data_5EAH # _model_server_result.job_id r4pTldkzYpKA-QbfvvGGBA _model_server_result.datetime_utc '2025-02-18 16:23:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5eah # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":602}' # _entry.id 5EAH # _exptl.entry_id 5EAH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 406.263 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[[(2~{S},4~{R})-2-[2-chloranyl-4-(4-chloranylphenoxy)phenyl]-4-methyl-1,3-dioxolan-2-yl]methyl]-1,2,4-triazole _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.58 _cell.angle_gamma 90 _cell.entry_id 5EAH _cell.length_a 78.02 _cell.length_b 67.33 _cell.length_c 80.9 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5EAH _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 470 A CYS 470 1_555 B FE HEM . A HEM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? metalc ? metalc2 B FE HEM . A HEM 601 1_555 C N31 5LZ . A 5LZ 602 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.151 ? metalc ? metalc3 B FE HEM . A HEM 601 1_555 D N31 5LW . A 5LW 603 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.996 ? metalc ? metalc4 B FE HEM . A HEM 601 1_555 E N31 5LX . A 5LX 604 1_555 ? ? ? ? C ? ? ? ? ? ? ? 2.014 ? metalc ? metalc5 B FE HEM . A HEM 601 1_555 F N31 5LY . A 5LY 605 1_555 ? ? ? ? D ? ? ? ? ? ? ? 2.025 ? # _chem_comp.formula 'C19 H17 Cl2 N3 O3' _chem_comp.formula_weight 406.263 _chem_comp.id 5LZ _chem_comp.mon_nstd_flag . _chem_comp.name 1-[[(2~{S},4~{R})-2-[2-chloranyl-4-(4-chloranylphenoxy)phenyl]-4-methyl-1,3-dioxolan-2-yl]methyl]-1,2,4-triazole _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Difenoconazole # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL1 C13 5LZ sing 142 n n C11 C13 5LZ doub 143 n y C11 C10 5LZ sing 144 n y C13 C14 5LZ sing 145 n y C10 C9 5LZ doub 146 n y C14 C18 5LZ doub 147 n y C9 C18 5LZ sing 148 n y C9 O8 5LZ sing 149 n n O8 C5 5LZ sing 150 n n C6 C5 5LZ doub 151 n y C6 C7 5LZ sing 152 n y C5 C4 5LZ sing 153 n y CL2 C7 5LZ sing 154 n n C7 C12 5LZ doub 155 n y C4 C3 5LZ doub 156 n y C12 C3 5LZ sing 157 n y C12 C15 5LZ sing 158 n n O17 C23 5LZ sing 159 n n O17 C15 5LZ sing 160 n n C23 C40 5LZ sing 161 n n C23 C22 5LZ sing 162 n n C15 O16 5LZ sing 163 n n C15 C25 5LZ sing 164 n n C22 O16 5LZ sing 165 n n N29 C30 5LZ doub 166 n y N29 N28 5LZ sing 167 n y C25 N28 5LZ sing 168 n n C30 N31 5LZ sing 169 n y N28 C32 5LZ sing 170 n y C32 N31 5LZ doub 171 n y C4 H1 5LZ sing 172 n n C6 H2 5LZ sing 173 n n C3 H3 5LZ sing 174 n n C10 H4 5LZ sing 175 n n C11 H5 5LZ sing 176 n n C14 H6 5LZ sing 177 n n C18 H7 5LZ sing 178 n n C22 H8 5LZ sing 179 n n C22 H9 5LZ sing 180 n n C23 H10 5LZ sing 181 n n C25 H11 5LZ sing 182 n n C25 H12 5LZ sing 183 n n C30 H13 5LZ sing 184 n n C32 H14 5LZ sing 185 n n C40 H15 5LZ sing 186 n n C40 H16 5LZ sing 187 n n C40 H17 5LZ sing 188 n n # _atom_sites.entry_id 5EAH _atom_sites.fract_transf_matrix[1][1] 0.012817 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001934 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014852 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012501 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 601 601 HEM HEM . C 3 5LZ A 1 602 1 5LZ DFC . D 4 5LW A 1 603 1 5LW DF4 . E 5 5LX A 1 604 1 5LX DF5 . F 6 5LY A 1 605 1 5LY DF6 . G 7 HOH A 1 701 5 HOH HOH . G 7 HOH A 2 702 8 HOH HOH . G 7 HOH A 3 703 11 HOH HOH . G 7 HOH A 4 704 40 HOH HOH . G 7 HOH A 5 705 19 HOH HOH . G 7 HOH A 6 706 37 HOH HOH . G 7 HOH A 7 707 24 HOH HOH . G 7 HOH A 8 708 25 HOH HOH . G 7 HOH A 9 709 6 HOH HOH . G 7 HOH A 10 710 1 HOH HOH . G 7 HOH A 11 711 28 HOH HOH . G 7 HOH A 12 712 27 HOH HOH . G 7 HOH A 13 713 20 HOH HOH . G 7 HOH A 14 714 15 HOH HOH . G 7 HOH A 15 715 3 HOH HOH . G 7 HOH A 16 716 9 HOH HOH . G 7 HOH A 17 717 2 HOH HOH . G 7 HOH A 18 718 38 HOH HOH . G 7 HOH A 19 719 10 HOH HOH . G 7 HOH A 20 720 12 HOH HOH . G 7 HOH A 21 721 4 HOH HOH . G 7 HOH A 22 722 32 HOH HOH . G 7 HOH A 23 723 7 HOH HOH . G 7 HOH A 24 724 17 HOH HOH . G 7 HOH A 25 725 13 HOH HOH . G 7 HOH A 26 726 31 HOH HOH . G 7 HOH A 27 727 21 HOH HOH . G 7 HOH A 28 728 34 HOH HOH . G 7 HOH A 29 729 16 HOH HOH . G 7 HOH A 30 730 22 HOH HOH . G 7 HOH A 31 731 29 HOH HOH . G 7 HOH A 32 732 42 HOH HOH . G 7 HOH A 33 733 30 HOH HOH . G 7 HOH A 34 734 44 HOH HOH . G 7 HOH A 35 735 23 HOH HOH . G 7 HOH A 36 736 41 HOH HOH . G 7 HOH A 37 737 39 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 5LZ . A . C 3 26.082 11.19 14.306 0.3 41.53 ? C4 5LZ 602 A 1 HETATM 2 C C5 5LZ . A . C 3 25.726 11.905 13.176 0.3 41.79 ? C5 5LZ 602 A 1 HETATM 3 C C6 5LZ . A . C 3 24.47 12.481 13.085 0.3 42.43 ? C6 5LZ 602 A 1 HETATM 4 C C3 5LZ . A . C 3 25.17 11.034 15.331 0.3 41.3 ? C3 5LZ 602 A 1 HETATM 5 C C7 5LZ . A . C 3 23.577 12.332 14.128 0.3 42.97 ? C7 5LZ 602 A 1 HETATM 6 O O8 5LZ . A . C 3 26.565 12.098 12.074 0.3 42.08 ? O8 5LZ 602 A 1 HETATM 7 C C9 5LZ . A . C 3 27.536 11.159 11.713 0.3 39.69 ? C9 5LZ 602 A 1 HETATM 8 C C10 5LZ . A . C 3 28.745 11.66 11.259 0.3 39.48 ? C10 5LZ 602 A 1 HETATM 9 C C11 5LZ . A . C 3 29.774 10.793 10.944 0.3 38.62 ? C11 5LZ 602 A 1 HETATM 10 C C12 5LZ . A . C 3 23.902 11.595 15.269 0.3 41.87 ? C12 5LZ 602 A 1 HETATM 11 C C13 5LZ . A . C 3 29.581 9.438 11.087 0.3 38.47 ? C13 5LZ 602 A 1 HETATM 12 C C14 5LZ . A . C 3 28.377 8.925 11.514 0.3 39.13 ? C14 5LZ 602 A 1 HETATM 13 C C15 5LZ . A . C 3 22.957 11.393 16.413 0.3 42.61 ? C15 5LZ 602 A 1 HETATM 14 O O16 5LZ . A . C 3 23.346 10.248 17.163 0.3 45.02 ? O16 5LZ 602 A 1 HETATM 15 O O17 5LZ . A . C 3 21.629 11.145 15.961 0.3 43.69 ? O17 5LZ 602 A 1 HETATM 16 C C18 5LZ . A . C 3 27.346 9.791 11.823 0.3 39.15 ? C18 5LZ 602 A 1 HETATM 17 CL CL1 5LZ . A . C 3 30.897 8.351 10.75 0.3 48.14 ? CL1 5LZ 602 A 1 HETATM 18 CL CL2 5LZ . A . C 3 22.049 13.134 13.98 0.3 46.31 ? CL2 5LZ 602 A 1 HETATM 19 C C22 5LZ . A . C 3 22.278 9.301 17.155 0.3 45.33 ? C22 5LZ 602 A 1 HETATM 20 C C23 5LZ . A . C 3 21.427 9.717 15.977 0.3 44.51 ? C23 5LZ 602 A 1 HETATM 21 C C25 5LZ . A . C 3 22.86 12.636 17.335 0.3 42.21 ? C25 5LZ 602 A 1 HETATM 22 N N28 5LZ . A . C 3 24.22 12.99 17.715 0.3 43.93 ? N28 5LZ 602 A 1 HETATM 23 N N29 5LZ . A . C 3 24.849 14.055 17.158 0.3 42.15 ? N29 5LZ 602 A 1 HETATM 24 C C30 5LZ . A . C 3 26.045 13.98 17.696 0.3 42.33 ? C30 5LZ 602 A 1 HETATM 25 N N31 5LZ . A . C 3 26.228 12.956 18.557 0.3 43.49 ? N31 5LZ 602 A 1 HETATM 26 C C32 5LZ . A . C 3 25.053 12.365 18.541 0.3 42.55 ? C32 5LZ 602 A 1 HETATM 27 C C40 5LZ . A . C 3 19.957 9.463 16.175 0.3 43.16 ? C40 5LZ 602 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 27 #