data_5EAK # _model_server_result.job_id 8Hcg-kCqjgRHrcCkmIQa3Q _model_server_result.datetime_utc '2025-04-06 18:43:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5eak # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1000}' # _entry.id 5EAK # _exptl.entry_id 5EAK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 421.519 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[(1S,2R)-2-aminocyclohexyl]-4-[6-(1-methyl-1H-pyrazol-4-yl)pyrazolo[1,5-a]pyrimidin-3-yl]thiophene-2-carboxamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5EAK _cell.length_a 118.739 _cell.length_b 118.739 _cell.length_c 106.592 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5EAK _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C21 H23 N7 O S' _chem_comp.formula_weight 421.519 _chem_comp.id 24R _chem_comp.mon_nstd_flag . _chem_comp.name N-[(1S,2R)-2-aminocyclohexyl]-4-[6-(1-methyl-1H-pyrazol-4-yl)pyrazolo[1,5-a]pyrimidin-3-yl]thiophene-2-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 24R doub 1 n y C N4 24R sing 2 n y C1 C2 24R sing 3 n y C1 C14 24R sing 4 n n C2 N 24R doub 5 n y N C3 24R sing 6 n y C3 N4 24R sing 7 n y C3 C6 24R doub 8 n y N4 N5 24R sing 9 n y N5 C7 24R doub 10 n y C6 C7 24R sing 11 n y C6 C8 24R sing 12 n n C8 C9 24R doub 13 n y C8 C11 24R sing 14 n y C9 S 24R sing 15 n y S C10 24R sing 16 n y C10 C11 24R doub 17 n y C10 C12 24R sing 18 n n C12 N13 24R sing 19 n n C12 O 24R doub 20 n n N13 C20 24R sing 21 n n C14 C15 24R doub 22 n y C14 C18 24R sing 23 n y C15 N16 24R sing 24 n y N16 N17 24R sing 25 n y N16 C19 24R sing 26 n n N17 C18 24R doub 27 n y C20 C21 24R sing 28 n n C20 C23 24R sing 29 n n C21 N22 24R sing 30 n n C21 C26 24R sing 31 n n C23 C24 24R sing 32 n n C24 C25 24R sing 33 n n C25 C26 24R sing 34 n n C H 24R sing 35 n n C2 H2 24R sing 36 n n C7 H7 24R sing 37 n n C9 H9 24R sing 38 n n C11 H11 24R sing 39 n n N13 HN13 24R sing 40 n n C15 H15 24R sing 41 n n C18 H18 24R sing 42 n n C19 H19 24R sing 43 n n C19 H19A 24R sing 44 n n C19 H19B 24R sing 45 n n C20 H20 24R sing 46 n n C21 H21 24R sing 47 n n N22 HN22 24R sing 48 n n N22 HN2A 24R sing 49 n n C23 H23 24R sing 50 n n C23 H23A 24R sing 51 n n C24 H24 24R sing 52 n n C24 H24A 24R sing 53 n n C25 H25 24R sing 54 n n C25 H25A 24R sing 55 n n C26 H26 24R sing 56 n n C26 H26A 24R sing 57 n n # _atom_sites.entry_id 5EAK _atom_sites.fract_transf_matrix[1][1] 0.008422 _atom_sites.fract_transf_matrix[1][2] 0.004862 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009725 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009382 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 24R A 1 1000 1000 24R 24R . D 2 24R B 1 1000 1000 24R 24R . E 3 HOH A 1 1101 4 HOH HOH . E 3 HOH A 2 1102 6 HOH HOH . E 3 HOH A 3 1103 1 HOH HOH . F 3 HOH B 1 1101 5 HOH HOH . F 3 HOH B 2 1102 3 HOH HOH . F 3 HOH B 3 1103 2 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C 24R . . . C 2 42.178 37.004 -1.243 1 28.03 ? C 24R 1000 A 1 HETATM 2 C C1 24R . . . C 2 42.466 37.075 0.11 1 33.46 ? C1 24R 1000 A 1 HETATM 3 C C2 24R . . . C 2 42.427 35.838 0.743 1 28.2 ? C2 24R 1000 A 1 HETATM 4 N N 24R . . . C 2 42.171 34.652 0.174 1 26.89 ? N 24R 1000 A 1 HETATM 5 C C3 24R . . . C 2 41.912 34.67 -1.149 1 26.71 ? C3 24R 1000 A 1 HETATM 6 N N4 24R . . . C 2 41.916 35.829 -1.847 1 25.75 ? N4 24R 1000 A 1 HETATM 7 N N5 24R . . . C 2 41.637 35.651 -3.142 1 28.14 ? N5 24R 1000 A 1 HETATM 8 C C6 24R . . . C 2 41.608 33.651 -2.054 1 28.45 ? C6 24R 1000 A 1 HETATM 9 C C7 24R . . . C 2 41.439 34.322 -3.265 1 27.77 ? C7 24R 1000 A 1 HETATM 10 C C8 24R . . . C 2 41.447 32.176 -1.834 1 24.85 ? C8 24R 1000 A 1 HETATM 11 C C9 24R . . . C 2 41.276 31.271 -2.866 1 22.68 ? C9 24R 1000 A 1 HETATM 12 S S 24R . . . C 2 41.087 29.669 -2.29 1 28.19 ? S 24R 1000 A 1 HETATM 13 C C10 24R . . . C 2 41.234 30.163 -0.658 1 25.44 ? C10 24R 1000 A 1 HETATM 14 C C11 24R . . . C 2 41.416 31.542 -0.577 1 24.54 ? C11 24R 1000 A 1 HETATM 15 C C12 24R . . . C 2 41.154 29.138 0.422 1 26.32 ? C12 24R 1000 A 1 HETATM 16 N N13 24R . . . C 2 41.54 29.471 1.646 1 30.32 ? N13 24R 1000 A 1 HETATM 17 O O 24R . . . C 2 40.758 28.013 0.21 1 26.52 ? O 24R 1000 A 1 HETATM 18 C C14 24R . . . C 2 42.745 38.305 0.888 1 32.24 ? C14 24R 1000 A 1 HETATM 19 C C15 24R . . . C 2 42.903 39.605 0.436 1 27.06 ? C15 24R 1000 A 1 HETATM 20 N N16 24R . . . C 2 43.107 40.336 1.562 1 39.75 ? N16 24R 1000 A 1 HETATM 21 N N17 24R . . . C 2 43.086 39.643 2.702 1 35.04 ? N17 24R 1000 A 1 HETATM 22 C C18 24R . . . C 2 42.848 38.389 2.275 1 31.25 ? C18 24R 1000 A 1 HETATM 23 C C19 24R . . . C 2 43.34 41.775 1.65 1 40.56 ? C19 24R 1000 A 1 HETATM 24 C C20 24R . . . C 2 41.695 28.479 2.706 1 32.19 ? C20 24R 1000 A 1 HETATM 25 C C21 24R . . . C 2 40.773 28.72 3.919 1 34.28 ? C21 24R 1000 A 1 HETATM 26 N N22 24R . . . C 2 39.425 29.19 3.492 1 31.52 ? N22 24R 1000 A 1 HETATM 27 C C23 24R . . . C 2 43.175 28.431 3.104 1 33.91 ? C23 24R 1000 A 1 HETATM 28 C C24 24R . . . C 2 43.589 29.607 3.986 1 28.42 ? C24 24R 1000 A 1 HETATM 29 C C25 24R . . . C 2 42.747 29.593 5.254 1 29.37 ? C25 24R 1000 A 1 HETATM 30 C C26 24R . . . C 2 41.264 29.754 4.927 1 29.8 ? C26 24R 1000 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 30 #