data_5EAH # _model_server_result.job_id GuhhXGVlbtHnvWGrV8RAVA _model_server_result.datetime_utc '2024-11-12 21:03:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5eah # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":605}' # _entry.id 5EAH # _exptl.entry_id 5EAH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 406.263 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-[[(2~{R},4~{R})-2-[2-chloranyl-4-(4-chloranylphenoxy)phenyl]-4-methyl-1,3-dioxolan-2-yl]methyl]-1,2,4-triazole _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.58 _cell.angle_gamma 90 _cell.entry_id 5EAH _cell.length_a 78.02 _cell.length_b 67.33 _cell.length_c 80.9 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5EAH _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 470 A CYS 470 1_555 B FE HEM . A HEM 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? metalc ? metalc2 B FE HEM . A HEM 601 1_555 C N31 5LZ . A 5LZ 602 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.151 ? metalc ? metalc3 B FE HEM . A HEM 601 1_555 D N31 5LW . A 5LW 603 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.996 ? metalc ? metalc4 B FE HEM . A HEM 601 1_555 E N31 5LX . A 5LX 604 1_555 ? ? ? ? C ? ? ? ? ? ? ? 2.014 ? metalc ? metalc5 B FE HEM . A HEM 601 1_555 F N31 5LY . A 5LY 605 1_555 ? ? ? ? D ? ? ? ? ? ? ? 2.025 ? # _chem_comp.formula 'C19 H17 Cl2 N3 O3' _chem_comp.formula_weight 406.263 _chem_comp.id 5LY _chem_comp.mon_nstd_flag . _chem_comp.name 1-[[(2~{R},4~{R})-2-[2-chloranyl-4-(4-chloranylphenoxy)phenyl]-4-methyl-1,3-dioxolan-2-yl]methyl]-1,2,4-triazole _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Difenoconazole # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL1 C13 5LY sing 95 n n C14 C13 5LY doub 96 n y C14 C18 5LY sing 97 n y C13 C11 5LY sing 98 n y C18 C9 5LY doub 99 n y C11 C10 5LY doub 100 n y C9 C10 5LY sing 101 n y C9 O8 5LY sing 102 n n O8 C5 5LY sing 103 n n C6 C5 5LY doub 104 n y C6 C7 5LY sing 105 n y C5 C4 5LY sing 106 n y CL2 C7 5LY sing 107 n n C7 C12 5LY doub 108 n y C4 C3 5LY doub 109 n y C12 C3 5LY sing 110 n y C12 C15 5LY sing 111 n n O16 C22 5LY sing 112 n n O16 C15 5LY sing 113 n n C22 C23 5LY sing 114 n n C15 O17 5LY sing 115 n n C15 C25 5LY sing 116 n n O17 C23 5LY sing 117 n n N29 N28 5LY sing 118 n y N29 C30 5LY doub 119 n y C25 N28 5LY sing 120 n n C23 C40 5LY sing 121 n n N28 C32 5LY sing 122 n y C30 N31 5LY sing 123 n y C32 N31 5LY doub 124 n y C4 H1 5LY sing 125 n n C22 H2 5LY sing 126 n n C22 H3 5LY sing 127 n n C25 H4 5LY sing 128 n n C25 H5 5LY sing 129 n n C23 H6 5LY sing 130 n n C14 H7 5LY sing 131 n n C11 H8 5LY sing 132 n n C30 H9 5LY sing 133 n n C32 H10 5LY sing 134 n n C3 H11 5LY sing 135 n n C6 H12 5LY sing 136 n n C10 H13 5LY sing 137 n n C18 H14 5LY sing 138 n n C40 H15 5LY sing 139 n n C40 H16 5LY sing 140 n n C40 H17 5LY sing 141 n n # _atom_sites.entry_id 5EAH _atom_sites.fract_transf_matrix[1][1] 0.012817 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001934 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014852 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012501 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 601 601 HEM HEM . C 3 5LZ A 1 602 1 5LZ DFC . D 4 5LW A 1 603 1 5LW DF4 . E 5 5LX A 1 604 1 5LX DF5 . F 6 5LY A 1 605 1 5LY DF6 . G 7 HOH A 1 701 5 HOH HOH . G 7 HOH A 2 702 8 HOH HOH . G 7 HOH A 3 703 11 HOH HOH . G 7 HOH A 4 704 40 HOH HOH . G 7 HOH A 5 705 19 HOH HOH . G 7 HOH A 6 706 37 HOH HOH . G 7 HOH A 7 707 24 HOH HOH . G 7 HOH A 8 708 25 HOH HOH . G 7 HOH A 9 709 6 HOH HOH . G 7 HOH A 10 710 1 HOH HOH . G 7 HOH A 11 711 28 HOH HOH . G 7 HOH A 12 712 27 HOH HOH . G 7 HOH A 13 713 20 HOH HOH . G 7 HOH A 14 714 15 HOH HOH . G 7 HOH A 15 715 3 HOH HOH . G 7 HOH A 16 716 9 HOH HOH . G 7 HOH A 17 717 2 HOH HOH . G 7 HOH A 18 718 38 HOH HOH . G 7 HOH A 19 719 10 HOH HOH . G 7 HOH A 20 720 12 HOH HOH . G 7 HOH A 21 721 4 HOH HOH . G 7 HOH A 22 722 32 HOH HOH . G 7 HOH A 23 723 7 HOH HOH . G 7 HOH A 24 724 17 HOH HOH . G 7 HOH A 25 725 13 HOH HOH . G 7 HOH A 26 726 31 HOH HOH . G 7 HOH A 27 727 21 HOH HOH . G 7 HOH A 28 728 34 HOH HOH . G 7 HOH A 29 729 16 HOH HOH . G 7 HOH A 30 730 22 HOH HOH . G 7 HOH A 31 731 29 HOH HOH . G 7 HOH A 32 732 42 HOH HOH . G 7 HOH A 33 733 30 HOH HOH . G 7 HOH A 34 734 44 HOH HOH . G 7 HOH A 35 735 23 HOH HOH . G 7 HOH A 36 736 41 HOH HOH . G 7 HOH A 37 737 39 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 5LY . D . F 6 25.967 11.071 14.153 0.41 41.67 ? C4 5LY 605 A 1 HETATM 2 C C5 5LY . D . F 6 25.803 11.943 13.09 0.41 41.84 ? C5 5LY 605 A 1 HETATM 3 C C7 5LY . D . F 6 23.839 12.825 14.121 0.41 42.9 ? C7 5LY 605 A 1 HETATM 4 C C13 5LY . D . F 6 29.737 9.465 11.095 0.41 38.49 ? C13 5LY 605 A 1 HETATM 5 C C22 5LY . D . F 6 20.94 10.601 16.255 0.41 44.44 ? C22 5LY 605 A 1 HETATM 6 C C25 5LY . D . F 6 22.966 12.971 17.268 0.41 41.97 ? C25 5LY 605 A 1 HETATM 7 C C23 5LY . D . F 6 21.786 10.204 17.441 0.41 43.06 ? C23 5LY 605 A 1 HETATM 8 C C14 5LY . D . F 6 29.855 10.825 10.922 0.41 38.63 ? C14 5LY 605 A 1 HETATM 9 C C12 5LY . D . F 6 23.948 11.917 15.176 0.41 41.84 ? C12 5LY 605 A 1 HETATM 10 C C11 5LY . D . F 6 28.556 8.893 11.512 0.41 39 ? C11 5LY 605 A 1 HETATM 11 C C9 5LY . D . F 6 27.585 11.079 11.637 0.41 39.67 ? C9 5LY 605 A 1 HETATM 12 C C30 5LY . D . F 6 26.315 13.782 17.72 0.41 42.32 ? C30 5LY 605 A 1 HETATM 13 C C32 5LY . D . F 6 25.071 12.303 18.477 0.41 42.55 ? C32 5LY 605 A 1 HETATM 14 C C3 5LY . D . F 6 25.04 11.06 15.177 0.41 41.29 ? C3 5LY 605 A 1 HETATM 15 C C6 5LY . D . F 6 24.749 12.84 13.084 0.41 42.19 ? C6 5LY 605 A 1 HETATM 16 O O8 5LY . D . F 6 26.556 11.98 11.912 0.41 42.12 ? O8 5LY 605 A 1 HETATM 17 C C10 5LY . D . F 6 27.471 9.705 11.782 0.41 38.88 ? C10 5LY 605 A 1 HETATM 18 C C15 5LY . D . F 6 22.93 11.78 16.256 0.41 42.29 ? C15 5LY 605 A 1 HETATM 19 O O16 5LY . D . F 6 21.614 11.738 15.721 0.41 43.1 ? O16 5LY 605 A 1 HETATM 20 O O17 5LY . D . F 6 23.104 10.571 16.984 0.41 44.71 ? O17 5LY 605 A 1 HETATM 21 C C18 5LY . D . F 6 28.772 11.637 11.196 0.41 39.41 ? C18 5LY 605 A 1 HETATM 22 CL CL1 5LY . D . F 6 31.121 8.451 10.811 0.41 48.12 ? CL1 5LY 605 A 1 HETATM 23 CL CL2 5LY . D . F 6 22.568 14.002 14.071 0.41 45.48 ? CL2 5LY 605 A 1 HETATM 24 N N28 5LY . D . F 6 24.357 13.094 17.683 0.41 43.9 ? N28 5LY 605 A 1 HETATM 25 N N29 5LY . D . F 6 25.151 14.074 17.185 0.41 42.15 ? N29 5LY 605 A 1 HETATM 26 N N31 5LY . D . F 6 26.324 12.698 18.526 0.41 43.64 ? N31 5LY 605 A 1 HETATM 27 C C40 5LY . D . F 6 21.783 8.727 17.727 0.41 47.21 ? C40 5LY 605 A 1 # _model_server_stats.io_time_ms 71 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 27 #