data_5EAH # _model_server_result.job_id 7qLY1VZDWaXqNQZj_JG3JQ _model_server_result.datetime_utc '2025-02-18 16:17:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5eah # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":603}' # _entry.id 5EAH # _exptl.entry_id 5EAH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 406.263 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[[(2~{S},4~{S})-2-[2-chloranyl-4-(4-chloranylphenoxy)phenyl]-4-methyl-1,3-dioxolan-2-yl]methyl]-1,2,4-triazole _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.58 _cell.angle_gamma 90 _cell.entry_id 5EAH _cell.length_a 78.02 _cell.length_b 67.33 _cell.length_c 80.9 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5EAH _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 470 A CYS 470 1_555 B FE HEM . A HEM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? metalc ? metalc2 B FE HEM . A HEM 601 1_555 C N31 5LZ . A 5LZ 602 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.151 ? metalc ? metalc3 B FE HEM . A HEM 601 1_555 D N31 5LW . A 5LW 603 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.996 ? metalc ? metalc4 B FE HEM . A HEM 601 1_555 E N31 5LX . A 5LX 604 1_555 ? ? ? ? C ? ? ? ? ? ? ? 2.014 ? metalc ? metalc5 B FE HEM . A HEM 601 1_555 F N31 5LY . A 5LY 605 1_555 ? ? ? ? D ? ? ? ? ? ? ? 2.025 ? # _chem_comp.formula 'C19 H17 Cl2 N3 O3' _chem_comp.formula_weight 406.263 _chem_comp.id 5LW _chem_comp.mon_nstd_flag . _chem_comp.name 1-[[(2~{S},4~{S})-2-[2-chloranyl-4-(4-chloranylphenoxy)phenyl]-4-methyl-1,3-dioxolan-2-yl]methyl]-1,2,4-triazole _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Difenoconazole # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL1 C13 5LW sing 1 n n C11 C13 5LW doub 2 n y C11 C10 5LW sing 3 n y C13 C14 5LW sing 4 n y C10 C9 5LW doub 5 n y C14 C18 5LW doub 6 n y C9 C18 5LW sing 7 n y C9 O8 5LW sing 8 n n O8 C5 5LW sing 9 n n C6 C5 5LW doub 10 n y C6 C7 5LW sing 11 n y C5 C4 5LW sing 12 n y CL2 C7 5LW sing 13 n n C7 C12 5LW doub 14 n y C4 C3 5LW doub 15 n y C12 C3 5LW sing 16 n y C12 C15 5LW sing 17 n n C40 C23 5LW sing 18 n n O17 C15 5LW sing 19 n n O17 C23 5LW sing 20 n n C15 O16 5LW sing 21 n n C15 C25 5LW sing 22 n n C23 C22 5LW sing 23 n n C22 O16 5LW sing 24 n n N29 N28 5LW sing 25 n y N29 C30 5LW doub 26 n y C25 N28 5LW sing 27 n n N28 C32 5LW sing 28 n y C30 N31 5LW sing 29 n y C32 N31 5LW doub 30 n y C3 H1 5LW sing 31 n n C4 H2 5LW sing 32 n n C6 H3 5LW sing 33 n n C10 H4 5LW sing 34 n n C11 H5 5LW sing 35 n n C14 H6 5LW sing 36 n n C18 H7 5LW sing 37 n n C22 H8 5LW sing 38 n n C22 H9 5LW sing 39 n n C23 H10 5LW sing 40 n n C25 H11 5LW sing 41 n n C25 H12 5LW sing 42 n n C30 H13 5LW sing 43 n n C32 H14 5LW sing 44 n n C40 H15 5LW sing 45 n n C40 H16 5LW sing 46 n n C40 H17 5LW sing 47 n n # _atom_sites.entry_id 5EAH _atom_sites.fract_transf_matrix[1][1] 0.012817 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001934 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014852 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012501 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 601 601 HEM HEM . C 3 5LZ A 1 602 1 5LZ DFC . D 4 5LW A 1 603 1 5LW DF4 . E 5 5LX A 1 604 1 5LX DF5 . F 6 5LY A 1 605 1 5LY DF6 . G 7 HOH A 1 701 5 HOH HOH . G 7 HOH A 2 702 8 HOH HOH . G 7 HOH A 3 703 11 HOH HOH . G 7 HOH A 4 704 40 HOH HOH . G 7 HOH A 5 705 19 HOH HOH . G 7 HOH A 6 706 37 HOH HOH . G 7 HOH A 7 707 24 HOH HOH . G 7 HOH A 8 708 25 HOH HOH . G 7 HOH A 9 709 6 HOH HOH . G 7 HOH A 10 710 1 HOH HOH . G 7 HOH A 11 711 28 HOH HOH . G 7 HOH A 12 712 27 HOH HOH . G 7 HOH A 13 713 20 HOH HOH . G 7 HOH A 14 714 15 HOH HOH . G 7 HOH A 15 715 3 HOH HOH . G 7 HOH A 16 716 9 HOH HOH . G 7 HOH A 17 717 2 HOH HOH . G 7 HOH A 18 718 38 HOH HOH . G 7 HOH A 19 719 10 HOH HOH . G 7 HOH A 20 720 12 HOH HOH . G 7 HOH A 21 721 4 HOH HOH . G 7 HOH A 22 722 32 HOH HOH . G 7 HOH A 23 723 7 HOH HOH . G 7 HOH A 24 724 17 HOH HOH . G 7 HOH A 25 725 13 HOH HOH . G 7 HOH A 26 726 31 HOH HOH . G 7 HOH A 27 727 21 HOH HOH . G 7 HOH A 28 728 34 HOH HOH . G 7 HOH A 29 729 16 HOH HOH . G 7 HOH A 30 730 22 HOH HOH . G 7 HOH A 31 731 29 HOH HOH . G 7 HOH A 32 732 42 HOH HOH . G 7 HOH A 33 733 30 HOH HOH . G 7 HOH A 34 734 44 HOH HOH . G 7 HOH A 35 735 23 HOH HOH . G 7 HOH A 36 736 41 HOH HOH . G 7 HOH A 37 737 39 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C7 5LW . B . D 4 23.614 12.38 14.082 0.29 42.97 ? C7 5LW 603 A 1 HETATM 2 C C5 5LW . B . D 4 25.721 11.874 13.076 0.29 41.42 ? C5 5LW 603 A 1 HETATM 3 C C3 5LW . B . D 4 25.216 11.083 15.274 0.29 41.26 ? C3 5LW 603 A 1 HETATM 4 C C4 5LW . B . D 4 26.097 11.186 14.216 0.29 41.54 ? C4 5LW 603 A 1 HETATM 5 C C6 5LW . B . D 4 24.477 12.477 13.007 0.29 42.43 ? C6 5LW 603 A 1 HETATM 6 C C9 5LW . B . D 4 27.557 11.128 11.642 0.29 39.3 ? C9 5LW 603 A 1 HETATM 7 O O8 5LW . B . D 4 26.519 12.015 11.936 0.29 42.09 ? O8 5LW 603 A 1 HETATM 8 C C10 5LW . B . D 4 28.756 11.686 11.231 0.29 39.42 ? C10 5LW 603 A 1 HETATM 9 C C11 5LW . B . D 4 29.834 10.871 10.949 0.29 38.85 ? C11 5LW 603 A 1 HETATM 10 C C12 5LW . B . D 4 23.959 11.671 15.234 0.29 41.85 ? C12 5LW 603 A 1 HETATM 11 C C13 5LW . B . D 4 29.702 9.508 11.085 0.29 38.39 ? C13 5LW 603 A 1 HETATM 12 C C14 5LW . B . D 4 28.511 8.937 11.474 0.29 39.08 ? C14 5LW 603 A 1 HETATM 13 C C15 5LW . B . D 4 23.04 11.53 16.41 0.29 42.54 ? C15 5LW 603 A 1 HETATM 14 O O16 5LW . B . D 4 23.419 10.39 17.172 0.29 44.91 ? O16 5LW 603 A 1 HETATM 15 O O17 5LW . B . D 4 21.674 11.334 16.045 0.29 43.58 ? O17 5LW 603 A 1 HETATM 16 C C18 5LW . B . D 4 27.43 9.752 11.751 0.29 39.51 ? C18 5LW 603 A 1 HETATM 17 CL CL1 5LW . B . D 4 31.079 8.486 10.788 0.29 48.04 ? CL1 5LW 603 A 1 HETATM 18 CL CL2 5LW . B . D 4 22.099 13.21 13.956 0.29 46.31 ? CL2 5LW 603 A 1 HETATM 19 C C22 5LW . B . D 4 22.444 9.385 16.958 0.29 45.26 ? C22 5LW 603 A 1 HETATM 20 C C23 5LW . B . D 4 21.175 10.177 16.751 0.29 43.67 ? C23 5LW 603 A 1 HETATM 21 C C25 5LW . B . D 4 23.024 12.794 17.323 0.29 42.17 ? C25 5LW 603 A 1 HETATM 22 N N28 5LW . B . D 4 24.377 13.07 17.77 0.29 43.91 ? N28 5LW 603 A 1 HETATM 23 N N29 5LW . B . D 4 25.115 14.064 17.214 0.29 42.12 ? N29 5LW 603 A 1 HETATM 24 C C30 5LW . B . D 4 26.264 13.939 17.836 0.29 42.33 ? C30 5LW 603 A 1 HETATM 25 N N31 5LW . B . D 4 26.32 12.947 18.751 0.29 43.46 ? N31 5LW 603 A 1 HETATM 26 C C32 5LW . B . D 4 25.113 12.433 18.678 0.29 42.52 ? C32 5LW 603 A 1 HETATM 27 C C40 5LW . B . D 4 20.143 9.481 15.901 0.29 43.44 ? C40 5LW 603 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 335 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 27 #