data_5EAI
#
_model_server_result.job_id            PGUjrbagdDWdAWq21l4Now 
_model_server_result.datetime_utc      '2024-12-18 01:41:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5eai 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"AA","auth_seq_id":301}' 
#
_entry.id    5EAI 
#
_exptl.entry_id    5EAI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    14 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5EAI 
_cell.length_a            95.6 
_cell.length_b            210.77 
_cell.length_c            228.08 
_cell.Z_PDB               56 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5EAI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
PISA dimeric 2 author_and_software_defined_assembly 4 
PISA dimeric 2 author_and_software_defined_assembly 5 
PISA dimeric 2 author_and_software_defined_assembly 6 
PISA dimeric 2 author_and_software_defined_assembly 7 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,O,P,Q,HA,IA 1 1 
C,D,R,S,JA,KA 2 1 
E,F,T,U,V,LA,MA 3 1 
G,H,W,X,Y,NA,OA 4 1 
I,J,Z,AA,PA,QA 5 1 
K,L,BA,CA,DA,RA,SA 6 1 
M,N,EA,FA,GA,TA,UA 7 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 O N N 
? 2 P N N 
? 2 R N N 
? 2 S N N 
? 2 T N N 
? 2 V N N 
? 2 W N N 
? 2 X N N 
? 2 Z N N 
? 2 AA N N 
? 2 BA N N 
? 2 DA N N 
? 2 EA N N 
? 2 GA N N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 125 n n 
PA O2A FAD sing 126 n n 
PA O5B FAD sing 127 n n 
PA O3P FAD sing 128 n n 
O2A HOA2 FAD sing 129 n n 
O5B C5B FAD sing 130 n n 
C5B C4B FAD sing 131 n n 
C5B H51A FAD sing 132 n n 
C5B H52A FAD sing 133 n n 
C4B O4B FAD sing 134 n n 
C4B C3B FAD sing 135 n n 
C4B H4B FAD sing 136 n n 
O4B C1B FAD sing 137 n n 
C3B O3B FAD sing 138 n n 
C3B C2B FAD sing 139 n n 
C3B H3B FAD sing 140 n n 
O3B HO3A FAD sing 141 n n 
C2B O2B FAD sing 142 n n 
C2B C1B FAD sing 143 n n 
C2B H2B FAD sing 144 n n 
O2B HO2A FAD sing 145 n n 
C1B N9A FAD sing 146 n n 
C1B H1B FAD sing 147 n n 
N9A C8A FAD sing 148 n y 
N9A C4A FAD sing 149 n y 
C8A N7A FAD doub 150 n y 
C8A H8A FAD sing 151 n n 
N7A C5A FAD sing 152 n y 
C5A C6A FAD sing 153 n y 
C5A C4A FAD doub 154 n y 
C6A N6A FAD sing 155 n n 
C6A N1A FAD doub 156 n y 
N6A H61A FAD sing 157 n n 
N6A H62A FAD sing 158 n n 
N1A C2A FAD sing 159 n y 
C2A N3A FAD doub 160 n y 
C2A H2A FAD sing 161 n n 
N3A C4A FAD sing 162 n y 
N1 C2 FAD sing 163 n n 
N1 C10 FAD doub 164 n n 
C2 O2 FAD doub 165 n n 
C2 N3 FAD sing 166 n n 
N3 C4 FAD sing 167 n n 
N3 HN3 FAD sing 168 n n 
C4 O4 FAD doub 169 n n 
C4 C4X FAD sing 170 n n 
C4X N5 FAD doub 171 n n 
C4X C10 FAD sing 172 n n 
N5 C5X FAD sing 173 n n 
C5X C6 FAD doub 174 n y 
C5X C9A FAD sing 175 n y 
C6 C7 FAD sing 176 n y 
C6 H6 FAD sing 177 n n 
C7 C7M FAD sing 178 n n 
C7 C8 FAD doub 179 n y 
C7M HM71 FAD sing 180 n n 
C7M HM72 FAD sing 181 n n 
C7M HM73 FAD sing 182 n n 
C8 C8M FAD sing 183 n n 
C8 C9 FAD sing 184 n y 
C8M HM81 FAD sing 185 n n 
C8M HM82 FAD sing 186 n n 
C8M HM83 FAD sing 187 n n 
C9 C9A FAD doub 188 n y 
C9 H9 FAD sing 189 n n 
C9A N10 FAD sing 190 n n 
N10 C10 FAD sing 191 n n 
N10 C1' FAD sing 192 n n 
C1' C2' FAD sing 193 n n 
C1' "H1'1" FAD sing 194 n n 
C1' "H1'2" FAD sing 195 n n 
C2' O2' FAD sing 196 n n 
C2' C3' FAD sing 197 n n 
C2' H2' FAD sing 198 n n 
O2' HO2' FAD sing 199 n n 
C3' O3' FAD sing 200 n n 
C3' C4' FAD sing 201 n n 
C3' H3' FAD sing 202 n n 
O3' HO3' FAD sing 203 n n 
C4' O4' FAD sing 204 n n 
C4' C5' FAD sing 205 n n 
C4' H4' FAD sing 206 n n 
O4' HO4' FAD sing 207 n n 
C5' O5' FAD sing 208 n n 
C5' "H5'1" FAD sing 209 n n 
C5' "H5'2" FAD sing 210 n n 
O5' P FAD sing 211 n n 
P O1P FAD doub 212 n n 
P O2P FAD sing 213 n n 
P O3P FAD sing 214 n n 
O2P HOP2 FAD sing 215 n n 
#
_atom_sites.entry_id                     5EAI 
_atom_sites.fract_transf_matrix[1][1]    0.01046 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.004745 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004384 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
O 2 FAD A 1 601 601 FAD FAD . 
P 2 FAD B 1 301 603 FAD FAD . 
Q 3 E6A B 1 302 5 E6A E6A . 
R 2 FAD C 1 601 601 FAD FAD . 
S 2 FAD D 1 301 603 FAD FAD . 
T 2 FAD E 1 601 601 FAD FAD . 
U 3 E6A E 1 602 1 E6A E6A . 
V 2 FAD F 1 301 603 FAD FAD . 
W 2 FAD G 1 601 601 FAD FAD . 
X 2 FAD H 1 301 603 FAD FAD . 
Y 3 E6A H 1 302 2 E6A E6A . 
Z 2 FAD I 1 601 601 FAD FAD . 
AA 2 FAD J 1 301 603 FAD FAD . 
BA 2 FAD K 1 601 601 FAD FAD . 
CA 3 E6A K 1 602 3 E6A E6A . 
DA 2 FAD L 1 301 603 FAD FAD . 
EA 2 FAD M 1 601 601 FAD FAD . 
FA 3 E6A M 1 602 4 E6A E6A . 
GA 2 FAD N 1 301 603 FAD FAD . 
HA 4 HOH A 1 701 637 HOH HOH . 
HA 4 HOH A 2 702 618 HOH HOH . 
HA 4 HOH A 3 703 615 HOH HOH . 
HA 4 HOH A 4 704 629 HOH HOH . 
IA 4 HOH B 1 401 595 HOH HOH . 
IA 4 HOH B 2 402 631 HOH HOH . 
IA 4 HOH B 3 403 4 HOH HOH . 
IA 4 HOH B 4 404 609 HOH HOH . 
JA 4 HOH C 1 701 3 HOH HOH . 
KA 4 HOH D 1 401 628 HOH HOH . 
KA 4 HOH D 2 402 1 HOH HOH . 
KA 4 HOH D 3 403 613 HOH HOH . 
KA 4 HOH D 4 404 598 HOH HOH . 
LA 4 HOH E 1 701 623 HOH HOH . 
LA 4 HOH E 2 702 2 HOH HOH . 
LA 4 HOH E 3 703 599 HOH HOH . 
LA 4 HOH E 4 704 419 HOH HOH . 
LA 4 HOH E 5 705 606 HOH HOH . 
LA 4 HOH E 6 706 636 HOH HOH . 
MA 4 HOH F 1 401 602 HOH HOH . 
MA 4 HOH F 2 402 634 HOH HOH . 
NA 4 HOH G 1 701 608 HOH HOH . 
OA 4 HOH H 1 401 638 HOH HOH . 
OA 4 HOH H 2 402 632 HOH HOH . 
OA 4 HOH H 3 403 605 HOH HOH . 
PA 4 HOH I 1 701 627 HOH HOH . 
PA 4 HOH I 2 702 625 HOH HOH . 
PA 4 HOH I 3 703 6 HOH HOH . 
PA 4 HOH I 4 704 600 HOH HOH . 
PA 4 HOH I 5 705 594 HOH HOH . 
PA 4 HOH I 6 706 121 HOH HOH . 
PA 4 HOH I 7 707 596 HOH HOH . 
PA 4 HOH I 8 708 601 HOH HOH . 
QA 4 HOH J 1 401 626 HOH HOH . 
QA 4 HOH J 2 402 610 HOH HOH . 
QA 4 HOH J 3 403 639 HOH HOH . 
QA 4 HOH J 4 404 645 HOH HOH . 
RA 4 HOH K 1 701 624 HOH HOH . 
RA 4 HOH K 2 702 607 HOH HOH . 
RA 4 HOH K 3 703 603 HOH HOH . 
SA 4 HOH L 1 401 633 HOH HOH . 
SA 4 HOH L 2 402 616 HOH HOH . 
SA 4 HOH L 3 403 641 HOH HOH . 
SA 4 HOH L 4 404 640 HOH HOH . 
TA 4 HOH M 1 701 620 HOH HOH . 
TA 4 HOH M 2 702 619 HOH HOH . 
TA 4 HOH M 3 703 622 HOH HOH . 
UA 4 HOH N 1 401 611 HOH HOH . 
UA 4 HOH N 2 402 630 HOH HOH . 
UA 4 HOH N 3 403 614 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . AA 2 -43.791 -19.776 -91.673 1 73.67 ? PA FAD 301 J 1 
HETATM 2 O O1A FAD . . . AA 2 -44.331 -19.715 -90.293 1 75.6 ? O1A FAD 301 J 1 
HETATM 3 O O2A FAD . . . AA 2 -43.432 -18.36 -92.146 1 74.3 ? O2A FAD 301 J 1 
HETATM 4 O O5B FAD . . . AA 2 -42.496 -20.725 -91.811 1 77.19 ? O5B FAD 301 J 1 
HETATM 5 C C5B FAD . . . AA 2 -42.128 -21.213 -93.119 1 79.46 ? C5B FAD 301 J 1 
HETATM 6 C C4B FAD . . . AA 2 -40.644 -21.073 -93.384 1 82.81 ? C4B FAD 301 J 1 
HETATM 7 O O4B FAD . . . AA 2 -40.434 -20.978 -94.811 1 84.4 ? O4B FAD 301 J 1 
HETATM 8 C C3B FAD . . . AA 2 -39.928 -19.862 -92.78 1 83.71 ? C3B FAD 301 J 1 
HETATM 9 O O3B FAD . . . AA 2 -38.576 -20.16 -92.433 1 83.13 ? O3B FAD 301 J 1 
HETATM 10 C C2B FAD . . . AA 2 -39.991 -18.848 -93.919 1 85.83 ? C2B FAD 301 J 1 
HETATM 11 O O2B FAD . . . AA 2 -39.015 -17.82 -93.795 1 90.72 ? O2B FAD 301 J 1 
HETATM 12 C C1B FAD . . . AA 2 -39.761 -19.77 -95.117 1 84.68 ? C1B FAD 301 J 1 
HETATM 13 N N9A FAD . . . AA 2 -40.253 -19.281 -96.402 1 82.83 ? N9A FAD 301 J 1 
HETATM 14 C C8A FAD . . . AA 2 -41.119 -18.242 -96.627 1 83.41 ? C8A FAD 301 J 1 
HETATM 15 N N7A FAD . . . AA 2 -41.271 -17.936 -97.893 1 84.39 ? N7A FAD 301 J 1 
HETATM 16 C C5A FAD . . . AA 2 -40.459 -18.848 -98.551 1 84.18 ? C5A FAD 301 J 1 
HETATM 17 C C6A FAD . . . AA 2 -40.139 -19.025 -99.914 1 84.49 ? C6A FAD 301 J 1 
HETATM 18 N N6A FAD . . . AA 2 -40.547 -18.2 -100.887 1 82.78 ? N6A FAD 301 J 1 
HETATM 19 N N1A FAD . . . AA 2 -39.295 -20.036 -100.233 1 85.88 ? N1A FAD 301 J 1 
HETATM 20 C C2A FAD . . . AA 2 -38.798 -20.798 -99.249 1 84.56 ? C2A FAD 301 J 1 
HETATM 21 N N3A FAD . . . AA 2 -39.005 -20.706 -97.932 1 82.51 ? N3A FAD 301 J 1 
HETATM 22 C C4A FAD . . . AA 2 -39.844 -19.699 -97.645 1 82.67 ? C4A FAD 301 J 1 
HETATM 23 N N1 FAD . . . AA 2 -50.407 -26.686 -86.531 1 66.16 ? N1 FAD 301 J 1 
HETATM 24 C C2 FAD . . . AA 2 -50.909 -27.958 -86.524 1 65.02 ? C2 FAD 301 J 1 
HETATM 25 O O2 FAD . . . AA 2 -50.24 -28.918 -86.911 1 64.22 ? O2 FAD 301 J 1 
HETATM 26 N N3 FAD . . . AA 2 -52.198 -28.189 -86.038 1 66.34 ? N3 FAD 301 J 1 
HETATM 27 C C4 FAD . . . AA 2 -53.059 -27.227 -85.518 1 66.56 ? C4 FAD 301 J 1 
HETATM 28 O O4 FAD . . . AA 2 -54.208 -27.523 -85.182 1 65.09 ? O4 FAD 301 J 1 
HETATM 29 C C4X FAD . . . AA 2 -52.51 -25.895 -85.488 1 67.13 ? C4X FAD 301 J 1 
HETATM 30 N N5 FAD . . . AA 2 -53.25 -24.934 -84.996 1 66.74 ? N5 FAD 301 J 1 
HETATM 31 C C5X FAD . . . AA 2 -52.739 -23.646 -85.018 1 67.11 ? C5X FAD 301 J 1 
HETATM 32 C C6 FAD . . . AA 2 -53.54 -22.603 -84.548 1 66.56 ? C6 FAD 301 J 1 
HETATM 33 C C7 FAD . . . AA 2 -53.119 -21.279 -84.612 1 67.31 ? C7 FAD 301 J 1 
HETATM 34 C C7M FAD . . . AA 2 -53.999 -20.207 -84.022 1 67.69 ? C7M FAD 301 J 1 
HETATM 35 C C8 FAD . . . AA 2 -51.85 -20.982 -85.173 1 70.68 ? C8 FAD 301 J 1 
HETATM 36 C C8M FAD . . . AA 2 -51.397 -19.561 -85.422 1 73.16 ? C8M FAD 301 J 1 
HETATM 37 C C9 FAD . . . AA 2 -51.033 -22.026 -85.593 1 69.62 ? C9 FAD 301 J 1 
HETATM 38 C C9A FAD . . . AA 2 -51.464 -23.352 -85.541 1 67.17 ? C9A FAD 301 J 1 
HETATM 39 N N10 FAD . . . AA 2 -50.688 -24.426 -86.058 1 63.2 ? N10 FAD 301 J 1 
HETATM 40 C C10 FAD . . . AA 2 -51.167 -25.707 -86.038 1 66.15 ? C10 FAD 301 J 1 
HETATM 41 C C1' FAD . . . AA 2 -49.384 -24.166 -86.696 1 57.37 ? C1' FAD 301 J 1 
HETATM 42 C C2' FAD . . . AA 2 -49.495 -23.685 -88.138 1 54.62 ? C2' FAD 301 J 1 
HETATM 43 O O2' FAD . . . AA 2 -50.251 -24.608 -88.921 1 52.4 ? O2' FAD 301 J 1 
HETATM 44 C C3' FAD . . . AA 2 -48.115 -23.488 -88.767 1 57.57 ? C3' FAD 301 J 1 
HETATM 45 O O3' FAD . . . AA 2 -47.274 -22.745 -87.887 1 61.33 ? O3' FAD 301 J 1 
HETATM 46 C C4' FAD . . . AA 2 -48.126 -22.869 -90.164 1 59.32 ? C4' FAD 301 J 1 
HETATM 47 O O4' FAD . . . AA 2 -48.688 -23.826 -91.067 1 56.33 ? O4' FAD 301 J 1 
HETATM 48 C C5' FAD . . . AA 2 -46.766 -22.383 -90.617 1 63.93 ? C5' FAD 301 J 1 
HETATM 49 O O5' FAD . . . AA 2 -46.809 -22.044 -92.015 1 64.3 ? O5' FAD 301 J 1 
HETATM 50 P P FAD . . . AA 2 -46.499 -20.504 -92.419 1 63.31 ? P FAD 301 J 1 
HETATM 51 O O1P FAD . . . AA 2 -47.152 -20.142 -93.706 1 58.79 ? O1P FAD 301 J 1 
HETATM 52 O O2P FAD . . . AA 2 -46.894 -19.6 -91.252 1 61.12 ? O2P FAD 301 J 1 
HETATM 53 O O3P FAD . . . AA 2 -44.929 -20.349 -92.62 1 69.5 ? O3P FAD 301 J 1 
#
_model_server_stats.io_time_ms              262 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    189 
_model_server_stats.query_time_ms           381 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           53 
#