C1 C2 TBX sing 373 n y C5 C4 TBX doub 374 n y C2 C3 TBX doub 375 n y C4 C3 TBX sing 376 n y C3 C12 TBX sing 377 n n C12 C15 TBX sing 378 n n C36 C31 TBX sing 379 n n C40 C31 TBX sing 380 n n C15 C18 TBX sing 381 n n C31 C18 TBX sing 382 n n C31 C32 TBX sing 383 n n C18 C19 TBX sing 384 n n C18 O29 TBX sing 385 n n N26 C25 TBX doub 386 n y N26 N22 TBX sing 387 n y C19 N22 TBX sing 388 n n C25 N24 TBX sing 389 n y N22 C23 TBX sing 390 n y C23 N24 TBX doub 391 n y C1 H1 TBX sing 392 n n C2 H2 TBX sing 393 n n C4 H3 TBX sing 394 n n C5 H4 TBX sing 395 n n C12 H5 TBX sing 396 n n C12 H6 TBX sing 397 n n C15 H7 TBX sing 398 n n C15 H8 TBX sing 399 n n C19 H9 TBX sing 400 n n C19 H10 TBX sing 401 n n C23 H11 TBX sing 402 n n C25 H12 TBX sing 403 n n O29 H13 TBX sing 404 n n C32 H14 TBX sing 405 n n C32 H15 TBX sing 406 n n C32 H16 TBX sing 407 n n C36 H17 TBX sing 408 n n C36 H18 TBX sing 409 n n C36 H19 TBX sing 410 n n C40 H20 TBX sing 411 n n C40 H21 TBX sing 412 n n C40 H22 TBX sing 413 n n # _atom_sites.entry_id 5EAB _atom_sites.fract_transf_matrix[1][1] 0.012392 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002297 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014874 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012459 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 601 601 HEM HEM . C 3 TBX A 1 602 1 TBX TBX . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 TBX . . . C 3 11.856 8.65 92.589 1 68.15 ? C1 TBX 602 A 1 HETATM 2 C C2 TBX . . . C 3 10.812 8.878 93.477 1 77.2 ? C2 TBX 602 A 1 HETATM 3 C C3 TBX . . . C 3 10.624 10.126 94.061 1 76.75 ? C3 TBX 602 A 1 HETATM 4 C C4 TBX . . . C 3 11.533 11.13 93.778 1 74.28 ? C4 TBX 602 A 1 HETATM 5 C C5 TBX . . . C 3 12.58 10.925 92.893 1 76.91 ? C5 TBX 602 A 1 HETATM 6 C C6 TBX . . . C 3 12.721 9.685 92.319 1 75.42 ? C6 TBX 602 A 1 HETATM 7 CL CL1 TBX . . . C 3 14.113 9.385 91.316 1 81.01 ? CL1 TBX 602 A 1 HETATM 8 C C12 TBX . . . C 3 9.376 10.442 94.847 1 69.38 ? C12 TBX 602 A 1 HETATM 9 C C15 TBX . . . C 3 8.918 9.297 95.734 1 66.89 ? C15 TBX 602 A 1 HETATM 10 C C18 TBX . . . C 3 7.894 9.662 96.811 1 66.46 ? C18 TBX 602 A 1 HETATM 11 C C19 TBX . . . C 3 7.988 11.027 97.419 1 65.7 ? C19 TBX 602 A 1 HETATM 12 N N22 TBX . . . C 3 9.337 11.397 97.795 1 65.16 ? N22 TBX 602 A 1 HETATM 13 C C23 TBX . . . C 3 10.15 10.816 98.685 1 65.08 ? C23 TBX 602 A 1 HETATM 14 N N24 TBX . . . C 3 11.321 11.401 98.692 1 67.8 ? N24 TBX 602 A 1 HETATM 15 C C25 TBX . . . C 3 11.171 12.373 97.762 1 65.39 ? C25 TBX 602 A 1 HETATM 16 N N26 TBX . . . C 3 9.99 12.414 97.201 1 65.86 ? N26 TBX 602 A 1 HETATM 17 O O29 TBX . . . C 3 8.235 8.707 97.823 1 65.79 ? O29 TBX 602 A 1 HETATM 18 C C31 TBX . . . C 3 6.439 9.423 96.465 1 63.3 ? C31 TBX 602 A 1 HETATM 19 C C32 TBX . . . C 3 5.593 9.384 97.746 1 57.64 ? C32 TBX 602 A 1 HETATM 20 C C36 TBX . . . C 3 5.899 10.538 95.567 1 64.82 ? C36 TBX 602 A 1 HETATM 21 C C40 TBX . . . C 3 6.264 8.103 95.706 1 64.85 ? C40 TBX 602 A 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 21 #